Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797629

Identifier: 114797629

GI number: 114797629

Start: 3382981

End: 3384216

Strand: Reverse

Name: 114797629

Synonym: HNE_3210

Alternate gene names: NA

Gene position: 3384216-3382981 (Counterclockwise)

Preceding gene: 114799936

Following gene: 114798612

Centisome position: 91.34

GC content: 61.25

Gene sequence:

>1236_bases
ATGGCGCATTTTCCGCGCATGCGCTTTTTCCGCCCTTTGGTCCTCTCCTGTCTTGCGCTCGCCCTGACGGCTGCGGGGCC
GGACACCTATACGCGCCAGGATCTTGAGGCGCTGGAGAAGGAAAAACGCGCTGCCGAACAAAAACTTGAACAACTACAAT
CTACTGGCAAAAGCGCCGAACTCGATCTCCAGTCTCTGGATCAGGATCTTCTGGCCGCCGCCGCCGAAGCCCTTCGCCGG
GAAGAACAGGCTGTTTCGGCCGAGAAGGCGTTGATTGATCTGTCTGTAGAGCGGGAGCATGCCTCCACCCAACTCCTTGA
AAATGAAGCAGCTTATGAGGATCTGATCGCTGCGCTCGCCGCTGCAAACCGGCGCCGTCCACCGGCATTGGTTGTGTCTC
CGGGGCAATCGGGCACAGCGATCCGCCGCGCCATCCTGATGCAGACAACGCTGCCGGAACTGAGCGCGCGGGCCGAGCGG
ATTTCCGGCGAGATTGCCGCCCTCAACAAGCTGGAAGATCAGATCCGCACCGAGCAGGCCCGGCTCGATGCGGCTGAAGC
GACCATCGCCTTGAAAAAAGAGGAAATTGAGCGCTTGGCCGCGACGAAGCGCAGCCAGTATGAGGGGCTGTCTGGCGACG
TATCCACTTTGAAGGATCGCGCCCAGAAACTGGGCAAAGAGGCCGATACCCTGCGCGAACTTCTCTCTGCGCTGGAATCC
AGCGCGCCCGCCTCCCCCGGCACAAAGCCGAAGCAGCGCCCGCAGCTGGCATCCTTGAAGCCGGCGCCCAAGAGCGCGGT
TCCGGGCAAGTCCGTACCGGCAAAAACAGCGTCCAAACCGCTTGGCAAGTCGGCGCTGGGCGGTCTCGTTCAGCCTGTAT
CCGGCGATGTGCGCAACCGTTTCGGGGACAAGCTTTCTGGTGGCAGCATTGCAGAATGGGTCAGTTTTGAAACCCGCGCT
GAAGCTCAGGTCATCGCCCCGGTGGGCGGCACGGTCGAATATGCCCGGCCCTTCCGCAGCTACGGGTCCATGCTGATTCT
GCGTACAAGCGACGGCTATCATGTTATTCTGACAGGTATGAGCCGGATTTACGTATCCGAAGGCCAGGCCGTGACGGCGG
GTGAACCTGTTGGGCTTATGCCCGACCGCGCTGACCCGCCCCCCGAACTCACGCTGGAATTAAGGCTTGGCGACAGGGTC
CTTAATCCTGCAGAGTGGTTGTCGCGTGGCGGCTGA

Upstream 100 bases:

>100_bases
TGTTTTTGTCTCTGATTGACCGGGAATTGTCGTTGCTTGGCGCGGCATTGACCGCCCTTGGTGGCCGAATGTCTCATGAT
TAACGCCAAAGTGACGCCTC

Downstream 100 bases:

>100_bases
TCCGCCGTGTGAGGATGAAGATGGAGTGGAATATGCGTTCATTGCTGACCGGAACAGCCCTGGGTGGAGTTCTGGGGGCG
CTGACGGTGGGCTTCGCCGC

Product: M23 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MAHFPRMRFFRPLVLSCLALALTAAGPDTYTRQDLEALEKEKRAAEQKLEQLQSTGKSAELDLQSLDQDLLAAAAEALRR
EEQAVSAEKALIDLSVEREHASTQLLENEAAYEDLIAALAAANRRRPPALVVSPGQSGTAIRRAILMQTTLPELSARAER
ISGEIAALNKLEDQIRTEQARLDAAEATIALKKEEIERLAATKRSQYEGLSGDVSTLKDRAQKLGKEADTLRELLSALES
SAPASPGTKPKQRPQLASLKPAPKSAVPGKSVPAKTASKPLGKSALGGLVQPVSGDVRNRFGDKLSGGSIAEWVSFETRA
EAQVIAPVGGTVEYARPFRSYGSMLILRTSDGYHVILTGMSRIYVSEGQAVTAGEPVGLMPDRADPPPELTLELRLGDRV
LNPAEWLSRGG

Sequences:

>Translated_411_residues
MAHFPRMRFFRPLVLSCLALALTAAGPDTYTRQDLEALEKEKRAAEQKLEQLQSTGKSAELDLQSLDQDLLAAAAEALRR
EEQAVSAEKALIDLSVEREHASTQLLENEAAYEDLIAALAAANRRRPPALVVSPGQSGTAIRRAILMQTTLPELSARAER
ISGEIAALNKLEDQIRTEQARLDAAEATIALKKEEIERLAATKRSQYEGLSGDVSTLKDRAQKLGKEADTLRELLSALES
SAPASPGTKPKQRPQLASLKPAPKSAVPGKSVPAKTASKPLGKSALGGLVQPVSGDVRNRFGDKLSGGSIAEWVSFETRA
EAQVIAPVGGTVEYARPFRSYGSMLILRTSDGYHVILTGMSRIYVSEGQAVTAGEPVGLMPDRADPPPELTLELRLGDRV
LNPAEWLSRGG
>Mature_410_residues
AHFPRMRFFRPLVLSCLALALTAAGPDTYTRQDLEALEKEKRAAEQKLEQLQSTGKSAELDLQSLDQDLLAAAAEALRRE
EQAVSAEKALIDLSVEREHASTQLLENEAAYEDLIAALAAANRRRPPALVVSPGQSGTAIRRAILMQTTLPELSARAERI
SGEIAALNKLEDQIRTEQARLDAAEATIALKKEEIERLAATKRSQYEGLSGDVSTLKDRAQKLGKEADTLRELLSALESS
APASPGTKPKQRPQLASLKPAPKSAVPGKSVPAKTASKPLGKSALGGLVQPVSGDVRNRFGDKLSGGSIAEWVSFETRAE
AQVIAPVGGTVEYARPFRSYGSMLILRTSDGYHVILTGMSRIYVSEGQAVTAGEPVGLMPDRADPPPELTLELRLGDRVL
NPAEWLSRGG

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 44198; Mature: 44067

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHFPRMRFFRPLVLSCLALALTAAGPDTYTRQDLEALEKEKRAAEQKLEQLQSTGKSAE
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LDLQSLDQDLLAAAAEALRREEQAVSAEKALIDLSVEREHASTQLLENEAAYEDLIAALA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHHHHHHHHHHHHHHHHHHHHHHH
AANRRRPPALVVSPGQSGTAIRRAILMQTTLPELSARAERISGEIAALNKLEDQIRTEQA
HHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RLDAAEATIALKKEEIERLAATKRSQYEGLSGDVSTLKDRAQKLGKEADTLRELLSALES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
SAPASPGTKPKQRPQLASLKPAPKSAVPGKSVPAKTASKPLGKSALGGLVQPVSGDVRNR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCHHHHH
FGDKLSGGSIAEWVSFETRAEAQVIAPVGGTVEYARPFRSYGSMLILRTSDGYHVILTGM
CCCCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCEEEEECC
SRIYVSEGQAVTAGEPVGLMPDRADPPPELTLELRLGDRVLNPAEWLSRGG
HHEEEECCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCC
>Mature Secondary Structure 
AHFPRMRFFRPLVLSCLALALTAAGPDTYTRQDLEALEKEKRAAEQKLEQLQSTGKSAE
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LDLQSLDQDLLAAAAEALRREEQAVSAEKALIDLSVEREHASTQLLENEAAYEDLIAALA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHHHHHHHHHHHHHHHHHHHHHHH
AANRRRPPALVVSPGQSGTAIRRAILMQTTLPELSARAERISGEIAALNKLEDQIRTEQA
HHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RLDAAEATIALKKEEIERLAATKRSQYEGLSGDVSTLKDRAQKLGKEADTLRELLSALES
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
SAPASPGTKPKQRPQLASLKPAPKSAVPGKSVPAKTASKPLGKSALGGLVQPVSGDVRNR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCHHHHH
FGDKLSGGSIAEWVSFETRAEAQVIAPVGGTVEYARPFRSYGSMLILRTSDGYHVILTGM
CCCCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCEEEEECC
SRIYVSEGQAVTAGEPVGLMPDRADPPPELTLELRLGDRVLNPAEWLSRGG
HHEEEECCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]