Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114800038

Identifier: 114800038

GI number: 114800038

Start: 3393819

End: 3395690

Strand: Reverse

Name: 114800038

Synonym: HNE_3226

Alternate gene names: NA

Gene position: 3395690-3393819 (Counterclockwise)

Preceding gene: 114797308

Following gene: 114798370

Centisome position: 91.65

GC content: 59.67

Gene sequence:

>1872_bases
ATGTTGCGCAGCGCTGCGTCCGCTCTCGCCCTCGTTTTTGTTCTTGGGGCGTGCGCGCCCGAGACACCCCAGCCGGCTGC
CCCGGCCGAAATGACTGCTGAAGAGCAGGCCGCGATCAGCGAGCAGCTGAACGCGTGGTTTGATACCAAATATGAAGAAC
AGCTTCAGGAGAGCCCGGTTCAGCTCTCTTTCCTTGGCCGCAAGGACAAGAATGACCAGATCGACTGCATGACTATTGCT
TGCCAGGACGAGCAGCTGGCCAAGGCGAAAGCGGCTGTTGATGAGCTGAAGGCGACCTTCAATTACGATCAGCTTTCGGC
CGCCGACAAGGATTCCTACGATCTCTGGGTATTCCAGTATGAGCAGGCCGCAAAGGCGGTCGATTTCCGCGACAACGGCC
TGATCTTCGACCAGATGAGCGGCATGCACACTTTCGTGCCGACCTTCCTGATGCAGTTCCATTCGGTGGACGAAGAGGCC
GACGCCCGCGCCTATGTGAAGCGCATCACCGAAGGCGCCCGCGCGCTGCGCGAACTGCTGGCGCAGGCACGGGACAAGGC
CGGCAAGGGCGTTCATGCGCCGAAGTTTGCGTATGAAGCAGTTGCCGAAGAGTCGAAGAAGCTGATCACCGGCGCGCCGT
TCACGGACGGCCCCGACAGCGCCGTTCTGGCAGACTTCAAGACCGATGTTCAGGCCCTCGTCGATGCGGGCAAGACCACG
CCGGAAACGGCCGCTGAGCTCATCGCCGAAGCCGAAGCCGCGCTGACGGGCGATTTTCAGGCCGTGTATAACGAGATCAT
CGCCTTCACTGAGGAAGATCTGGTCAACTCTCCGGACCCGGCCGGGCCGCAGGGGATCAGCACTCAGCCAAACGGTTCAG
CCTTCTATGACTTCATGCTGTCGCAGATGACCACGACCAGCATGACGGCTGACGAGATCCACAATCTGGGCCTTTCGGAG
GTCGATCGCATTCATGAAGAGATGGAAGCGATCAAGACGCAGGTTGGCTTTACCGGTACGCTGAACGAATTCTTCGCCAG
CATCCGCGACGACAAGGATAATCCAAAGCATTATTATCCTGACACGGATGAAGGCCGTCAGGCCTATATCGATGACGCCA
CAGCTGCCATCGAGAAGATCAAGGCGGTTCTGCCGGACTATTTCGGCATTCTGCCGAAAGCTGATCTGGTCGTGAAGCGG
GTTGAGCCCTTCCGCGAGCAGGCAGGCGCCGCCCAGCATTACTATCCGGGCACACCCGATGGCTCGCGCCCCGGCGTCTA
TTATGCCCACCTTCTCGACATGAAGGCGATGCCCAAGGGTGAGCTGGAAGTGATCGCGTATCACGAAGGTCTGCCGGGCC
ACCACATGCAGATCTCGATCGCGCAGGAGCTGACCGGCGTTCCGCAATTCCGCACGCAGGCCGGTTTCACCGCCTATTCG
GAAGGTTGGGGCCTCTATTCGGAAAAGCTCGCCAAGGAAATGCCTGGCACCTATACTGATCCGTATTCGGACTTCGGCCG
GCTCGGCTCGGAAATCTGGCGCGCGATCCGTCTGGTGGTCGATACCGGTTTGCATTCCAAAGGCTGGACCGAAGAACAGG
CGGTGCAATACTTCCTCGACAATTCAGCGATCACCGAAGGCCAGGCACGTTCTGAAGTGCGCCGCTATATCGTGATACCG
GGGCAGGCCACCGCCTACAAGATCGGCATGATCGAAATCCAGCAGATGCGGGCCAAAGCCGAAGCCGAGCTGGGCGAGAA
GTTCGACATCCGCGCCTTCCATGACACGGTTCTGGGCGGCGGCGCACTGCCGCTGGCCATGCTGGAAGCCAAGATTGACC
GCTGGATTGAAGAGGTCAAAGCGGCCGGCTGA

