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The map label for this gene is yagQ [H]

Identifier: 114800035

GI number: 114800035

Start: 1075853

End: 1077394

Strand: Reverse

Name: yagQ [H]

Synonym: HNE_1070

Alternate gene names: 114800035

Gene position: 1077394-1075853 (Counterclockwise)

Preceding gene: 114797284

Following gene: 114800233

Centisome position: 29.08

GC content: 67.25

Gene sequence:

>1542_bases
GTGACCGGCCAGAAAGGATCACGGGTGCAAACGCTATCTTCCCCAGCAGGTGCCGGGCGGTATCTGGAACATCCCGAGGA
TGTTCTGGCCAAATGGCTCGACTGGCGCGCGAGCGGGCCCGTTGCCCTGGTCGTCGTCGTCGAAACAACCGGCGGCGCAG
TCCGCCGGCCCGGCGCCCTCATGGCCGTTGCCCAAGACGGGCGGACAGCCGGCTACATCTCCGGCGGATGTATTGATGCA
GACGCCATCCTTCAGGCCCAGCGCAGCCTCGCAGGCAGGCAGCCGGTAACCCTGCTCTATGGCGCGGGCTCCCCGTTTAT
CGACCTGCCGCTCCCCTGTGGCGGGTCCATCCTCATCAACATCCTTCCGGATGCGGACGAATCCGAGGTGAAAGCCTGCC
ACGCGCAACTGGCATCCCGCGCCCCCGCGACGCTCTTTCTGGCGGCCATCGGAAAAAGCTTCTCCTATGTTCCCAAACTG
CGCCTGCGCATCGCCGGGCGGGGCGCTGACCCGCTGGCACTGGCCCGCCTTGCCCGGTCAAGCGGGATCGAAACCACCCT
CTATCTTCCCGGCGGCCCCGATGTCCGCCTCGCAGAAGAAGAGGGGCACACCGACCTCGTTGTCCTGGGCTCCGCCAGCG
ACCTGCCACCCGTCCGGGGCGACGCCTGGTCCGCCTTCGTCATCATGTTCCATGATGGCGACCGGGAAGACGCCCTCCTC
GCCGATGCCCTCGCCGGAGACGCCTTCTTCATCGGCGCCGTTGGCAGCCGCCACACCCACGCCCTGCGCTGCGAGCGCTT
GCGCAAACGGGGCGTCCCCGAGGCAGACATCGCCAGAATTCACGGCCCCGTCGGCCTCATCCCGTCCATGCGCGACGCCT
CCATGCTGGCCGTCTCCGTGCTCAGCCAGATCGTCGCCGAATACCACAAACGCCACGCCTCCCCCTTTGCGCGCACAGCC
CTCGTCCTCCTCGCTGCCGGAAGCTCCAGCCGCTTTGCCGCGGGCGACAAGCTCCTCAGCGACTTTGACGGGCGCCCTCT
CCTCGATCACGCCGCCGCCTTCCTGCGGGGCGAACCCGTCGCGGCCCGGCTCGCCGTCGTGCCAGACCCGCCAGGCGAGC
GCGCCACCCGCCTTCAGTCCGCCGGCTGGTCGGTCCTCCCAAACCCCGAAGCGGCAACCGGCCTTGCCAGTTCCGTCAGA
TGCGGGGTTCAGGCGGCAAGCGACACGCCCTATGTTGAGCATGTCATGATCCTGCTCGCCGACATGCCCGCAATTCCCGC
GCAGCACCTGCTCAAACTGCAGCAGGCGATCAATGCCGGCCACCCTGCCGCCATGACCGAGTCCGGCGGCCGGCTCAGCC
CCCCGGCCATCTTCAACCGGGCCGCCTTTACAAGGCTGCTCGCGGTTGGCGGCGATTCAGGCGCACGAGACATCTTTCAT
TCTCTGCCGGGCGGCGTCACAGTCTCTCTGGATACGGCCCACGCCTTTGACATAGACACGACGGATGATCTTCGGCTTGC
ACAGGAATTAGCCAATGGCTGA

Upstream 100 bases:

>100_bases
GCGCCGCGGTCGCCAACGCCGTTTATAATGCAACCGGCGTCCGGGTGCGTGACTATCCGGTAACTCTCAGTAAGCTGCTC
TCCGGGCTTCCGGCGCTGGC

Downstream 100 bases:

>100_bases
CGGACTGGGACGCGCCCCGCCCCCACCCCTCACAGACGCTTTCGGGCGCAACGTCACCTATCTGCGCCTCTCGGTGACAG
ACCGCTGCGATCTGCGGTGC

Product: putative xanthine dehydrogenase accessory factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MTGQKGSRVQTLSSPAGAGRYLEHPEDVLAKWLDWRASGPVALVVVVETTGGAVRRPGALMAVAQDGRTAGYISGGCIDA
DAILQAQRSLAGRQPVTLLYGAGSPFIDLPLPCGGSILINILPDADESEVKACHAQLASRAPATLFLAAIGKSFSYVPKL
RLRIAGRGADPLALARLARSSGIETTLYLPGGPDVRLAEEEGHTDLVVLGSASDLPPVRGDAWSAFVIMFHDGDREDALL
ADALAGDAFFIGAVGSRHTHALRCERLRKRGVPEADIARIHGPVGLIPSMRDASMLAVSVLSQIVAEYHKRHASPFARTA
LVLLAAGSSSRFAAGDKLLSDFDGRPLLDHAAAFLRGEPVAARLAVVPDPPGERATRLQSAGWSVLPNPEAATGLASSVR
CGVQAASDTPYVEHVMILLADMPAIPAQHLLKLQQAINAGHPAAMTESGGRLSPPAIFNRAAFTRLLAVGGDSGARDIFH
SLPGGVTVSLDTAHAFDIDTTDDLRLAQELANG

