Click here to switch to the map view.

The map label for this gene is yibQ [C]

Identifier: 114799786

GI number: 114799786

Start: 3380183

End: 3381472

Strand: Reverse

Name: yibQ [C]

Synonym: HNE_3208

Alternate gene names: 114799786

Gene position: 3381472-3380183 (Counterclockwise)

Preceding gene: 114798612

Following gene: 114800548

Centisome position: 91.27

GC content: 62.25

Gene sequence:

>1290_bases
ATGGGTTACCGGCAGTCTGAGCCGTCGCCGTTGAAGACCGGTCTGATGCACGCTGGCATGAGCCTGGGTGTGTTTGGCAG
CCTCGCAATTGCGTTGGGCGCAGGCATTCACGTCACAGCCGATCCTTCGGAAGCTGGCCCTCGTCAGACAATCGCCCTGT
TCGGCACCGATGCCGGTGAAAGCGATAGCGCGTTCGCGGCCCTCCCGTCTGCTGACTATGAAGAAGATTATGTCGCCGCC
GACGACGCGGTTTCGGGCGCGGTGGATATTGCCTATACCGAGCTTGATGGCGAAGGCATGCGCATCGATATTACGGGCGG
GCAGGGCGGACCTGCTGTAGCGCCTGCAGTGGGCATCCGGATCAATGGCCGGCTCGTGCAACCTGGGCAGTCTTTCGGTG
AAGTTGCCTCCGGTACGCCCGCAGGCGCTGGCGAAGCTGGCGCGCAGCTGACGCTCAATACCGCAGAACAGGTTTCCAAA
CCGGCCAGCAAGGCTCCGGCAGACATCTATGCCCGCCCATTCTCCAATTCGGGCGGTCAGCCGGTTGTCTCTCTTGTGAT
CGGTGGCCTCGGCATCAATTCCACCCAGACGAAACTCGCCATTGATGCGCTGCCGGCGGATGTGACCCTTTCCTTTGCGC
CCGATGCCAAGCGCCTCGACTACTGGATCAAGACAGCGCGCGAAGATGGTCACGAAGTTCTGATCGAAGTGCCGATGGAG
GCCTTTGAGTATGGCCGCATGCGCATGCACCCCGACACGCTGATTGCCGGCGGCGACCAGAAGGCAAATCTGGCCAAGCT
CAACCAGGTGCTCAGCCGCGCCAGCGGGTATTACGGCGTCATCAACTATCAGGGCGCAAAGTTTGGCGCCGATGCCGGCT
CGATCGCCCCCATCTTTGATGTACTGGCCGAACGCGGTCTCGCCTTTGTGGATGATGGCAGCGTTCACAAGGCATTCTTC
GGTCAGGTGGCTGACACCAAAGGCCTCCGCTTCGCCCGCGCCGCAGGCCCGATCGACACCCGACAGTCCCCGCAGGACAT
TGCGGCCGAATTCATGGAACTCGAAACCATTGCGCGCCAGCATGGCGGCGCGATCGGGGCAGGGTTTGCGTTCCCCGTCA
CCATCGAAGCGGCCTCGCTCTGGATCGATACGCTGGAAGAGAAGGGCCTTGTGCTTGCGCCGGTCTCGTTTCTTGTGCCC
GACGCAGCCCCCGTTCCGGTGCCCATGGCCGAACGCCGCGAGCTTCGCACTGGTAGCCCAGACAAGGCTGGTCTAAAAAC
CGGCGGGTGA

Upstream 100 bases:

>100_bases
TCCTTTCTCATCGGTAAGTGTCTGTTTGCCTCCTGTTAACCCTGCCCGGCGATCCTGAACGCTGCTTTCCCGCAGCCAAT
GGATGTTACGAGGTCGATAC

Downstream 100 bases:

>100_bases
CCCAGCCAAAACTCGACCCTCAACTGTATCGCGCCAATGTTGGCCTCGCCATGTTCTCGAAGGCGGGGCATGTTTTCATT
GGCCGGCGTATCAACGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MGYRQSEPSPLKTGLMHAGMSLGVFGSLAIALGAGIHVTADPSEAGPRQTIALFGTDAGESDSAFAALPSADYEEDYVAA
DDAVSGAVDIAYTELDGEGMRIDITGGQGGPAVAPAVGIRINGRLVQPGQSFGEVASGTPAGAGEAGAQLTLNTAEQVSK
PASKAPADIYARPFSNSGGQPVVSLVIGGLGINSTQTKLAIDALPADVTLSFAPDAKRLDYWIKTAREDGHEVLIEVPME
AFEYGRMRMHPDTLIAGGDQKANLAKLNQVLSRASGYYGVINYQGAKFGADAGSIAPIFDVLAERGLAFVDDGSVHKAFF
GQVADTKGLRFARAAGPIDTRQSPQDIAAEFMELETIARQHGGAIGAGFAFPVTIEAASLWIDTLEEKGLVLAPVSFLVP
DAAPVPVPMAERRELRTGSPDKAGLKTGG

Sequences:

>Translated_429_residues
MGYRQSEPSPLKTGLMHAGMSLGVFGSLAIALGAGIHVTADPSEAGPRQTIALFGTDAGESDSAFAALPSADYEEDYVAA
DDAVSGAVDIAYTELDGEGMRIDITGGQGGPAVAPAVGIRINGRLVQPGQSFGEVASGTPAGAGEAGAQLTLNTAEQVSK
PASKAPADIYARPFSNSGGQPVVSLVIGGLGINSTQTKLAIDALPADVTLSFAPDAKRLDYWIKTAREDGHEVLIEVPME
AFEYGRMRMHPDTLIAGGDQKANLAKLNQVLSRASGYYGVINYQGAKFGADAGSIAPIFDVLAERGLAFVDDGSVHKAFF
GQVADTKGLRFARAAGPIDTRQSPQDIAAEFMELETIARQHGGAIGAGFAFPVTIEAASLWIDTLEEKGLVLAPVSFLVP
DAAPVPVPMAERRELRTGSPDKAGLKTGG
>Mature_428_residues
GYRQSEPSPLKTGLMHAGMSLGVFGSLAIALGAGIHVTADPSEAGPRQTIALFGTDAGESDSAFAALPSADYEEDYVAAD
DAVSGAVDIAYTELDGEGMRIDITGGQGGPAVAPAVGIRINGRLVQPGQSFGEVASGTPAGAGEAGAQLTLNTAEQVSKP
ASKAPADIYARPFSNSGGQPVVSLVIGGLGINSTQTKLAIDALPADVTLSFAPDAKRLDYWIKTAREDGHEVLIEVPMEA
FEYGRMRMHPDTLIAGGDQKANLAKLNQVLSRASGYYGVINYQGAKFGADAGSIAPIFDVLAERGLAFVDDGSVHKAFFG
QVADTKGLRFARAAGPIDTRQSPQDIAAEFMELETIARQHGGAIGAGFAFPVTIEAASLWIDTLEEKGLVLAPVSFLVPD
AAPVPVPMAERRELRTGSPDKAGLKTGG

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44339; Mature: 44208

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYRQSEPSPLKTGLMHAGMSLGVFGSLAIALGAGIHVTADPSEAGPRQTIALFGTDAGE
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCC
SDSAFAALPSADYEEDYVAADDAVSGAVDIAYTELDGEGMRIDITGGQGGPAVAPAVGIR
CCCCEEECCCCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEE
INGRLVQPGQSFGEVASGTPAGAGEAGAQLTLNTAEQVSKPASKAPADIYARPFSNSGGQ
ECCEEECCCCHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCEEECCCCCCCCC
PVVSLVIGGLGINSTQTKLAIDALPADVTLSFAPDAKRLDYWIKTAREDGHEVLIEVPME
CEEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
AFEYGRMRMHPDTLIAGGDQKANLAKLNQVLSRASGYYGVINYQGAKFGADAGSIAPIFD
HHHCCCEEECCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCHHHHHH
VLAERGLAFVDDGSVHKAFFGQVADTKGLRFARAAGPIDTRQSPQDIAAEFMELETIARQ
HHHHCCCEEEECCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
HGGAIGAGFAFPVTIEAASLWIDTLEEKGLVLAPVSFLVPDAAPVPVPMAERRELRTGSP
CCCCEECCEEEEEEEEHHHHHHHHHHCCCEEEECHHHHCCCCCCCCCCHHHHHHHCCCCC
DKAGLKTGG
CCCCCCCCC
>Mature Secondary Structure 
GYRQSEPSPLKTGLMHAGMSLGVFGSLAIALGAGIHVTADPSEAGPRQTIALFGTDAGE
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCC
SDSAFAALPSADYEEDYVAADDAVSGAVDIAYTELDGEGMRIDITGGQGGPAVAPAVGIR
CCCCEEECCCCCCCCCEEECCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEE
INGRLVQPGQSFGEVASGTPAGAGEAGAQLTLNTAEQVSKPASKAPADIYARPFSNSGGQ
ECCEEECCCCHHHHHHCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCEEECCCCCCCCC
PVVSLVIGGLGINSTQTKLAIDALPADVTLSFAPDAKRLDYWIKTAREDGHEVLIEVPME
CEEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
AFEYGRMRMHPDTLIAGGDQKANLAKLNQVLSRASGYYGVINYQGAKFGADAGSIAPIFD
HHHCCCEEECCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCEECCCCCCHHHHHH
VLAERGLAFVDDGSVHKAFFGQVADTKGLRFARAAGPIDTRQSPQDIAAEFMELETIARQ
HHHHCCCEEEECCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
HGGAIGAGFAFPVTIEAASLWIDTLEEKGLVLAPVSFLVPDAAPVPVPMAERRELRTGSP
CCCCEECCEEEEEEEEHHHHHHHHHHCCCEEEECHHHHCCCCCCCCCCHHHHHHHCCCCC
DKAGLKTGG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA