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The map label for this gene is ctpA [H]

Identifier: 114798612

GI number: 114798612

Start: 3381599

End: 3382948

Strand: Reverse

Name: ctpA [H]

Synonym: HNE_3209

Alternate gene names: 114798612

Gene position: 3382948-3381599 (Counterclockwise)

Preceding gene: 114797629

Following gene: 114799786

Centisome position: 91.31

GC content: 61.63

Gene sequence:

>1350_bases
ATGCGTTCATTGCTGACCGGAACAGCCCTGGGTGGAGTTCTGGGGGCGCTGACGGTGGGCTTCGCCGCGATGGCCTGGCC
GCAAGGGCAGGACGCGCCCGCGCCGCCGGAAGATCCACGCGTCGCGACCTATCAGCAGATTGAACTGTTCGCGGAAATTT
TCGCGCGCGCTCAGCGGGACTATGTAGTTCCCATTGATGAGCGCGAGGCGATGGAGTCCGCGATCAATGGCATGCTCACC
TCCCTCGACCCGCATTCCAGCTATATGGACCCGGAAGATTTCCGCTCCCTTCAGGTGCAGACCTCGGGCGAATATGGCGG
CCTTGGCATCGAAGTGACGATGGAAGACGGCTTCGTGAAAGTCATCTCCCCGATCGACGACACGCCTGCCGAGCGCGCTG
GCATCCAGCCGGGCGACTATATCACCGAGATCAACGGCCAGCCCATCATCGGGCAGACGCTGAACGATGCCGTGAAGGAA
ATGCGCGGCGAAAAAGGCACCGAGATCGAAATCACGATCCTGCGCGAAGGCGTTGATCCATTCCAGGTCACGCTGGTGCG
CGATGTGGTGCAGCAGAAATCCGTCACGTGGAAAAAAGAGGCAAACGACATTGCCTATATCCGCGTCTCCACCTTCAATG
AGCGCACCGGCACACTTCTGGAAGAAGCGGTTGAAGGGATCAATCGCGAGATCGGCGCCCGGCCAAAGGGTATCGTTCTA
GACCTGCGCAACAATGGCGGCGGTCTGCTGGATGAGGCCGTGAAAGTTTCGGACTTCTTCCTCTCGGGAGGAGAGGTCGT
CTCGACCCAGGGGCGCCGGCCGATTGATGTTGAACGCCGCAACGCTACCAAGGCCGAAGTGTTCAAGGACGTCCCCCTCG
TCGTGCTGATCAATGGCGGTTCGGCTTCGGCCTCCGAGATCGTCGCGGGCGCGTTGCAGGATCGGGGACGGGCACTCGTC
GTCGGCACAACCAGCTTTGGCAAGGGGTCGGTTCAGTCCGTCATTCCGCTGGGCGCCGACCGCGGCGCGATCCGTCTGAC
CACGGCGCGCTACTACACGCCCTCGGGACGCTCGATTCAGGCGCTCGGTATCGAACCGGACATCATGATCACCCCGGTTC
GCCTCACCGAGGAAGAACTGGCCAAGATCCAGCGCTTCTCAGAAGCTGATCTTCCACACGCCCTGGCCAACGAGTCCGGC
ATAGAGCGGGCCAAACTGCGCATGCCCGATGAGCAGCCGCCAGAAGGGTTTGAAGGGGAAGACTTCCAGCTCGACCGGGC
GCTTCAGCTTTTGCAGGAGGGCCGGGCTTCCGCGTCGCGCCTGGCAATGCAGGAAGATAAAGCCGGTTAA

Upstream 100 bases:

>100_bases
TCACGCTGGAATTAAGGCTTGGCGACAGGGTCCTTAATCCTGCAGAGTGGTTGTCGCGTGGCGGCTGATCCGCCGTGTGA
GGATGAAGATGGAGTGGAAT

Downstream 100 bases:

>100_bases
CGAATTCCACTGCATAAAGGCGGAATTCCTTTCTCATCGGTAAGTGTCTGTTTGCCTCCTGTTAACCCTGCCCGGCGATC
CTGAACGCTGCTTTCCCGCA

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MRSLLTGTALGGVLGALTVGFAAMAWPQGQDAPAPPEDPRVATYQQIELFAEIFARAQRDYVVPIDEREAMESAINGMLT
SLDPHSSYMDPEDFRSLQVQTSGEYGGLGIEVTMEDGFVKVISPIDDTPAERAGIQPGDYITEINGQPIIGQTLNDAVKE
MRGEKGTEIEITILREGVDPFQVTLVRDVVQQKSVTWKKEANDIAYIRVSTFNERTGTLLEEAVEGINREIGARPKGIVL
DLRNNGGGLLDEAVKVSDFFLSGGEVVSTQGRRPIDVERRNATKAEVFKDVPLVVLINGGSASASEIVAGALQDRGRALV
VGTTSFGKGSVQSVIPLGADRGAIRLTTARYYTPSGRSIQALGIEPDIMITPVRLTEEELAKIQRFSEADLPHALANESG
IERAKLRMPDEQPPEGFEGEDFQLDRALQLLQEGRASASRLAMQEDKAG