Upstream 100 bases:

>100_bases
TTCTCCCTAACCGCGGAAGCGGCGCTTGCCAATTGACGCCGGGAGCGCAGGGGGGTACCCATCCTTATCGTTTTACGGCA
AATACCTTGGAGGATTCGCC

Downstream 100 bases:

>100_bases
TCTGCCCAAGCTGCTGGACTGAACGCGAGGGCAGGGCTTGCCAGATGGCGCCCTGCCCTCATTCTTTTCTGGGAACAGGC
AGAGCACGCCTGAATGCTTG

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 623; Mature: 623

Protein sequence:

>623_residues
MLRSAASALALVFVLGACAPETPQPAAPAEMTAEEQAAISEQLNAWFDTKYEEQLQESPVQLSFLGRKDKNDQIDCMTIA
CQDEQLAKAKAAVDELKATFNYDQLSAADKDSYDLWVFQYEQAAKAVDFRDNGLIFDQMSGMHTFVPTFLMQFHSVDEEA
DARAYVKRITEGARALRELLAQARDKAGKGVHAPKFAYEAVAEESKKLITGAPFTDGPDSAVLADFKTDVQALVDAGKTT
PETAAELIAEAEAALTGDFQAVYNEIIAFTEEDLVNSPDPAGPQGISTQPNGSAFYDFMLSQMTTTSMTADEIHNLGLSE
VDRIHEEMEAIKTQVGFTGTLNEFFASIRDDKDNPKHYYPDTDEGRQAYIDDATAAIEKIKAVLPDYFGILPKADLVVKR
VEPFREQAGAAQHYYPGTPDGSRPGVYYAHLLDMKAMPKGELEVIAYHEGLPGHHMQISIAQELTGVPQFRTQAGFTAYS
EGWGLYSEKLAKEMPGTYTDPYSDFGRLGSEIWRAIRLVVDTGLHSKGWTEEQAVQYFLDNSAITEGQARSEVRRYIVIP
GQATAYKIGMIEIQQMRAKAEAELGEKFDIRAFHDTVLGGGALPLAMLEAKIDRWIEEVKAAG

Sequences:

>Translated_623_residues
MLRSAASALALVFVLGACAPETPQPAAPAEMTAEEQAAISEQLNAWFDTKYEEQLQESPVQLSFLGRKDKNDQIDCMTIA
CQDEQLAKAKAAVDELKATFNYDQLSAADKDSYDLWVFQYEQAAKAVDFRDNGLIFDQMSGMHTFVPTFLMQFHSVDEEA
DARAYVKRITEGARALRELLAQARDKAGKGVHAPKFAYEAVAEESKKLITGAPFTDGPDSAVLADFKTDVQALVDAGKTT
PETAAELIAEAEAALTGDFQAVYNEIIAFTEEDLVNSPDPAGPQGISTQPNGSAFYDFMLSQMTTTSMTADEIHNLGLSE
VDRIHEEMEAIKTQVGFTGTLNEFFASIRDDKDNPKHYYPDTDEGRQAYIDDATAAIEKIKAVLPDYFGILPKADLVVKR
VEPFREQAGAAQHYYPGTPDGSRPGVYYAHLLDMKAMPKGELEVIAYHEGLPGHHMQISIAQELTGVPQFRTQAGFTAYS
EGWGLYSEKLAKEMPGTYTDPYSDFGRLGSEIWRAIRLVVDTGLHSKGWTEEQAVQYFLDNSAITEGQARSEVRRYIVIP
GQATAYKIGMIEIQQMRAKAEAELGEKFDIRAFHDTVLGGGALPLAMLEAKIDRWIEEVKAAG
>Mature_623_residues
MLRSAASALALVFVLGACAPETPQPAAPAEMTAEEQAAISEQLNAWFDTKYEEQLQESPVQLSFLGRKDKNDQIDCMTIA
CQDEQLAKAKAAVDELKATFNYDQLSAADKDSYDLWVFQYEQAAKAVDFRDNGLIFDQMSGMHTFVPTFLMQFHSVDEEA
DARAYVKRITEGARALRELLAQARDKAGKGVHAPKFAYEAVAEESKKLITGAPFTDGPDSAVLADFKTDVQALVDAGKTT
PETAAELIAEAEAALTGDFQAVYNEIIAFTEEDLVNSPDPAGPQGISTQPNGSAFYDFMLSQMTTTSMTADEIHNLGLSE
VDRIHEEMEAIKTQVGFTGTLNEFFASIRDDKDNPKHYYPDTDEGRQAYIDDATAAIEKIKAVLPDYFGILPKADLVVKR
VEPFREQAGAAQHYYPGTPDGSRPGVYYAHLLDMKAMPKGELEVIAYHEGLPGHHMQISIAQELTGVPQFRTQAGFTAYS
EGWGLYSEKLAKEMPGTYTDPYSDFGRLGSEIWRAIRLVVDTGLHSKGWTEEQAVQYFLDNSAITEGQARSEVRRYIVIP
GQATAYKIGMIEIQQMRAKAEAELGEKFDIRAFHDTVLGGGALPLAMLEAKIDRWIEEVKAAG

Specific function: Unknown

COG id: COG4805

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68639; Mature: 68639

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSAASALALVFVLGACAPETPQPAAPAEMTAEEQAAISEQLNAWFDTKYEEQLQESPV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCC
QLSFLGRKDKNDQIDCMTIACQDEQLAKAKAAVDELKATFNYDQLSAADKDSYDLWVFQY
EEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEH
EQAAKAVDFRDNGLIFDQMSGMHTFVPTFLMQFHSVDEEADARAYVKRITEGARALRELL
HHHHHHCCCCCCCEEEHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AQARDKAGKGVHAPKFAYEAVAEESKKLITGAPFTDGPDSAVLADFKTDVQALVDAGKTT
HHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCC
PETAAELIAEAEAALTGDFQAVYNEIIAFTEEDLVNSPDPAGPQGISTQPNGSAFYDFML
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
SQMTTTSMTADEIHNLGLSEVDRIHEEMEAIKTQVGFTGTLNEFFASIRDDKDNPKHYYP
HHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC
DTDEGRQAYIDDATAAIEKIKAVLPDYFGILPKADLVVKRVEPFREQAGAAQHYYPGTPD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
GSRPGVYYAHLLDMKAMPKGELEVIAYHEGLPGHHMQISIAQELTGVPQFRTQAGFTAYS
CCCCCEEEHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCCCHHHHCCCCCHH
EGWGLYSEKLAKEMPGTYTDPYSDFGRLGSEIWRAIRLVVDTGLHSKGWTEEQAVQYFLD
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
NSAITEGQARSEVRRYIVIPGQATAYKIGMIEIQQMRAKAEAELGEKFDIRAFHDTVLGG
CCCCCCCHHHHHCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
GALPLAMLEAKIDRWIEEVKAAG
CCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRSAASALALVFVLGACAPETPQPAAPAEMTAEEQAAISEQLNAWFDTKYEEQLQESPV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCC
QLSFLGRKDKNDQIDCMTIACQDEQLAKAKAAVDELKATFNYDQLSAADKDSYDLWVFQY
EEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEEH
EQAAKAVDFRDNGLIFDQMSGMHTFVPTFLMQFHSVDEEADARAYVKRITEGARALRELL
HHHHHHCCCCCCCEEEHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AQARDKAGKGVHAPKFAYEAVAEESKKLITGAPFTDGPDSAVLADFKTDVQALVDAGKTT
HHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCEEHHHHHHHHHHHHCCCCC
PETAAELIAEAEAALTGDFQAVYNEIIAFTEEDLVNSPDPAGPQGISTQPNGSAFYDFML
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
SQMTTTSMTADEIHNLGLSEVDRIHEEMEAIKTQVGFTGTLNEFFASIRDDKDNPKHYYP
HHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCC
DTDEGRQAYIDDATAAIEKIKAVLPDYFGILPKADLVVKRVEPFREQAGAAQHYYPGTPD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
GSRPGVYYAHLLDMKAMPKGELEVIAYHEGLPGHHMQISIAQELTGVPQFRTQAGFTAYS
CCCCCEEEHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCCCHHHHCCCCCHH
EGWGLYSEKLAKEMPGTYTDPYSDFGRLGSEIWRAIRLVVDTGLHSKGWTEEQAVQYFLD
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
NSAITEGQARSEVRRYIVIPGQATAYKIGMIEIQQMRAKAEAELGEKFDIRAFHDTVLGG
CCCCCCCHHHHHCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
GALPLAMLEAKIDRWIEEVKAAG
CCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA