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The map label for this gene is chrR [H]

Identifier: 114799135

GI number: 114799135

Start: 3479756

End: 3480430

Strand: Reverse

Name: chrR [H]

Synonym: HNE_3327

Alternate gene names: 114799135

Gene position: 3480430-3479756 (Counterclockwise)

Preceding gene: 114798215

Following gene: 114798574

Centisome position: 93.94

GC content: 61.93

Gene sequence:

>675_bases
ATGACTTCTGACTCTCCAAACAGTTTCAGCGAACTCTACAGCGCGTATGCGGCCGGCTGTATCGATCCGGCCTTTGCGCT
GATGCTGGAGGCCCAGAGCCTGATGCGCTCTGATGTCCGCCGCTCTGTGGCAATGAGCGAGATGATTTCCGGCAGCTTTC
TTGACAGCGCCCCGGCGGCGCGGATGCGGGATGGCGCGCTGGAGCGAACGCTGGCTAAGATTGACGCGATTGAGGCGCGG
CCGGAACAACAGCGGGCTGCTGGCAAGGCGGCGGGCGGCGCGATCAACGAAATTCTTGAGCTTCCGGAGCCTGTACGCGG
CGCCGCCATCAATGCGGTGGGCAAGCAGGGCTGGCAGATTGTTAGCCTTGGGCTGAAGCGGCTGAAACTGGATGTCGGCT
CGGCCATGGAGGTAGAGCTTTACCGCATCAATGCGGGCAGCAAGATTCCGCGCCACTCGCATGGTGGAACTGAATTTACC
ATGGTGCTCTCAGGCGGGTTTTCGGACGAGCGGGGCAGCTATGGTCCCGGAGATGTCTGCGTGAAAGGGCCAAGCGATAT
TCACCAGCCCGTCGCGGACGATGATGAAGTCTGCTACGCGCTTGCCGTGCGCGATGGCGGCCTGCGCTTTACCGGGATGC
TGGGCATGGTCCAGAGACTTCTCGGCGGGCACTGA

Upstream 100 bases:

>100_bases
GCGGCATCTAGCCGGGTAACTGCATTCTCCGGCGGCGTTTGCTTGACGAAACCCGAAACCGGACAATCTTGCCTGAAGGA
TACGGGACTTTCTGACGATT

Downstream 100 bases:

>100_bases
AGTTTTCAGAAGTTCGGCCGTTCACCCTTCAGGCTTCTGTCTGTCCGGTCCCGGAACATGCTTGCGGCGGCGCGCGCCAT
CCGGCCCGCCCGGCATGATG

Product: ChR family anti-sigma factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTSDSPNSFSELYSAYAAGCIDPAFALMLEAQSLMRSDVRRSVAMSEMISGSFLDSAPAARMRDGALERTLAKIDAIEAR
PEQQRAAGKAAGGAINEILELPEPVRGAAINAVGKQGWQIVSLGLKRLKLDVGSAMEVELYRINAGSKIPRHSHGGTEFT
MVLSGGFSDERGSYGPGDVCVKGPSDIHQPVADDDEVCYALAVRDGGLRFTGMLGMVQRLLGGH

Sequences:

>Translated_224_residues
MTSDSPNSFSELYSAYAAGCIDPAFALMLEAQSLMRSDVRRSVAMSEMISGSFLDSAPAARMRDGALERTLAKIDAIEAR
PEQQRAAGKAAGGAINEILELPEPVRGAAINAVGKQGWQIVSLGLKRLKLDVGSAMEVELYRINAGSKIPRHSHGGTEFT
MVLSGGFSDERGSYGPGDVCVKGPSDIHQPVADDDEVCYALAVRDGGLRFTGMLGMVQRLLGGH
>Mature_223_residues
TSDSPNSFSELYSAYAAGCIDPAFALMLEAQSLMRSDVRRSVAMSEMISGSFLDSAPAARMRDGALERTLAKIDAIEARP
EQQRAAGKAAGGAINEILELPEPVRGAAINAVGKQGWQIVSLGLKRLKLDVGSAMEVELYRINAGSKIPRHSHGGTEFTM
VLSGGFSDERGSYGPGDVCVKGPSDIHQPVADDDEVCYALAVRDGGLRFTGMLGMVQRLLGGH

Specific function: Anti-sigma factor that inhibits the activity of the extracytoplasmic function (ECF) sigma (E) factor, thereby indirectly regulating the transcription of the cycA and rpoE genes [H]

COG id: COG3806

COG function: function code T; Anti-sigma factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012807
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23758; Mature: 23627

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSDSPNSFSELYSAYAAGCIDPAFALMLEAQSLMRSDVRRSVAMSEMISGSFLDSAPAA
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHH
RMRDGALERTLAKIDAIEARPEQQRAAGKAAGGAINEILELPEPVRGAAINAVGKQGWQI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHCCHHH
VSLGLKRLKLDVGSAMEVELYRINAGSKIPRHSHGGTEFTMVLSGGFSDERGSYGPGDVC
HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEE
VKGPSDIHQPVADDDEVCYALAVRDGGLRFTGMLGMVQRLLGGH
ECCCHHHHCCCCCCCCEEEEEEEECCCEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSDSPNSFSELYSAYAAGCIDPAFALMLEAQSLMRSDVRRSVAMSEMISGSFLDSAPAA
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHH
RMRDGALERTLAKIDAIEARPEQQRAAGKAAGGAINEILELPEPVRGAAINAVGKQGWQI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHCCHHH
VSLGLKRLKLDVGSAMEVELYRINAGSKIPRHSHGGTEFTMVLSGGFSDERGSYGPGDVC
HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEE
VKGPSDIHQPVADDDEVCYALAVRDGGLRFTGMLGMVQRLLGGH
ECCCHHHHCCCCCCCCEEEEEEEECCCEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721683 [H]