Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

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The map label for this gene is 11496850

Identifier: 11496850

GI number: 11496850

Start: 21220

End: 21948

Strand: Direct

Name: 11496850

Synonym: BBJ28

Alternate gene names: NA

Gene position: 21220-21948 (Clockwise)

Preceding gene: 11496870

Following gene: 11496851

Centisome position: 54.65

GC content: 24.14

Gene sequence:

>729_bases
ATGATGCTTAAGATTTTTGTAATTGTTTTCAATTTTTGTGTTTTAAATTTGTTAAATGCTGGAGATGGGAAAAGTTTAAT
AAAAGAATTTGAAAATCTATATTATCCCCAATTAAAAAATGGAATTTATGCTTTCAAAATGAATTTTAAAATTAACGTAA
AAAATAATTTAGAAGAAAGCGTAGGGCTAAGAATTATTAATGTTGATAATAAGGATGTGCGTTTAATTTATATGTCAGGA
TCAAAAACGGATTTTGCCTTTTTATCTATTAGGAATAAAGGGCATTTTATGCTAGGAAGACAAGCCAAGATTCCAATTAA
GGTAAGCTCATCCTATAAAGTTAAGGGCGCATCTGAGCTTAAAGATATTTTGGGTTTAAGTTTCAATACAGATTTCGTTT
TATTAAAATCCGAAGACAATAGGGTTGAATTTCAATCAAAAGAAAAATCAATATATCCATTTGTAGATTTATTAAAAATT
AATAAAAATGATTTTAAAACTTTACACAAAGACAAGAAATTAAAAATTCTAAAAGAAGTAATTTATAGAAAGGGAAATAT
TAAAGGAATTGATGCTTTTGTTTATTTTGAAATTGAAGATAAAGCTTTTAACGATTCTAGTACCAAAATTTATGTGGAAA
ATATTATTAGTACTAATCTGAATAACTCTATTTTTAGCTTAAAAGGATTTAATAGAATATTTGATTTATATTCAAGGTAT
ATAAATTAA

Upstream 100 bases:

>100_bases
GATATAATATATGTTTCAATTTTCATGTTAATTCTTGCTATTTTTTCTTCTATTTTGCCATTTAGCAAAGCAAGTAAGAA
ATCGGTAGTAGAGGTAATGA

Downstream 100 bases:

>100_bases
GAGCGTAGAGGGATAGTTAATATTGGTATTTTTTAAAAAATTTTGTTTAATTCTTTTTTTGGCTTTACCTGGTTTTTTGT
TTGCGGAATCCTCTTTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MMLKIFVIVFNFCVLNLLNAGDGKSLIKEFENLYYPQLKNGIYAFKMNFKINVKNNLEESVGLRIINVDNKDVRLIYMSG
SKTDFAFLSIRNKGHFMLGRQAKIPIKVSSSYKVKGASELKDILGLSFNTDFVLLKSEDNRVEFQSKEKSIYPFVDLLKI
NKNDFKTLHKDKKLKILKEVIYRKGNIKGIDAFVYFEIEDKAFNDSSTKIYVENIISTNLNNSIFSLKGFNRIFDLYSRY
IN

Sequences:

>Translated_242_residues
MMLKIFVIVFNFCVLNLLNAGDGKSLIKEFENLYYPQLKNGIYAFKMNFKINVKNNLEESVGLRIINVDNKDVRLIYMSG
SKTDFAFLSIRNKGHFMLGRQAKIPIKVSSSYKVKGASELKDILGLSFNTDFVLLKSEDNRVEFQSKEKSIYPFVDLLKI
NKNDFKTLHKDKKLKILKEVIYRKGNIKGIDAFVYFEIEDKAFNDSSTKIYVENIISTNLNNSIFSLKGFNRIFDLYSRY
IN
>Mature_242_residues
MMLKIFVIVFNFCVLNLLNAGDGKSLIKEFENLYYPQLKNGIYAFKMNFKINVKNNLEESVGLRIINVDNKDVRLIYMSG
SKTDFAFLSIRNKGHFMLGRQAKIPIKVSSSYKVKGASELKDILGLSFNTDFVLLKSEDNRVEFQSKEKSIYPFVDLLKI
NKNDFKTLHKDKKLKILKEVIYRKGNIKGIDAFVYFEIEDKAFNDSSTKIYVENIISTNLNNSIFSLKGFNRIFDLYSRY
IN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28075; Mature: 28075

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLKIFVIVFNFCVLNLLNAGDGKSLIKEFENLYYPQLKNGIYAFKMNFKINVKNNLEES
CEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHCCCEEEEEEEEEEEECCCCCHH
VGLRIINVDNKDVRLIYMSGSKTDFAFLSIRNKGHFMLGRQAKIPIKVSSSYKVKGASEL
HCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCEEECCCCCCEEEECCCEEECCHHHH
KDILGLSFNTDFVLLKSEDNRVEFQSKEKSIYPFVDLLKINKNDFKTLHKDKKLKILKEV
HHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEEECCHHHHHHHCCHHHHHHHHH
IYRKGNIKGIDAFVYFEIEDKAFNDSSTKIYVENIISTNLNNSIFSLKGFNRIFDLYSRY
HHHCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEHHCCCCCCEEEECCHHHHHHHHHHH
IN
CC
>Mature Secondary Structure
MMLKIFVIVFNFCVLNLLNAGDGKSLIKEFENLYYPQLKNGIYAFKMNFKINVKNNLEES
CEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHCCCEEEEEEEEEEEECCCCCHH
VGLRIINVDNKDVRLIYMSGSKTDFAFLSIRNKGHFMLGRQAKIPIKVSSSYKVKGASEL
HCEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCEEECCCCCCEEEECCCEEECCHHHH
KDILGLSFNTDFVLLKSEDNRVEFQSKEKSIYPFVDLLKINKNDFKTLHKDKKLKILKEV
HHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEEEECCHHHHHHHCCHHHHHHHHH
IYRKGNIKGIDAFVYFEIEDKAFNDSSTKIYVENIISTNLNNSIFSLKGFNRIFDLYSRY
HHHCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEHHCCCCCCEEEECCHHHHHHHHHHH
IN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA