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The map label for this gene is mmgC [H]

Identifier: 114798370

GI number: 114798370

Start: 3392543

End: 3393706

Strand: Reverse

Name: mmgC [H]

Synonym: HNE_3225

Alternate gene names: 114798370

Gene position: 3393706-3392543 (Counterclockwise)

Preceding gene: 114800038

Following gene: 114797078

Centisome position: 91.6

GC content: 62.29

Gene sequence:

>1164_bases
TTGGACCTGAAGTTCAGCGCGCATGTCGAGGATTTCCGCCGGGAGGTCCGCCATTGGTTTGAAACGCAGTTTCCCAAGGA
CATCATCGAGAAATACAAGGCTGGCCAGCCTCTGGCCACGGCGGACGTGCGCCGTTCCGAAATGGCGCTGGGCGCCAAAG
GCTGGCTAGCGTCGGCCTGGCCAAAGGAGCATGGCGGTCCCGGCTGGAGCATCGAGGAGCAGTATGTTTTCGATGAGGAG
CTGGAGCGCGCCGGCGTACCGACCGTTACGCCGATGGGCGTCGTCTATGTCGGCCCGGTGATCTACACATTCGGCTCAGA
GGCGCAAAAACAGCGCTGGCTGCCAGGCATCCGCGATGGCTCCAATGGCTGGGCGCAAGGGTATTCGGAACCCGGCGCAG
GCTCTGACCTCGCCAGCCTGGAGTTTTCAGCCGAGCTGAAAGACGGAACCTATACCCTCAACGGCCACAAGATCTGGACG
TCCGCCGCCCAGCATGCCGACTGGATTTTCCTGCTGGCGCGCACCAGCCGCCGCGAGAAGAAACAGGAAGGCATCTCCTT
CATCTGCTGCCCGATGGGCGCACCCGGCCTGACCGTGAAGCCGATCGTGACGATTGATGGCGCGCATGTGCTCAATGAAG
TCCTGTTCGACAATGTGAAGGTGCCTGAGGACAACCGCATCGGCGAGGAAGGGAAGGGCTGGACCTATTCCCAGTATCTC
CTCGGCTTTGAGCGCACCTCTTACGCGCGTATCGGCGGCAAGCGCGCGATGCTGCGCTATGTGCGCGCGCTGGCCACGGC
AGGGTCGCCCGGAACCAACGAGCGGCTGATCGATGATCCGGGATTTGCCATGCGCCTTGCCGAGGCCGAGATTGCTGTGG
ACGGGCTTGAGATGACGGTTTTCCGCATTCTTTCTGCCGTTGCTGCGGGCGGCACGCCAGGGGATGCGGCCTCCACGGTG
AAAATCCTTGCCACCGAAACCCACCAGCAGATCACCGAGCTGTTTCTGGACGCTGCGGGGCCGCATGTAGGCCATCGCGG
GCCATCTTCCGGCACCACGCCGCGTGATGTAGCGACGTATTTTGCCGGGCGCGCCCAGTCGATCTATGGCGGGACGAATG
AAATCCAGAAAACCATCATTGCCCGCAAGGTGCTGGGGCTCTGA

Upstream 100 bases:

>100_bases
GCTGGACTGAACGCGAGGGCAGGGCTTGCCAGATGGCGCCCTGCCCTCATTCTTTTCTGGGAACAGGCAGAGCACGCCTG
AATGCTTGGGGAGGATCGTT

Downstream 100 bases:

>100_bases
TCTGCATACGCAGTCAAGTTCAGGCGGGGCGATAGCTGCGGAACGTAATGGCGGCGGCCGCAAAGCTGATCGCGGCGAGG
ATGGCTGAAATCACGCCGTT

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MDLKFSAHVEDFRREVRHWFETQFPKDIIEKYKAGQPLATADVRRSEMALGAKGWLASAWPKEHGGPGWSIEEQYVFDEE
LERAGVPTVTPMGVVYVGPVIYTFGSEAQKQRWLPGIRDGSNGWAQGYSEPGAGSDLASLEFSAELKDGTYTLNGHKIWT
SAAQHADWIFLLARTSRREKKQEGISFICCPMGAPGLTVKPIVTIDGAHVLNEVLFDNVKVPEDNRIGEEGKGWTYSQYL
LGFERTSYARIGGKRAMLRYVRALATAGSPGTNERLIDDPGFAMRLAEAEIAVDGLEMTVFRILSAVAAGGTPGDAASTV
KILATETHQQITELFLDAAGPHVGHRGPSSGTTPRDVATYFAGRAQSIYGGTNEIQKTIIARKVLGL

Sequences:

