Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is hflK [H]
Identifier: 114799007
GI number: 114799007
Start: 462082
End: 463248
Strand: Direct
Name: hflK [H]
Synonym: HNE_0469
Alternate gene names: 114799007
Gene position: 462082-463248 (Clockwise)
Preceding gene: 114799910
Following gene: 114799745
Centisome position: 12.47
GC content: 63.07
Gene sequence:
>1167_bases ATGCCCTGGGACGATAAGACAAAAGGCTCTGGCCCTTGGGGCGGAGGCGGCTCGGGCAACGGTGGCGGCGAGGGGGGCTC CCCGTGGAACCGTCCCGGCAAACCCGATGCCGGCAAGGAAAAAGACCAGCCTGCAGACCTTGAAGAGCAGATGCGCCGCA TGCAGGAGCGCTTTCGTCAGCGCCGGGGCGGCGGTGGCGGACGCAAGGGCGGCGGCAGCGGTGGTGGTGGCGGCGGTCTC GGCCGCGGCGCTGGCCCGCTCGGTGTCCTTGTCATTGTTGGCGTCGCGCTTCTGGCCTGGCTCTCGACCAGCGTTGTCGT CGTTGACCCGACCCAGCAGGCAGCGGTCTTCCGGTTTGGCAAATGGCAGGCAAATTACGGCCCAGGCCTCCACTTCCACC TGCCCGCGCCGTTGGAAAACCACCGCCTTATCCAGGTGGAAACCCGCAACGAAACCCGCATCGGCGCGACGGAAGACGAA AGCCTGATGCTGACGCAGGACGAAAACATCGTCGACATCCATTTTTCGATCATCTGGAAAGTCGATACCCAGAACCCTGA GAACTACGTGCTCAATGTTCGCGATCCCGACAGCACGGTCGCCATGGTCGGCGAGTCCGTGATGCGTGAAGTGGTCGGCA AGACCCGCCTTCAGGACATCATCACCACCCAGCGTGACGAGGTCCAGTTGCAGGTGGTCGAGCAGACCCAGGCACTGCTC AACGAGTATCGCGCCGGCGTGCAGATTCTGCAGGTCCAGATCGGCAAGGCAGACCCGCCTCAGCCGGTCATCGAGGCGTT CAACGACGTTAACGTTGCCGAGCAGGACGCCGAAACCCTGACCAACCGTGCCACGCAGTTCGCCAACGAAATCGTTCCGC AGGCTCGCGGTACCGCTTCGCGCCTGCAACAGGAATCGGAAGCCTACCGCGACCAGATTGTGGCCGACGCAAACGGTGAA GCCGCCCGCTTTGACCAGATCTATGCGGAATACATCAAGGCGCCCCGCGTCACGCGGGAACGCATGTATCTTGAAACCAT GGAACGTGTTCTGGAGCGGTCGGACAAATTGCTGATCGATCAGGATTCCGGCGCGGTGCCCTATCTGCCGATTGAACGAA CGCGGCCCCAGCCCGCGGCTCCGGCGAGCAATGGAGGAGACCGCTAA
Upstream 100 bases:
>100_bases GCCCGAATGCGTCATTTTTGCTGCGCCTGAAAGGCGATTTAGCGTGCACAGCGCATTAGACGCTCTATATAGGCGGGAAA CGCAAATTTCAGGAGGGTGA
Downstream 100 bases:
>100_bases TGCGTGCTTTTGGTTGGCTCATTCTGATCCTGTCCATCGTTGGACTGATCATCGCTTCAAACGTATTCTTCATCGTCCGC CAGTCGGAACAGGCCATCGT
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MPWDDKTKGSGPWGGGGSGNGGGEGGSPWNRPGKPDAGKEKDQPADLEEQMRRMQERFRQRRGGGGGRKGGGSGGGGGGL GRGAGPLGVLVIVGVALLAWLSTSVVVVDPTQQAAVFRFGKWQANYGPGLHFHLPAPLENHRLIQVETRNETRIGATEDE SLMLTQDENIVDIHFSIIWKVDTQNPENYVLNVRDPDSTVAMVGESVMREVVGKTRLQDIITTQRDEVQLQVVEQTQALL NEYRAGVQILQVQIGKADPPQPVIEAFNDVNVAEQDAETLTNRATQFANEIVPQARGTASRLQQESEAYRDQIVADANGE AARFDQIYAEYIKAPRVTRERMYLETMERVLERSDKLLIDQDSGAVPYLPIERTRPQPAAPASNGGDR
Sequences:
>Translated_388_residues MPWDDKTKGSGPWGGGGSGNGGGEGGSPWNRPGKPDAGKEKDQPADLEEQMRRMQERFRQRRGGGGGRKGGGSGGGGGGL GRGAGPLGVLVIVGVALLAWLSTSVVVVDPTQQAAVFRFGKWQANYGPGLHFHLPAPLENHRLIQVETRNETRIGATEDE SLMLTQDENIVDIHFSIIWKVDTQNPENYVLNVRDPDSTVAMVGESVMREVVGKTRLQDIITTQRDEVQLQVVEQTQALL NEYRAGVQILQVQIGKADPPQPVIEAFNDVNVAEQDAETLTNRATQFANEIVPQARGTASRLQQESEAYRDQIVADANGE AARFDQIYAEYIKAPRVTRERMYLETMERVLERSDKLLIDQDSGAVPYLPIERTRPQPAAPASNGGDR >Mature_387_residues PWDDKTKGSGPWGGGGSGNGGGEGGSPWNRPGKPDAGKEKDQPADLEEQMRRMQERFRQRRGGGGGRKGGGSGGGGGGLG RGAGPLGVLVIVGVALLAWLSTSVVVVDPTQQAAVFRFGKWQANYGPGLHFHLPAPLENHRLIQVETRNETRIGATEDES LMLTQDENIVDIHFSIIWKVDTQNPENYVLNVRDPDSTVAMVGESVMREVVGKTRLQDIITTQRDEVQLQVVEQTQALLN EYRAGVQILQVQIGKADPPQPVIEAFNDVNVAEQDAETLTNRATQFANEIVPQARGTASRLQQESEAYRDQIVADANGEA ARFDQIYAEYIKAPRVTRERMYLETMERVLERSDKLLIDQDSGAVPYLPIERTRPQPAAPASNGGDR
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=287, Percent_Identity=31.7073170731707, Blast_Score=159, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 42386; Mature: 42255
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWDDKTKGSGPWGGGGSGNGGGEGGSPWNRPGKPDAGKEKDQPADLEEQMRRMQERFRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RRGGGGGRKGGGSGGGGGGLGRGAGPLGVLVIVGVALLAWLSTSVVVVDPTQQAAVFRFG HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHC KWQANYGPGLHFHLPAPLENHRLIQVETRNETRIGATEDESLMLTQDENIVDIHFSIIWK CEECCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEE VDTQNPENYVLNVRDPDSTVAMVGESVMREVVGKTRLQDIITTQRDEVQLQVVEQTQALL EECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NEYRAGVQILQVQIGKADPPQPVIEAFNDVNVAEQDAETLTNRATQFANEIVPQARGTAS HHHHHCEEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH RLQQESEAYRDQIVADANGEAARFDQIYAEYIKAPRVTRERMYLETMERVLERSDKLLID HHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEE QDSGAVPYLPIERTRPQPAAPASNGGDR CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PWDDKTKGSGPWGGGGSGNGGGEGGSPWNRPGKPDAGKEKDQPADLEEQMRRMQERFRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RRGGGGGRKGGGSGGGGGGLGRGAGPLGVLVIVGVALLAWLSTSVVVVDPTQQAAVFRFG HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHC KWQANYGPGLHFHLPAPLENHRLIQVETRNETRIGATEDESLMLTQDENIVDIHFSIIWK CEECCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEE VDTQNPENYVLNVRDPDSTVAMVGESVMREVVGKTRLQDIITTQRDEVQLQVVEQTQALL EECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NEYRAGVQILQVQIGKADPPQPVIEAFNDVNVAEQDAETLTNRATQFANEIVPQARGTAS HHHHHCEEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH RLQQESEAYRDQIVADANGEAARFDQIYAEYIKAPRVTRERMYLETMERVLERSDKLLID HHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEE QDSGAVPYLPIERTRPQPAAPASNGGDR CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]