Sequences:

>Translated_513_residues
MTGQKGSRVQTLSSPAGAGRYLEHPEDVLAKWLDWRASGPVALVVVVETTGGAVRRPGALMAVAQDGRTAGYISGGCIDA
DAILQAQRSLAGRQPVTLLYGAGSPFIDLPLPCGGSILINILPDADESEVKACHAQLASRAPATLFLAAIGKSFSYVPKL
RLRIAGRGADPLALARLARSSGIETTLYLPGGPDVRLAEEEGHTDLVVLGSASDLPPVRGDAWSAFVIMFHDGDREDALL
ADALAGDAFFIGAVGSRHTHALRCERLRKRGVPEADIARIHGPVGLIPSMRDASMLAVSVLSQIVAEYHKRHASPFARTA
LVLLAAGSSSRFAAGDKLLSDFDGRPLLDHAAAFLRGEPVAARLAVVPDPPGERATRLQSAGWSVLPNPEAATGLASSVR
CGVQAASDTPYVEHVMILLADMPAIPAQHLLKLQQAINAGHPAAMTESGGRLSPPAIFNRAAFTRLLAVGGDSGARDIFH
SLPGGVTVSLDTAHAFDIDTTDDLRLAQELANG
>Mature_512_residues
TGQKGSRVQTLSSPAGAGRYLEHPEDVLAKWLDWRASGPVALVVVVETTGGAVRRPGALMAVAQDGRTAGYISGGCIDAD
AILQAQRSLAGRQPVTLLYGAGSPFIDLPLPCGGSILINILPDADESEVKACHAQLASRAPATLFLAAIGKSFSYVPKLR
LRIAGRGADPLALARLARSSGIETTLYLPGGPDVRLAEEEGHTDLVVLGSASDLPPVRGDAWSAFVIMFHDGDREDALLA
DALAGDAFFIGAVGSRHTHALRCERLRKRGVPEADIARIHGPVGLIPSMRDASMLAVSVLSQIVAEYHKRHASPFARTAL
VLLAAGSSSRFAAGDKLLSDFDGRPLLDHAAAFLRGEPVAARLAVVPDPPGERATRLQSAGWSVLPNPEAATGLASSVRC
GVQAASDTPYVEHVMILLADMPAIPAQHLLKLQQAINAGHPAAMTESGGRLSPPAIFNRAAFTRLLAVGGDSGARDIFHS
LPGGVTVSLDTAHAFDIDTTDDLRLAQELANG

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786477, Length=282, Percent_Identity=30.4964539007092, Blast_Score=116, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 53603; Mature: 53472

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQKGSRVQTLSSPAGAGRYLEHPEDVLAKWLDWRASGPVALVVVVETTGGAVRRPGAL
CCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEE
MAVAQDGRTAGYISGGCIDADAILQAQRSLAGRQPVTLLYGAGSPFIDLPLPCGGSILIN
EEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCEEEEE
ILPDADESEVKACHAQLASRAPATLFLAAIGKSFSYVPKLRLRIAGRGADPLALARLARS
EECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHH
SGIETTLYLPGGPDVRLAEEEGHTDLVVLGSASDLPPVRGDAWSAFVIMFHDGDREDALL
CCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCHHH
ADALAGDAFFIGAVGSRHTHALRCERLRKRGVPEADIARIHGPVGLIPSMRDASMLAVSV
HHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH
LSQIVAEYHKRHASPFARTALVLLAAGSSSRFAAGDKLLSDFDGRPLLDHAAAFLRGEPV
HHHHHHHHHHHCCCHHHHEEEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCC
AARLAVVPDPPGERATRLQSAGWSVLPNPEAATGLASSVRCGVQAASDTPYVEHVMILLA
EEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
DMPAIPAQHLLKLQQAINAGHPAAMTESGGRLSPPAIFNRAAFTRLLAVGGDSGARDIFH
CCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHEECCCCCHHHHHH
SLPGGVTVSLDTAHAFDIDTTDDLRLAQELANG
HCCCCEEEEEECCEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TGQKGSRVQTLSSPAGAGRYLEHPEDVLAKWLDWRASGPVALVVVVETTGGAVRRPGAL
CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCEE
MAVAQDGRTAGYISGGCIDADAILQAQRSLAGRQPVTLLYGAGSPFIDLPLPCGGSILIN
EEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCEEEEE
ILPDADESEVKACHAQLASRAPATLFLAAIGKSFSYVPKLRLRIAGRGADPLALARLARS
EECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHH
SGIETTLYLPGGPDVRLAEEEGHTDLVVLGSASDLPPVRGDAWSAFVIMFHDGDREDALL
CCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCHHH
ADALAGDAFFIGAVGSRHTHALRCERLRKRGVPEADIARIHGPVGLIPSMRDASMLAVSV
HHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHH
LSQIVAEYHKRHASPFARTALVLLAAGSSSRFAAGDKLLSDFDGRPLLDHAAAFLRGEPV
HHHHHHHHHHHCCCHHHHEEEEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCC
AARLAVVPDPPGERATRLQSAGWSVLPNPEAATGLASSVRCGVQAASDTPYVEHVMILLA
EEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
DMPAIPAQHLLKLQQAINAGHPAAMTESGGRLSPPAIFNRAAFTRLLAVGGDSGARDIFH
CCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHEECCCCCHHHHHH
SLPGGVTVSLDTAHAFDIDTTDDLRLAQELANG
HCCCCEEEEEECCEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]