>Translated_387_residues
MDLKFSAHVEDFRREVRHWFETQFPKDIIEKYKAGQPLATADVRRSEMALGAKGWLASAWPKEHGGPGWSIEEQYVFDEE
LERAGVPTVTPMGVVYVGPVIYTFGSEAQKQRWLPGIRDGSNGWAQGYSEPGAGSDLASLEFSAELKDGTYTLNGHKIWT
SAAQHADWIFLLARTSRREKKQEGISFICCPMGAPGLTVKPIVTIDGAHVLNEVLFDNVKVPEDNRIGEEGKGWTYSQYL
LGFERTSYARIGGKRAMLRYVRALATAGSPGTNERLIDDPGFAMRLAEAEIAVDGLEMTVFRILSAVAAGGTPGDAASTV
KILATETHQQITELFLDAAGPHVGHRGPSSGTTPRDVATYFAGRAQSIYGGTNEIQKTIIARKVLGL
>Mature_387_residues
MDLKFSAHVEDFRREVRHWFETQFPKDIIEKYKAGQPLATADVRRSEMALGAKGWLASAWPKEHGGPGWSIEEQYVFDEE
LERAGVPTVTPMGVVYVGPVIYTFGSEAQKQRWLPGIRDGSNGWAQGYSEPGAGSDLASLEFSAELKDGTYTLNGHKIWT
SAAQHADWIFLLARTSRREKKQEGISFICCPMGAPGLTVKPIVTIDGAHVLNEVLFDNVKVPEDNRIGEEGKGWTYSQYL
LGFERTSYARIGGKRAMLRYVRALATAGSPGTNERLIDDPGFAMRLAEAEIAVDGLEMTVFRILSAVAAGGTPGDAASTV
KILATETHQQITELFLDAAGPHVGHRGPSSGTTPRDVATYFAGRAQSIYGGTNEIQKTIIARKVLGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=348, Percent_Identity=27.8735632183908, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI226958412, Length=347, Percent_Identity=25.0720461095101, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI226958414, Length=347, Percent_Identity=25.0720461095101, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI4501859, Length=383, Percent_Identity=27.154046997389, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI187960098, Length=341, Percent_Identity=25.8064516129032, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4557231, Length=341, Percent_Identity=25.8064516129032, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4501857, Length=394, Percent_Identity=26.6497461928934, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI76496475, Length=296, Percent_Identity=27.3648648648649, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI4557235, Length=296, Percent_Identity=27.3648648648649, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI7656849, Length=364, Percent_Identity=27.4725274725275, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI211971008, Length=301, Percent_Identity=24.5847176079734, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI48976061, Length=301, Percent_Identity=24.5847176079734, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI38505218, Length=256, Percent_Identity=25.78125, Blast_Score=73, Evalue=6e-13,
Organism=Escherichia coli, GI87081958, Length=402, Percent_Identity=24.3781094527363, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1786223, Length=356, Percent_Identity=24.7191011235955, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17570075, Length=410, Percent_Identity=25.3658536585366, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17538396, Length=348, Percent_Identity=25.2873563218391, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17508101, Length=343, Percent_Identity=26.2390670553936, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17551932, Length=209, Percent_Identity=27.2727272727273, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=209, Percent_Identity=28.2296650717703, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17506239, Length=299, Percent_Identity=27.7591973244147, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17569725, Length=363, Percent_Identity=24.5179063360882, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=260, Percent_Identity=25.7692307692308, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17534899, Length=351, Percent_Identity=24.5014245014245, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71985184, Length=149, Percent_Identity=34.8993288590604, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=146, Percent_Identity=34.9315068493151, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=265, Percent_Identity=28.6792452830189, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17534353, Length=186, Percent_Identity=31.1827956989247, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24666513, Length=347, Percent_Identity=28.5302593659942, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24646207, Length=360, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21356377, Length=348, Percent_Identity=26.7241379310345, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21355753, Length=391, Percent_Identity=25.5754475703325, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24660351, Length=345, Percent_Identity=24.9275362318841, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI19920834, Length=233, Percent_Identity=30.0429184549356, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42262; Mature: 42262

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKFSAHVEDFRREVRHWFETQFPKDIIEKYKAGQPLATADVRRSEMALGAKGWLASAW
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC
PKEHGGPGWSIEEQYVFDEELERAGVPTVTPMGVVYVGPVIYTFGSEAQKQRWLPGIRDG
CHHCCCCCCCCCCCHHCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCC
SNGWAQGYSEPGAGSDLASLEFSAELKDGTYTLNGHKIWTSAAQHADWIFLLARTSRREK
CCHHHCCCCCCCCCCCCHHEEEEEEECCCEEEECCCEEEHHHHCCCCEEEEEEHHHHHHH
KQEGISFICCPMGAPGLTVKPIVTIDGAHVLNEVLFDNVKVPEDNRIGEEGKGWTYSQYL
HHCCCEEEEECCCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
LGFERTSYARIGGKRAMLRYVRALATAGSPGTNERLIDDPGFAMRLAEAEIAVDGLEMTV
HHHCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEHHHHHHCHHHHHH
FRILSAVAAGGTPGDAASTVKILATETHQQITELFLDAAGPHVGHRGPSSGTTPRDVATY
HHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
FAGRAQSIYGGTNEIQKTIIARKVLGL
HHCCCHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLKFSAHVEDFRREVRHWFETQFPKDIIEKYKAGQPLATADVRRSEMALGAKGWLASAW
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC
PKEHGGPGWSIEEQYVFDEELERAGVPTVTPMGVVYVGPVIYTFGSEAQKQRWLPGIRDG
CHHCCCCCCCCCCCHHCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCC
SNGWAQGYSEPGAGSDLASLEFSAELKDGTYTLNGHKIWTSAAQHADWIFLLARTSRREK
CCHHHCCCCCCCCCCCCHHEEEEEEECCCEEEECCCEEEHHHHCCCCEEEEEEHHHHHHH
KQEGISFICCPMGAPGLTVKPIVTIDGAHVLNEVLFDNVKVPEDNRIGEEGKGWTYSQYL
HHCCCEEEEECCCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
LGFERTSYARIGGKRAMLRYVRALATAGSPGTNERLIDDPGFAMRLAEAEIAVDGLEMTV
HHHCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEHHHHHHCHHHHHH
FRILSAVAAGGTPGDAASTVKILATETHQQITELFLDAAGPHVGHRGPSSGTTPRDVATY
HHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
FAGRAQSIYGGTNEIQKTIIARKVLGL
HHCCCHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]