Sequences:

>Translated_449_residues
MRSLLTGTALGGVLGALTVGFAAMAWPQGQDAPAPPEDPRVATYQQIELFAEIFARAQRDYVVPIDEREAMESAINGMLT
SLDPHSSYMDPEDFRSLQVQTSGEYGGLGIEVTMEDGFVKVISPIDDTPAERAGIQPGDYITEINGQPIIGQTLNDAVKE
MRGEKGTEIEITILREGVDPFQVTLVRDVVQQKSVTWKKEANDIAYIRVSTFNERTGTLLEEAVEGINREIGARPKGIVL
DLRNNGGGLLDEAVKVSDFFLSGGEVVSTQGRRPIDVERRNATKAEVFKDVPLVVLINGGSASASEIVAGALQDRGRALV
VGTTSFGKGSVQSVIPLGADRGAIRLTTARYYTPSGRSIQALGIEPDIMITPVRLTEEELAKIQRFSEADLPHALANESG
IERAKLRMPDEQPPEGFEGEDFQLDRALQLLQEGRASASRLAMQEDKAG
>Mature_449_residues
MRSLLTGTALGGVLGALTVGFAAMAWPQGQDAPAPPEDPRVATYQQIELFAEIFARAQRDYVVPIDEREAMESAINGMLT
SLDPHSSYMDPEDFRSLQVQTSGEYGGLGIEVTMEDGFVKVISPIDDTPAERAGIQPGDYITEINGQPIIGQTLNDAVKE
MRGEKGTEIEITILREGVDPFQVTLVRDVVQQKSVTWKKEANDIAYIRVSTFNERTGTLLEEAVEGINREIGARPKGIVL
DLRNNGGGLLDEAVKVSDFFLSGGEVVSTQGRRPIDVERRNATKAEVFKDVPLVVLINGGSASASEIVAGALQDRGRALV
VGTTSFGKGSVQSVIPLGADRGAIRLTTARYYTPSGRSIQALGIEPDIMITPVRLTEEELAKIQRFSEADLPHALANESG
IERAKLRMPDEQPPEGFEGEDFQLDRALQLLQEGRASASRLAMQEDKAG

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=341, Percent_Identity=31.0850439882698, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 48608; Mature: 48608

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLLTGTALGGVLGALTVGFAAMAWPQGQDAPAPPEDPRVATYQQIELFAEIFARAQRD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
YVVPIDEREAMESAINGMLTSLDPHSSYMDPEDFRSLQVQTSGEYGGLGIEVTMEDGFVK
EEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEECCCCCCEEEEEEECCCEEE
VISPIDDTPAERAGIQPGDYITEINGQPIIGQTLNDAVKEMRGEKGTEIEITILREGVDP
EECCCCCCCHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCH
FQVTLVRDVVQQKSVTWKKEANDIAYIRVSTFNERTGTLLEEAVEGINREIGARPKGIVL
HHHHHHHHHHHHHCCCEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEE
DLRNNGGGLLDEAVKVSDFFLSGGEVVSTQGRRPIDVERRNATKAEVFKDVPLVVLINGG
EEECCCCCHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCCHHHHHHCCCCEEEEECCC
SASASEIVAGALQDRGRALVVGTTSFGKGSVQSVIPLGADRGAIRLTTARYYTPSGRSIQ
CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEECCCCCCEEEEEEEEEECCCCCEEE
ALGIEPDIMITPVRLTEEELAKIQRFSEADLPHALANESGIERAKLRMPDEQPPEGFEGE
EECCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCHHCCCCCCCCCCCCCCCC
DFQLDRALQLLQEGRASASRLAMQEDKAG
CCCHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSLLTGTALGGVLGALTVGFAAMAWPQGQDAPAPPEDPRVATYQQIELFAEIFARAQRD
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
YVVPIDEREAMESAINGMLTSLDPHSSYMDPEDFRSLQVQTSGEYGGLGIEVTMEDGFVK
EEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEECCCCCCEEEEEEECCCEEE
VISPIDDTPAERAGIQPGDYITEINGQPIIGQTLNDAVKEMRGEKGTEIEITILREGVDP
EECCCCCCCHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCH
FQVTLVRDVVQQKSVTWKKEANDIAYIRVSTFNERTGTLLEEAVEGINREIGARPKGIVL
HHHHHHHHHHHHHCCCEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEE
DLRNNGGGLLDEAVKVSDFFLSGGEVVSTQGRRPIDVERRNATKAEVFKDVPLVVLINGG
EEECCCCCHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCCHHHHHHCCCCEEEEECCC
SASASEIVAGALQDRGRALVVGTTSFGKGSVQSVIPLGADRGAIRLTTARYYTPSGRSIQ
CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEECCCCCCEEEEEEEEEECCCCCEEE
ALGIEPDIMITPVRLTEEELAKIQRFSEADLPHALANESGIERAKLRMPDEQPPEGFEGE
EECCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHCCCCCCHHCCCCCCCCCCCCCCCC
DFQLDRALQLLQEGRASASRLAMQEDKAG
CCCHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]