| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is purM [H]
Identifier: 114798932
GI number: 114798932
Start: 2366903
End: 2367931
Strand: Direct
Name: purM [H]
Synonym: HNE_2263
Alternate gene names: 114798932
Gene position: 2366903-2367931 (Clockwise)
Preceding gene: 114797633
Following gene: 114797986
Centisome position: 63.88
GC content: 64.92
Gene sequence:
>1029_bases ATGAACACGCCGTCCAAGACGCCTCTCTCTTATCGTGACGCTGGTGTCGATATTGAGGCAGGCGAGCGCCTCGTTGATGC CATCTCCCCCATGGCCAAGGCCACCGCACGCGCCGGCGTGATGGGCGGGCTGGGCGGATTTGGCGCCCTGTTTGATCTCA AGGCCGCAGGCTTCAACGATCCGATCCTCGTCTCGGGCACAGATGGCGTCGGCACCAAGCTGATGCTCGCCTTCGAGACC GGCATCCACAACACCGTCGGCATCGATCTGGTCGCCATGTGCGCCAATGACGTGCTGGCCCAAGGCGCAGAGCCGCTGTT TTTCCTCGATTATTTTGCTACCGGCAAGCTCGAAGGCGGCATCGCAGAAGCCGTCATCGCGGGCATCGCCGAAGGTTGCC GCCGGTCGGGCTGCGCCCTTGTGGGCGGCGAAACCGCCGAAATGCCCGGCATGTATCCCCCCGGCCATTACGATCTGGCT GGTTTCGTCGTCGGCGCTGTCGACCGGGAAAAAGTGCTCCCCCGCATGGGCGACATGACGCCCGGCGACACGCTGATCGG CATCGCCTCTTCGGGGCCCCACTCAAATGGCTATTCCCTGATCCGCCGCATCGTGGAGCGCGAAGGCCTCTTCTATGGCG GTCCCTCGCCCTTCTCCAATTCCGAGACGCTGGGTGAAGCGTTGCTGACGCCGACGCGCCTTTATGCACCGCTCGTCATG CCGCTGATCCGCTCGGGCCGCATCAAGGGCCTTGCCCATATCACCGGCGGCGGCATCACCGAGAACACCCCCCGCATGTG CCCGGACACCCTCGTGCCCCGCATCGACCGCGCCGCCTGGACCCCGCCCCCGGTGTTCCACTGGTTGCAGGAAGCCGGAC AGGTGGACCTGGAAGAAATGCACCGCACCTTCAATATGGGCATCGGCCTTGTTCTCGCCGTCGCGCCCGAAGAGGCAGAC GCCGTGATCGCAGACCTGAAAGCGGCGGGCGAAGACGCGCGCGTTCTCGGTGAGCTTGCCAGCGCATGA
Upstream 100 bases:
>100_bases ATACGGGAACCGGCTGCTTCACTTCTGATCCTTCACTGGAACTTGGGCCATCCTCATGCTAACGCGCCGATTCAGGTAAA CTGAGGGGCTAGAATCCAAG
Downstream 100 bases:
>100_bases CGCGCCTCAATCTGGCGATCCTGATTTCAGGCCGCGGCTCCAATATGGAGGCCCTGCTGAGCGCCGCCGAAGACCCGGCC TATCCGGCAAAGCCCGTTCT
Product: phosphoribosylformylglycinamidine cyclo-ligase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MNTPSKTPLSYRDAGVDIEAGERLVDAISPMAKATARAGVMGGLGGFGALFDLKAAGFNDPILVSGTDGVGTKLMLAFET GIHNTVGIDLVAMCANDVLAQGAEPLFFLDYFATGKLEGGIAEAVIAGIAEGCRRSGCALVGGETAEMPGMYPPGHYDLA GFVVGAVDREKVLPRMGDMTPGDTLIGIASSGPHSNGYSLIRRIVEREGLFYGGPSPFSNSETLGEALLTPTRLYAPLVM PLIRSGRIKGLAHITGGGITENTPRMCPDTLVPRIDRAAWTPPPVFHWLQEAGQVDLEEMHRTFNMGIGLVLAVAPEEAD AVIADLKAAGEDARVLGELASA
Sequences:
>Translated_342_residues MNTPSKTPLSYRDAGVDIEAGERLVDAISPMAKATARAGVMGGLGGFGALFDLKAAGFNDPILVSGTDGVGTKLMLAFET GIHNTVGIDLVAMCANDVLAQGAEPLFFLDYFATGKLEGGIAEAVIAGIAEGCRRSGCALVGGETAEMPGMYPPGHYDLA GFVVGAVDREKVLPRMGDMTPGDTLIGIASSGPHSNGYSLIRRIVEREGLFYGGPSPFSNSETLGEALLTPTRLYAPLVM PLIRSGRIKGLAHITGGGITENTPRMCPDTLVPRIDRAAWTPPPVFHWLQEAGQVDLEEMHRTFNMGIGLVLAVAPEEAD AVIADLKAAGEDARVLGELASA >Mature_342_residues MNTPSKTPLSYRDAGVDIEAGERLVDAISPMAKATARAGVMGGLGGFGALFDLKAAGFNDPILVSGTDGVGTKLMLAFET GIHNTVGIDLVAMCANDVLAQGAEPLFFLDYFATGKLEGGIAEAVIAGIAEGCRRSGCALVGGETAEMPGMYPPGHYDLA GFVVGAVDREKVLPRMGDMTPGDTLIGIASSGPHSNGYSLIRRIVEREGLFYGGPSPFSNSETLGEALLTPTRLYAPLVM PLIRSGRIKGLAHITGGGITENTPRMCPDTLVPRIDRAAWTPPPVFHWLQEAGQVDLEEMHRTFNMGIGLVLAVAPEEAD AVIADLKAAGEDARVLGELASA
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=334, Percent_Identity=55.9880239520958, Blast_Score=397, Evalue=1e-111, Organism=Homo sapiens, GI209869995, Length=334, Percent_Identity=55.9880239520958, Blast_Score=397, Evalue=1e-111, Organism=Homo sapiens, GI209869993, Length=334, Percent_Identity=55.9880239520958, Blast_Score=397, Evalue=1e-111, Organism=Escherichia coli, GI1788845, Length=338, Percent_Identity=53.2544378698225, Blast_Score=347, Evalue=7e-97, Organism=Caenorhabditis elegans, GI17567511, Length=348, Percent_Identity=45.1149425287356, Blast_Score=285, Evalue=3e-77, Organism=Saccharomyces cerevisiae, GI6321203, Length=338, Percent_Identity=53.8461538461538, Blast_Score=372, Evalue=1e-104, Organism=Drosophila melanogaster, GI24582400, Length=286, Percent_Identity=45.1048951048951, Blast_Score=259, Evalue=2e-69,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 35692; Mature: 35692
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPSKTPLSYRDAGVDIEAGERLVDAISPMAKATARAGVMGGLGGFGALFDLKAAGFND CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC PILVSGTDGVGTKLMLAFETGIHNTVGIDLVAMCANDVLAQGAEPLFFLDYFATGKLEGG CEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCH IAEAVIAGIAEGCRRSGCALVGGETAEMPGMYPPGHYDLAGFVVGAVDREKVLPRMGDMT HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCC PGDTLIGIASSGPHSNGYSLIRRIVEREGLFYGGPSPFSNSETLGEALLTPTRLYAPLVM CCCEEEEEECCCCCCCHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHCHHHHHHHHHH PLIRSGRIKGLAHITGGGITENTPRMCPDTLVPRIDRAAWTPPPVFHWLQEAGQVDLEEM HHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH HRTFNMGIGLVLAVAPEEADAVIADLKAAGEDARVLGELASA HHHHHCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MNTPSKTPLSYRDAGVDIEAGERLVDAISPMAKATARAGVMGGLGGFGALFDLKAAGFND CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC PILVSGTDGVGTKLMLAFETGIHNTVGIDLVAMCANDVLAQGAEPLFFLDYFATGKLEGG CEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCCH IAEAVIAGIAEGCRRSGCALVGGETAEMPGMYPPGHYDLAGFVVGAVDREKVLPRMGDMT HHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCC PGDTLIGIASSGPHSNGYSLIRRIVEREGLFYGGPSPFSNSETLGEALLTPTRLYAPLVM CCCEEEEEECCCCCCCHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHCHHHHHHHHHH PLIRSGRIKGLAHITGGGITENTPRMCPDTLVPRIDRAAWTPPPVFHWLQEAGQVDLEEM HHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHH HRTFNMGIGLVLAVAPEEADAVIADLKAAGEDARVLGELASA HHHHHCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA