Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496851
Identifier: 11496851
GI number: 11496851
Start: 21971
End: 23008
Strand: Direct
Name: 11496851
Synonym: BBJ29
Alternate gene names: NA
Gene position: 21971-23008 (Clockwise)
Preceding gene: 11496850
Following gene: 11496852
Centisome position: 56.58
GC content: 24.86
Gene sequence:
>1038_bases TTGGTATTTTTTAAAAAATTTTGTTTAATTCTTTTTTTGGCTTTACCTGGTTTTTTGTTTGCGGAATCCTCTTTGTTTTT AAAGGAGCATTTAGGATTCAAAACAAAATTCTCTTTATTGTTGCCCGATGAAGATAAAAAAGATTTTTTTGGTACAGGAG CTTTACAATTTGACAATGAAGCTTATTTAGGATTTTTATTAAACTATAAGATATTAGAATTTGGCATTGCACCTTCTTTT ATTGTGCAAAATAATGATCAATATTTTAGTTTTAATAAATTATTCTTCAATTTAAGCTTTAATGATTTTATTTTTAAATT AGGTAGGCAAAATTATTATTTAGGAAATGGATTAATTGAAAATATTGTTTTAAAAAGGACCACAATAGAACCAGAATGGT TTTTTGAGTTTTATTATTTTATTTCTAATTATTCTGTCTCTTTGGGTTCTATGTTAGACAAAGAAAGCTTAGATAAATTT TCATCTCCCAAATATTTATCCCCTTGGCTTTATTTTCAAGCATCTTTTAATGAAGTTGATTTACTTGCAATGGTTGAATT CCCATTTAGCATTGAAAATAAAACTTTTGATATTACTGTTATTTTTGATTTTTTATTTGAAATTTATAGTGGAATATTTT TTTACTCTACGTTAAGACAAGACCTACTTTGGTCTAAAAATTATAAATTTGATGATGATGACAATAGATTTTTGCTTGGT CTTAGATATTATATTAGCTTTGAAAATGACGTTTTTAATGATTTGTCAATAGTATTTGAGAGTTATTCGAAGAATAATAA TTATTTTTTGGGAGCTGGGATCAAACTAGCATGGATTTATGAGCTACTCCAAACGACGGTTTCTTTAAGAACCAATCTAA ATACTCATTCCTTGCAATTCTATTTTGAAAATAATTTTTTAATTCTTAAAGAATGTTCTTTAAAGGTGTCAAATATATTG GAATTTAATAAAAAGATAAATCTTAAGGATACTCCTTTTTACAATATGTTTAGTATTGAACTAAAAATTGAATTATAA
Upstream 100 bases:
>100_bases ACTAATCTGAATAACTCTATTTTTAGCTTAAAAGGATTTAATAGAATATTTGATTTATATTCAAGGTATATAAATTAAGA GCGTAGAGGGATAGTTAATA
Downstream 100 bases:
>100_bases GATTTCTAGTTGGTATATTATATTTTTTCATGTTATATTCAAGATGAGTGTATTATGAAGCTGGGCGCAGATAAAATTAT AAGGCAAAAAGATAGATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MVFFKKFCLILFLALPGFLFAESSLFLKEHLGFKTKFSLLLPDEDKKDFFGTGALQFDNEAYLGFLLNYKILEFGIAPSF IVQNNDQYFSFNKLFFNLSFNDFIFKLGRQNYYLGNGLIENIVLKRTTIEPEWFFEFYYFISNYSVSLGSMLDKESLDKF SSPKYLSPWLYFQASFNEVDLLAMVEFPFSIENKTFDITVIFDFLFEIYSGIFFYSTLRQDLLWSKNYKFDDDDNRFLLG LRYYISFENDVFNDLSIVFESYSKNNNYFLGAGIKLAWIYELLQTTVSLRTNLNTHSLQFYFENNFLILKECSLKVSNIL EFNKKINLKDTPFYNMFSIELKIEL
Sequences:
>Translated_345_residues MVFFKKFCLILFLALPGFLFAESSLFLKEHLGFKTKFSLLLPDEDKKDFFGTGALQFDNEAYLGFLLNYKILEFGIAPSF IVQNNDQYFSFNKLFFNLSFNDFIFKLGRQNYYLGNGLIENIVLKRTTIEPEWFFEFYYFISNYSVSLGSMLDKESLDKF SSPKYLSPWLYFQASFNEVDLLAMVEFPFSIENKTFDITVIFDFLFEIYSGIFFYSTLRQDLLWSKNYKFDDDDNRFLLG LRYYISFENDVFNDLSIVFESYSKNNNYFLGAGIKLAWIYELLQTTVSLRTNLNTHSLQFYFENNFLILKECSLKVSNIL EFNKKINLKDTPFYNMFSIELKIEL >Mature_345_residues MVFFKKFCLILFLALPGFLFAESSLFLKEHLGFKTKFSLLLPDEDKKDFFGTGALQFDNEAYLGFLLNYKILEFGIAPSF IVQNNDQYFSFNKLFFNLSFNDFIFKLGRQNYYLGNGLIENIVLKRTTIEPEWFFEFYYFISNYSVSLGSMLDKESLDKF SSPKYLSPWLYFQASFNEVDLLAMVEFPFSIENKTFDITVIFDFLFEIYSGIFFYSTLRQDLLWSKNYKFDDDDNRFLLG LRYYISFENDVFNDLSIVFESYSKNNNYFLGAGIKLAWIYELLQTTVSLRTNLNTHSLQFYFENNFLILKECSLKVSNIL EFNKKINLKDTPFYNMFSIELKIEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40963; Mature: 40963
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFFKKFCLILFLALPGFLFAESSLFLKEHLGFKTKFSLLLPDEDKKDFFGTGALQFDNE CCHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCEEEEEEECCCCCCCCEECCEEEECCC AYLGFLLNYKILEFGIAPSFIVQNNDQYFSFNKLFFNLSFNDFIFKLGRQNYYLGNGLIE EEEEEEEEEEEEEECCCCEEEEECCCCEEEEEEEEEEECHHHHHHHHCCCCEEECCCHHH NIVLKRTTIEPEWFFEFYYFISNYSVSLGSMLDKESLDKFSSPKYLSPWLYFQASFNEVD HHEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCHHHHHHCCCCCCCCCEEEEEECCCCEE LLAMVEFPFSIENKTFDITVIFDFLFEIYSGIFFYSTLRQDLLWSKNYKFDDDDNRFLLG EEEEEECCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE LRYYISFENDVFNDLSIVFESYSKNNNYFLGAGIKLAWIYELLQTTVSLRTNLNTHSLQF EEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEE YFENNFLILKECSLKVSNILEFNKKINLKDTPFYNMFSIELKIEL EEECCEEEEEECCCCHHHHHHHCCEECCCCCCCEEEEEEEEEEEC >Mature Secondary Structure MVFFKKFCLILFLALPGFLFAESSLFLKEHLGFKTKFSLLLPDEDKKDFFGTGALQFDNE CCHHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCCEEEEEEECCCCCCCCEECCEEEECCC AYLGFLLNYKILEFGIAPSFIVQNNDQYFSFNKLFFNLSFNDFIFKLGRQNYYLGNGLIE EEEEEEEEEEEEEECCCCEEEEECCCCEEEEEEEEEEECHHHHHHHHCCCCEEECCCHHH NIVLKRTTIEPEWFFEFYYFISNYSVSLGSMLDKESLDKFSSPKYLSPWLYFQASFNEVD HHEEEEECCCHHHHHHHHHHHHCCCCHHHHHHCHHHHHHCCCCCCCCCEEEEEECCCCEE LLAMVEFPFSIENKTFDITVIFDFLFEIYSGIFFYSTLRQDLLWSKNYKFDDDDNRFLLG EEEEEECCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE LRYYISFENDVFNDLSIVFESYSKNNNYFLGAGIKLAWIYELLQTTVSLRTNLNTHSLQF EEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEE YFENNFLILKECSLKVSNILEFNKKINLKDTPFYNMFSIELKIEL EEECCEEEEEECCCCHHHHHHHCCEECCCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA