| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797629
Identifier: 114797629
GI number: 114797629
Start: 3382981
End: 3384216
Strand: Reverse
Name: 114797629
Synonym: HNE_3210
Alternate gene names: NA
Gene position: 3384216-3382981 (Counterclockwise)
Preceding gene: 114799936
Following gene: 114798612
Centisome position: 91.34
GC content: 61.25
Gene sequence:
>1236_bases ATGGCGCATTTTCCGCGCATGCGCTTTTTCCGCCCTTTGGTCCTCTCCTGTCTTGCGCTCGCCCTGACGGCTGCGGGGCC GGACACCTATACGCGCCAGGATCTTGAGGCGCTGGAGAAGGAAAAACGCGCTGCCGAACAAAAACTTGAACAACTACAAT CTACTGGCAAAAGCGCCGAACTCGATCTCCAGTCTCTGGATCAGGATCTTCTGGCCGCCGCCGCCGAAGCCCTTCGCCGG GAAGAACAGGCTGTTTCGGCCGAGAAGGCGTTGATTGATCTGTCTGTAGAGCGGGAGCATGCCTCCACCCAACTCCTTGA AAATGAAGCAGCTTATGAGGATCTGATCGCTGCGCTCGCCGCTGCAAACCGGCGCCGTCCACCGGCATTGGTTGTGTCTC CGGGGCAATCGGGCACAGCGATCCGCCGCGCCATCCTGATGCAGACAACGCTGCCGGAACTGAGCGCGCGGGCCGAGCGG ATTTCCGGCGAGATTGCCGCCCTCAACAAGCTGGAAGATCAGATCCGCACCGAGCAGGCCCGGCTCGATGCGGCTGAAGC GACCATCGCCTTGAAAAAAGAGGAAATTGAGCGCTTGGCCGCGACGAAGCGCAGCCAGTATGAGGGGCTGTCTGGCGACG TATCCACTTTGAAGGATCGCGCCCAGAAACTGGGCAAAGAGGCCGATACCCTGCGCGAACTTCTCTCTGCGCTGGAATCC AGCGCGCCCGCCTCCCCCGGCACAAAGCCGAAGCAGCGCCCGCAGCTGGCATCCTTGAAGCCGGCGCCCAAGAGCGCGGT TCCGGGCAAGTCCGTACCGGCAAAAACAGCGTCCAAACCGCTTGGCAAGTCGGCGCTGGGCGGTCTCGTTCAGCCTGTAT CCGGCGATGTGCGCAACCGTTTCGGGGACAAGCTTTCTGGTGGCAGCATTGCAGAATGGGTCAGTTTTGAAACCCGCGCT GAAGCTCAGGTCATCGCCCCGGTGGGCGGCACGGTCGAATATGCCCGGCCCTTCCGCAGCTACGGGTCCATGCTGATTCT GCGTACAAGCGACGGCTATCATGTTATTCTGACAGGTATGAGCCGGATTTACGTATCCGAAGGCCAGGCCGTGACGGCGG GTGAACCTGTTGGGCTTATGCCCGACCGCGCTGACCCGCCCCCCGAACTCACGCTGGAATTAAGGCTTGGCGACAGGGTC CTTAATCCTGCAGAGTGGTTGTCGCGTGGCGGCTGA
Upstream 100 bases:
>100_bases TGTTTTTGTCTCTGATTGACCGGGAATTGTCGTTGCTTGGCGCGGCATTGACCGCCCTTGGTGGCCGAATGTCTCATGAT TAACGCCAAAGTGACGCCTC
Downstream 100 bases:
>100_bases TCCGCCGTGTGAGGATGAAGATGGAGTGGAATATGCGTTCATTGCTGACCGGAACAGCCCTGGGTGGAGTTCTGGGGGCG CTGACGGTGGGCTTCGCCGC
Product: M23 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MAHFPRMRFFRPLVLSCLALALTAAGPDTYTRQDLEALEKEKRAAEQKLEQLQSTGKSAELDLQSLDQDLLAAAAEALRR EEQAVSAEKALIDLSVEREHASTQLLENEAAYEDLIAALAAANRRRPPALVVSPGQSGTAIRRAILMQTTLPELSARAER ISGEIAALNKLEDQIRTEQARLDAAEATIALKKEEIERLAATKRSQYEGLSGDVSTLKDRAQKLGKEADTLRELLSALES SAPASPGTKPKQRPQLASLKPAPKSAVPGKSVPAKTASKPLGKSALGGLVQPVSGDVRNRFGDKLSGGSIAEWVSFETRA EAQVIAPVGGTVEYARPFRSYGSMLILRTSDGYHVILTGMSRIYVSEGQAVTAGEPVGLMPDRADPPPELTLELRLGDRV LNPAEWLSRGG
Sequences:
>Translated_411_residues MAHFPRMRFFRPLVLSCLALALTAAGPDTYTRQDLEALEKEKRAAEQKLEQLQSTGKSAELDLQSLDQDLLAAAAEALRR EEQAVSAEKALIDLSVEREHASTQLLENEAAYEDLIAALAAANRRRPPALVVSPGQSGTAIRRAILMQTTLPELSARAER ISGEIAALNKLEDQIRTEQARLDAAEATIALKKEEIERLAATKRSQYEGLSGDVSTLKDRAQKLGKEADTLRELLSALES SAPASPGTKPKQRPQLASLKPAPKSAVPGKSVPAKTASKPLGKSALGGLVQPVSGDVRNRFGDKLSGGSIAEWVSFETRA EAQVIAPVGGTVEYARPFRSYGSMLILRTSDGYHVILTGMSRIYVSEGQAVTAGEPVGLMPDRADPPPELTLELRLGDRV LNPAEWLSRGG >Mature_410_residues AHFPRMRFFRPLVLSCLALALTAAGPDTYTRQDLEALEKEKRAAEQKLEQLQSTGKSAELDLQSLDQDLLAAAAEALRRE EQAVSAEKALIDLSVEREHASTQLLENEAAYEDLIAALAAANRRRPPALVVSPGQSGTAIRRAILMQTTLPELSARAERI SGEIAALNKLEDQIRTEQARLDAAEATIALKKEEIERLAATKRSQYEGLSGDVSTLKDRAQKLGKEADTLRELLSALESS APASPGTKPKQRPQLASLKPAPKSAVPGKSVPAKTASKPLGKSALGGLVQPVSGDVRNRFGDKLSGGSIAEWVSFETRAE AQVIAPVGGTVEYARPFRSYGSMLILRTSDGYHVILTGMSRIYVSEGQAVTAGEPVGLMPDRADPPPELTLELRLGDRVL NPAEWLSRGG
Specific function: Unknown
COG id: COG4942
COG function: function code D; Membrane-bound metallopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M23B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR016047 - InterPro: IPR002886 [H]
Pfam domain/function: PF01551 Peptidase_M23 [H]
EC number: NA
Molecular weight: Translated: 44198; Mature: 44067
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHFPRMRFFRPLVLSCLALALTAAGPDTYTRQDLEALEKEKRAAEQKLEQLQSTGKSAE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LDLQSLDQDLLAAAAEALRREEQAVSAEKALIDLSVEREHASTQLLENEAAYEDLIAALA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHHHHHHHHHHHHHHHHHHHHHHH AANRRRPPALVVSPGQSGTAIRRAILMQTTLPELSARAERISGEIAALNKLEDQIRTEQA HHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RLDAAEATIALKKEEIERLAATKRSQYEGLSGDVSTLKDRAQKLGKEADTLRELLSALES HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH SAPASPGTKPKQRPQLASLKPAPKSAVPGKSVPAKTASKPLGKSALGGLVQPVSGDVRNR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCHHHHH FGDKLSGGSIAEWVSFETRAEAQVIAPVGGTVEYARPFRSYGSMLILRTSDGYHVILTGM CCCCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCEEEEECC SRIYVSEGQAVTAGEPVGLMPDRADPPPELTLELRLGDRVLNPAEWLSRGG HHEEEECCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCC >Mature Secondary Structure AHFPRMRFFRPLVLSCLALALTAAGPDTYTRQDLEALEKEKRAAEQKLEQLQSTGKSAE CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LDLQSLDQDLLAAAAEALRREEQAVSAEKALIDLSVEREHASTQLLENEAAYEDLIAALA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHHHHHHHHHHHHHHHHHHHHHHH AANRRRPPALVVSPGQSGTAIRRAILMQTTLPELSARAERISGEIAALNKLEDQIRTEQA HHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RLDAAEATIALKKEEIERLAATKRSQYEGLSGDVSTLKDRAQKLGKEADTLRELLSALES HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH SAPASPGTKPKQRPQLASLKPAPKSAVPGKSVPAKTASKPLGKSALGGLVQPVSGDVRNR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCHHHHH FGDKLSGGSIAEWVSFETRAEAQVIAPVGGTVEYARPFRSYGSMLILRTSDGYHVILTGM CCCCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCEEEEECC SRIYVSEGQAVTAGEPVGLMPDRADPPPELTLELRLGDRVLNPAEWLSRGG HHEEEECCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]