| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is caiD [C]
Identifier: 114799557
GI number: 114799557
Start: 996564
End: 997409
Strand: Reverse
Name: caiD [C]
Synonym: HNE_0981
Alternate gene names: 114799557
Gene position: 997409-996564 (Counterclockwise)
Preceding gene: 114798560
Following gene: 114798323
Centisome position: 26.92
GC content: 61.47
Gene sequence:
>846_bases ATGCTGAAAGACACATACGAAGCCTTCAAGGTGACCATCGAAGACAAGGTCGCCCACATCCAGATGTCGCGCCCCGAGGC GATGAACACGATGAACAAGGCGTTCTGGAACGAACTGCCCGAAATCGTCCGCACCATCGACAATAACGCGCTGGCCCGCG TCATCGTCATTTCCTCCACCGGCAAGCATTTCTCTGCTGGGATGGATACGTCCGTCTTCACCACGCCCCGCCCCGCCGCC GATCATGACCGCTTCGTGATGGCCGAGGCCTTCCGACTGAACGTGAAGGCCATCCAGTCCTCCTTCAACTGCATGGAAGA AGCCCGCGTGCCGGTCCTCTTCGCCTGCCACGGCGCAGTCATCGGCGGCGCCATCGACATGATCACCGCCGGCGACATCC GCTGGTGCACCAAAGACGCCTATTTCTGCATCATGGAAATCAACATCGCGATGACCGCCGATGTCGGCACCTTCCCGCGC CTCCAGCGCTACATCCCCGAAGGCTGGGTGAAAGAACTCGCCTATACCGGCCGCAAGATCGATGCTGCCAAGGCCAAGGA AATCGGCCTGGTGAACGACATCTACGACACCCATGAAGAGCTCATCGCCGGCGTCATGGCCACGGCCCGCGAGATCGCCT CGAAAAACCCCCTCGCCGTCACCGGCTCCAAGGTCCTCATCAATTACGGCCGCGACCACACCACCGCCGAAACGCTCGAC TATATCGGCCTCTGGAACACCGCCATGTTCCCCCCGCCGCACATGGCCGAAGCCTTTGCCGCCCGCGCCGAAAAACGCGA GCCGGTCTTCCCCGACCTCGCCCCCGTCCGTACAGAGCCTATGTAA
Upstream 100 bases:
>100_bases CGCCCGGTAAAAGCCGAAGCGGTAAAGCCTTAGCGCCGCGTCACCCCTCGCCGCGCCGCGTCTGCCTGCTACACTCCTCC CCAACCGGAGGAGACACCCC
Downstream 100 bases:
>100_bases CAAAAAAAGCCCCCTCCTCGGAGGGGGCTTTTTCTTTTCTGGCGAAAGGATCAGCCCTTCACCACCTCAAAATCCGTCCA GTCCGGCGTGCGCGTCTCTT
Product: enoyl-CoA hydratase/isomerase family protein
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MLKDTYEAFKVTIEDKVAHIQMSRPEAMNTMNKAFWNELPEIVRTIDNNALARVIVISSTGKHFSAGMDTSVFTTPRPAA DHDRFVMAEAFRLNVKAIQSSFNCMEEARVPVLFACHGAVIGGAIDMITAGDIRWCTKDAYFCIMEINIAMTADVGTFPR LQRYIPEGWVKELAYTGRKIDAAKAKEIGLVNDIYDTHEELIAGVMATAREIASKNPLAVTGSKVLINYGRDHTTAETLD YIGLWNTAMFPPPHMAEAFAARAEKREPVFPDLAPVRTEPM
Sequences:
>Translated_281_residues MLKDTYEAFKVTIEDKVAHIQMSRPEAMNTMNKAFWNELPEIVRTIDNNALARVIVISSTGKHFSAGMDTSVFTTPRPAA DHDRFVMAEAFRLNVKAIQSSFNCMEEARVPVLFACHGAVIGGAIDMITAGDIRWCTKDAYFCIMEINIAMTADVGTFPR LQRYIPEGWVKELAYTGRKIDAAKAKEIGLVNDIYDTHEELIAGVMATAREIASKNPLAVTGSKVLINYGRDHTTAETLD YIGLWNTAMFPPPHMAEAFAARAEKREPVFPDLAPVRTEPM >Mature_281_residues MLKDTYEAFKVTIEDKVAHIQMSRPEAMNTMNKAFWNELPEIVRTIDNNALARVIVISSTGKHFSAGMDTSVFTTPRPAA DHDRFVMAEAFRLNVKAIQSSFNCMEEARVPVLFACHGAVIGGAIDMITAGDIRWCTKDAYFCIMEINIAMTADVGTFPR LQRYIPEGWVKELAYTGRKIDAAKAKEIGLVNDIYDTHEELIAGVMATAREIASKNPLAVTGSKVLINYGRDHTTAETLD YIGLWNTAMFPPPHMAEAFAARAEKREPVFPDLAPVRTEPM
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI70995211, Length=267, Percent_Identity=38.5767790262172, Blast_Score=192, Evalue=2e-49, Organism=Homo sapiens, GI194097323, Length=263, Percent_Identity=25.8555133079848, Blast_Score=81, Evalue=9e-16, Organism=Escherichia coli, GI221142681, Length=270, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI87082183, Length=269, Percent_Identity=25.2788104089219, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788682, Length=218, Percent_Identity=27.0642201834862, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787659, Length=260, Percent_Identity=22.3076923076923, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1790281, Length=199, Percent_Identity=23.6180904522613, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17534483, Length=278, Percent_Identity=32.7338129496403, Blast_Score=181, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17536985, Length=267, Percent_Identity=29.2134831460674, Blast_Score=155, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17554946, Length=259, Percent_Identity=26.2548262548263, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17540714, Length=230, Percent_Identity=26.0869565217391, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI25145438, Length=254, Percent_Identity=25.1968503937008, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI19920382, Length=261, Percent_Identity=37.5478927203065, Blast_Score=175, Evalue=3e-44, Organism=Drosophila melanogaster, GI24653139, Length=262, Percent_Identity=28.2442748091603, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI20129971, Length=260, Percent_Identity=23.8461538461538, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24653477, Length=260, Percent_Identity=23.8461538461538, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 31248; Mature: 31248
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKDTYEAFKVTIEDKVAHIQMSRPEAMNTMNKAFWNELPEIVRTIDNNALARVIVISST CCCCCCHHHEEEEEHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC GKHFSAGMDTSVFTTPRPAADHDRFVMAEAFRLNVKAIQSSFNCMEEARVPVLFACHGAV CCCCCCCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHH IGGAIDMITAGDIRWCTKDAYFCIMEINIAMTADVGTFPRLQRYIPEGWVKELAYTGRKI HCCHHHEEECCCCEEECCCCEEEEEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCC DAAKAKEIGLVNDIYDTHEELIAGVMATAREIASKNPLAVTGSKVLINYGRDHTTAETLD CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCHHHHHH YIGLWNTAMFPPPHMAEAFAARAEKREPVFPDLAPVRTEPM HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLKDTYEAFKVTIEDKVAHIQMSRPEAMNTMNKAFWNELPEIVRTIDNNALARVIVISST CCCCCCHHHEEEEEHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC GKHFSAGMDTSVFTTPRPAADHDRFVMAEAFRLNVKAIQSSFNCMEEARVPVLFACHGAV CCCCCCCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHH IGGAIDMITAGDIRWCTKDAYFCIMEINIAMTADVGTFPRLQRYIPEGWVKELAYTGRKI HCCHHHEEECCCCEEECCCCEEEEEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCC DAAKAKEIGLVNDIYDTHEELIAGVMATAREIASKNPLAVTGSKVLINYGRDHTTAETLD CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCHHHHHH YIGLWNTAMFPPPHMAEAFAARAEKREPVFPDLAPVRTEPM HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA