Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

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The map label for this gene is 11496856

Identifier: 11496856

GI number: 11496856

Start: 25337

End: 26407

Strand: Reverse

Name: 11496856

Synonym: BBJ34

Alternate gene names: NA

Gene position: 26407-25337 (Counterclockwise)

Preceding gene: 11496858

Following gene: 11496854

Centisome position: 68.01

GC content: 32.31

Gene sequence:

>1071_bases
ATGATAAAAGGCAATACGTTTATTTTAATATTAGTAACAACAATGTTTGTATCATGCAAATTCTATGGAAGTGATGATAC
AAATAAAAAAAATACATCTCTAAATGGTGATACTAGAGAGATTGACAATATAGGTTCAGTCATTTTAGAACAAGACGGAA
ACAAAAAAGGTGATACTACTGCTAGTAAAGTTGCTTTGGATCAAGTTACAGAACATGCTAATAGTGAACTTATGCTTAAT
GATGACCCTGATTCTAGTATTAGTAAATACAACCAAGAAAATACTACTGGCAAATTAACCGAAGAAGATATGGATAAGCT
TAAGGCTTTTTTTGTAAAAACTATAACATATCAAGGGATACTCAATTCTATTTATAACAAATATACACGCTCTTATAATA
CCATTGCAACTTATTCTGGTTGTGCCAATTATAATAGTATTGGATGTTTTAGCGAGGGCCCTTCTGCAAGGCGTAGTCAA
GCCCTTAACGACCTAGAAAAAAATAAACTAGATGAAGAGTATACTAAACTTAACCAAATGCTAAAGGAGACTACACAAGA
TTATTGCCCCAAAGCTCTAGACAATGCAATTGAGGAATACAAGAGGGCTATAACAATAGCTAAAGAAGCTGAAGATAAAA
TAAAAAAAATAACAAGCTTTACAATAGATGAAGGCAATAATAATGAGGAAAGAAAAGAAAATGTAGATAACTTAAAAAAA
GTTAACAATATTCTTTCTATTTCCGAAAAGACCATAGAAACAGCTAGTGTGGCTTATGCCAATGCTTTTGCTGTTATAGT
ATCTAGATTATCTTCTGCCGAATTTATTACAGCTGTTAATGAATTTAAGGATGCTACTGAAAAGTATGCTAATGGCAATA
AAGGAGACCATGCTGTTGATGTTGTTGTGGGTGCTATTGCAGGCATAGCTTTTGATAATGAGAATAGATTTGAAAGAGCC
AAAATGTTTGCTAATAAGGAAAAAGGTGCGGAGGTAGACAAAATGATTGCTGCCATTGAGAAGCTAAGAGCTACTTATAC
TGCAGTTAAGCCTAAAAATAAAGATAAATAA

Upstream 100 bases:

>100_bases
TTTCATTATACAGAATAAAGCAATATAATATATTTAATATATATTATCGCTTAAATTTATTTAAACTTAATAAATAAATT
AAGGGGAGAATAAAAAAAGA

Downstream 100 bases:

>100_bases
ATAATAAATGTAATAACTGGGAAAATACAGAGAATATTCTTAAGCATTTTCTATTGAGCTTTTTGTATACATAATTTATT
TTGGTTATGTTTTATTATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MIKGNTFILILVTTMFVSCKFYGSDDTNKKNTSLNGDTREIDNIGSVILEQDGNKKGDTTASKVALDQVTEHANSELMLN
DDPDSSISKYNQENTTGKLTEEDMDKLKAFFVKTITYQGILNSIYNKYTRSYNTIATYSGCANYNSIGCFSEGPSARRSQ
ALNDLEKNKLDEEYTKLNQMLKETTQDYCPKALDNAIEEYKRAITIAKEAEDKIKKITSFTIDEGNNNEERKENVDNLKK
VNNILSISEKTIETASVAYANAFAVIVSRLSSAEFITAVNEFKDATEKYANGNKGDHAVDVVVGAIAGIAFDNENRFERA
KMFANKEKGAEVDKMIAAIEKLRATYTAVKPKNKDK

Sequences:

>Translated_356_residues
MIKGNTFILILVTTMFVSCKFYGSDDTNKKNTSLNGDTREIDNIGSVILEQDGNKKGDTTASKVALDQVTEHANSELMLN
DDPDSSISKYNQENTTGKLTEEDMDKLKAFFVKTITYQGILNSIYNKYTRSYNTIATYSGCANYNSIGCFSEGPSARRSQ
ALNDLEKNKLDEEYTKLNQMLKETTQDYCPKALDNAIEEYKRAITIAKEAEDKIKKITSFTIDEGNNNEERKENVDNLKK
VNNILSISEKTIETASVAYANAFAVIVSRLSSAEFITAVNEFKDATEKYANGNKGDHAVDVVVGAIAGIAFDNENRFERA
KMFANKEKGAEVDKMIAAIEKLRATYTAVKPKNKDK
>Mature_356_residues
MIKGNTFILILVTTMFVSCKFYGSDDTNKKNTSLNGDTREIDNIGSVILEQDGNKKGDTTASKVALDQVTEHANSELMLN
DDPDSSISKYNQENTTGKLTEEDMDKLKAFFVKTITYQGILNSIYNKYTRSYNTIATYSGCANYNSIGCFSEGPSARRSQ
ALNDLEKNKLDEEYTKLNQMLKETTQDYCPKALDNAIEEYKRAITIAKEAEDKIKKITSFTIDEGNNNEERKENVDNLKK
VNNILSISEKTIETASVAYANAFAVIVSRLSSAEFITAVNEFKDATEKYANGNKGDHAVDVVVGAIAGIAFDNENRFERA
KMFANKEKGAEVDKMIAAIEKLRATYTAVKPKNKDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39651; Mature: 39651

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKGNTFILILVTTMFVSCKFYGSDDTNKKNTSLNGDTREIDNIGSVILEQDGNKKGDTT
CCCCCEEHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCH
ASKVALDQVTEHANSELMLNDDPDSSISKYNQENTTGKLTEEDMDKLKAFFVKTITYQGI
HHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LNSIYNKYTRSYNTIATYSGCANYNSIGCFSEGPSARRSQALNDLEKNKLDEEYTKLNQM
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
LKETTQDYCPKALDNAIEEYKRAITIAKEAEDKIKKITSFTIDEGNNNEERKENVDNLKK
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
VNNILSISEKTIETASVAYANAFAVIVSRLSSAEFITAVNEFKDATEKYANGNKGDHAVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
VVVGAIAGIAFDNENRFERAKMFANKEKGAEVDKMIAAIEKLRATYTAVKPKNKDK
HHHHHHHHHEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIKGNTFILILVTTMFVSCKFYGSDDTNKKNTSLNGDTREIDNIGSVILEQDGNKKGDTT
CCCCCEEHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCH
ASKVALDQVTEHANSELMLNDDPDSSISKYNQENTTGKLTEEDMDKLKAFFVKTITYQGI
HHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LNSIYNKYTRSYNTIATYSGCANYNSIGCFSEGPSARRSQALNDLEKNKLDEEYTKLNQM
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
LKETTQDYCPKALDNAIEEYKRAITIAKEAEDKIKKITSFTIDEGNNNEERKENVDNLKK
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH
VNNILSISEKTIETASVAYANAFAVIVSRLSSAEFITAVNEFKDATEKYANGNKGDHAVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
VVVGAIAGIAFDNENRFERAKMFANKEKGAEVDKMIAAIEKLRATYTAVKPKNKDK
HHHHHHHHHEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA