| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is yrrI [H]
Identifier: 114798789
GI number: 114798789
Start: 1081472
End: 1082521
Strand: Reverse
Name: yrrI [H]
Synonym: HNE_1074
Alternate gene names: 114798789
Gene position: 1082521-1081472 (Counterclockwise)
Preceding gene: 114799641
Following gene: 114797803
Centisome position: 29.22
GC content: 64.86
Gene sequence:
>1050_bases ATGTCCGGAAGCCCTAATCTTTCAGGCTTTACCGCCCGCCTTGTGCTCGTGCTGTTTATCGGCGGCATTGCGCTGGCGGC ATGGGTTGTGCGCGACGCATTCCTGTTGATGTTTGCCGCCACGCTGCTGGCCATCGCCGTTCACGGAATCGCTGACGCGC TCACCCGCGCCGCGCCGCTGCCAAGGCAAGGCGCTTTGGCCGCCGCCGCGCTGCTCATGACCGGCAGCGTCGCCGCCATC CTCTGGATATTCGGCGCCCAGCTTGCCAGCGAGCTTTCAGGCGTCACTGACCGGCTCCCCGGCGCCTGGCAGCGCGCAAA AGAAACCCTGGAGGCCCATCCCGCCGGGTCCGCCCTCGTCGCGGAAATCGAAGCGGTTGCAGCAGGCGACTCGGGCGGCT CTTTACGCGGTATGCTGACGGATGCCGGCGGCTACGCCCTGCCCTTTGCTTCGGGGCTCACCTCTGCGCTTCTGGTCATC TTCATTGCAGCCTTCCTGACCACCTCTGCGGTTTCCACCCGTAACGGCGTCCTGCTCGTGTTGCCCAAGGGCGTCGACGA AAAAGTCGGCAAGGCGCTCAACGCATCCGGGCGCGCCCTGAAAAGATGGCTGCTCGGTATTTCCATCGACATGGTGATCA TCACCGCCGTGATGGCGCTGACGCTCTGGCTGCTCGGTGTTCCGGCCTTCCTCGGCCTGGCGCTGATTGCGGGCCTGGCG CAGTTCGTGCCCACCGTCGGCCCGCTTCTGGCTGCCGTCCCCGGCGTACTGCTGGCCTTCACCGTCAGCCCGATGACCGC CCTGTGGACCGCCATTGCCTATTTCACGGTGTCCCAGCTGGAGGCAAACCTCGTCTATCCCCTGATCCAGAAGGAAACGA CCTCCATCTCCCCGGCGCTGAACCTGTTTGCCATTCTGGCCTTTGGCATGCTGCTCGGCCCGCTCGGCGTCCTGCTGGCA ACGCCCATCCTCGTCGTTCTCTCGGTCTTCGTCATCCAGCTCTATGTGCAGGATACGCTCGGCAAGGAGGCAGACATCCC CGGCGCCTGA
Upstream 100 bases:
>100_bases AGAATTTTCCGCTTGAATTTCCTGCCCGCGGTGTATGCTAATCCATCTCGAGATTGCATTTTGTTGACTGATCCCACCCC TGCCAGGAGGACCTTCCCGT
Downstream 100 bases:
>100_bases CCCCGCCCCACACTCACAACAAGATCGGCCCCCCATTTTGCGCTTATTTCTCAAAATAGTTTGCGCGCGCCCCCGCCAGT CCCGCGCCTTGGTTCAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MSGSPNLSGFTARLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPLPRQGALAAAALLMTGSVAAI LWIFGAQLASELSGVTDRLPGAWQRAKETLEAHPAGSALVAEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVI FIAAFLTTSAVSTRNGVLLVLPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLALIAGLA QFVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTSISPALNLFAILAFGMLLGPLGVLLA TPILVVLSVFVIQLYVQDTLGKEADIPGA
Sequences:
>Translated_349_residues MSGSPNLSGFTARLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPLPRQGALAAAALLMTGSVAAI LWIFGAQLASELSGVTDRLPGAWQRAKETLEAHPAGSALVAEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVI FIAAFLTTSAVSTRNGVLLVLPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLALIAGLA QFVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTSISPALNLFAILAFGMLLGPLGVLLA TPILVVLSVFVIQLYVQDTLGKEADIPGA >Mature_348_residues SGSPNLSGFTARLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPLPRQGALAAAALLMTGSVAAIL WIFGAQLASELSGVTDRLPGAWQRAKETLEAHPAGSALVAEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVIF IAAFLTTSAVSTRNGVLLVLPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLALIAGLAQ FVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTSISPALNLFAILAFGMLLGPLGVLLAT PILVVLSVFVIQLYVQDTLGKEADIPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 35802; Mature: 35671
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSPNLSGFTARLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRQGALAAAALLMTGSVAAILWIFGAQLASELSGVTDRLPGAWQRAKETLEAHPAGSALV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH AEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVIFIAAFLTTSAVSTRNGVLLV HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE LPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLALIAGLA ECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTSISPAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH NLFAILAFGMLLGPLGVLLATPILVVLSVFVIQLYVQDTLGKEADIPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SGSPNLSGFTARLVLVLFIGGIALAAWVVRDAFLLMFAATLLAIAVHGIADALTRAAPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PRQGALAAAALLMTGSVAAILWIFGAQLASELSGVTDRLPGAWQRAKETLEAHPAGSALV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH AEIEAVAAGDSGGSLRGMLTDAGGYALPFASGLTSALLVIFIAAFLTTSAVSTRNGVLLV HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE LPKGVDEKVGKALNASGRALKRWLLGISIDMVIITAVMALTLWLLGVPAFLGLALIAGLA ECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFVPTVGPLLAAVPGVLLAFTVSPMTALWTAIAYFTVSQLEANLVYPLIQKETTSISPAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH NLFAILAFGMLLGPLGVLLATPILVVLSVFVIQLYVQDTLGKEADIPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]