Click here to switch to the map view.

The map label for this gene is ybaP [C]

Identifier: 114797391

GI number: 114797391

Start: 217294

End: 218400

Strand: Direct

Name: ybaP [C]

Synonym: HNE_0225

Alternate gene names: 114797391

Gene position: 217294-218400 (Clockwise)

Preceding gene: 114798541

Following gene: 114797706

Centisome position: 5.86

GC content: 64.05

Gene sequence:

>1107_bases
ATGCCGGGCATAGACGGGCTGGGGCGGCGCTCTCTATGGTGTCTTCAGCAATTGCATGACCTGCCCAGAAAGGCTCCGCT
GACGATGAAGCTGCCCTTTGCCGATACTCTCCTGGCCAGCTGCGCCCTGATTTTTCTGGTGGGGTGCCAGCCGTCAAACA
TTGATGAGGCGCCCGCTGAGGCTAGCCCGGCTGTGGCAGGGGAGGCCTGCGATGCTGCGCGGCGGGCAGAGATGCGCACC
GTTCGGCCGGGGCTTGAGGCAGCGGCGCTGGAAGCTGCGCGCGCCAGCCGTGGCGACGGGGCGCCCGCGCTCTGGACGCT
GCGCGATGACGATACGACCATCAATTTTCTGGGAACGGTCCACCTTCTGCGCCCGGAACTTGAGTGGCAGACGCCAGAGA
TCGAGGCGGCAATCGCCGGCGCGGACACTGTGGTTTTCGAGGCAGATACAACGAGCCCTGAAGCCCAGCGCGAGTTGATG
AAGTTCTACACGACCCAGGGGTTTTTTACCGATGGGACGCAGCTGACGAGCCTCCTCTCGGACGCTGAGACGGCGGAACT
TGAAGGGGCGCTTGAAAGTGTGGGGCTTCCCATCGAGGCGTTACTGCCGCACCGGCCGTGGATGGCCGCGGTCAACATCT
CCGTGAAGCAGATGCTGGATGAGGGGTTTGATCCCGAAGCCGGCGTGGAGCAGGTGATTGAGCGCGCTGCCGTGGCCCAG
GGCGCTGACTTTGCGTATCTGGAAACGGTCCAGCAGCAGCTGGGCGGCTTGGCCGGCCTCAGCCATTGCGAGCAGGTCGA
CTTCCTGATGGCGACGGTGGACGGCATCGGGGAAGGCGCAGGCGCGCTGGACCTGCTGGTGGATGAGTGGGCTGACGGGG
ACGTGACCGGCCTCGGCCTGATGATGGCCAATCCGGAAATGCTGGGGTCTCAGCCGATCTATGATGTGATGATGACCGAC
CGGAACGAACGCTGGGTGCCGCAGATTACTGCCATGCTGGATCAGCCGGGCACGATCCTGATTGCCGTTGGCGCGGGCCA
CCTGGCCGGTGAAGACAGTGTCATCAAGATGCTGCGCGACGAGGGTTATACGGTCGAGGGGCCGTAA

Upstream 100 bases:

>100_bases
CCTTTGCCTTCGGAGGGCAACGCTCTATCCAGCTGAGCTATGGGTGCCGCGCAGGGGGTATTTATGCGAAGCTTGAGGGC
GGCGCAACCGCGATTGCCTG

Downstream 100 bases:

>100_bases
GGCCGCTCAGTCTGCCGCGCGGCGCAGGGCGAGCAGCGCCTGAGCGAGAATGCCCTGGCTGGCGGCGCAGACGATCTGCC
CGCCGAGCGCTGGTGGTTCG

Product: GumN family protein

Products: NA

Alternate protein names: GumN Protein; Gumn Family Protein; GumN-Family Protein; SLA2 Protein; GumN Protein Superfamily; Secreted Protein

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MPGIDGLGRRSLWCLQQLHDLPRKAPLTMKLPFADTLLASCALIFLVGCQPSNIDEAPAEASPAVAGEACDAARRAEMRT
VRPGLEAAALEAARASRGDGAPALWTLRDDDTTINFLGTVHLLRPELEWQTPEIEAAIAGADTVVFEADTTSPEAQRELM
KFYTTQGFFTDGTQLTSLLSDAETAELEGALESVGLPIEALLPHRPWMAAVNISVKQMLDEGFDPEAGVEQVIERAAVAQ
GADFAYLETVQQQLGGLAGLSHCEQVDFLMATVDGIGEGAGALDLLVDEWADGDVTGLGLMMANPEMLGSQPIYDVMMTD
RNERWVPQITAMLDQPGTILIAVGAGHLAGEDSVIKMLRDEGYTVEGP

Sequences:

>Translated_368_residues
MPGIDGLGRRSLWCLQQLHDLPRKAPLTMKLPFADTLLASCALIFLVGCQPSNIDEAPAEASPAVAGEACDAARRAEMRT
VRPGLEAAALEAARASRGDGAPALWTLRDDDTTINFLGTVHLLRPELEWQTPEIEAAIAGADTVVFEADTTSPEAQRELM
KFYTTQGFFTDGTQLTSLLSDAETAELEGALESVGLPIEALLPHRPWMAAVNISVKQMLDEGFDPEAGVEQVIERAAVAQ
GADFAYLETVQQQLGGLAGLSHCEQVDFLMATVDGIGEGAGALDLLVDEWADGDVTGLGLMMANPEMLGSQPIYDVMMTD
RNERWVPQITAMLDQPGTILIAVGAGHLAGEDSVIKMLRDEGYTVEGP
>Mature_367_residues
PGIDGLGRRSLWCLQQLHDLPRKAPLTMKLPFADTLLASCALIFLVGCQPSNIDEAPAEASPAVAGEACDAARRAEMRTV
RPGLEAAALEAARASRGDGAPALWTLRDDDTTINFLGTVHLLRPELEWQTPEIEAAIAGADTVVFEADTTSPEAQRELMK
FYTTQGFFTDGTQLTSLLSDAETAELEGALESVGLPIEALLPHRPWMAAVNISVKQMLDEGFDPEAGVEQVIERAAVAQG
ADFAYLETVQQQLGGLAGLSHCEQVDFLMATVDGIGEGAGALDLLVDEWADGDVTGLGLMMANPEMLGSQPIYDVMMTDR
NERWVPQITAMLDQPGTILIAVGAGHLAGEDSVIKMLRDEGYTVEGP

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39331; Mature: 39200

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGIDGLGRRSLWCLQQLHDLPRKAPLTMKLPFADTLLASCALIFLVGCQPSNIDEAPAE
CCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ASPAVAGEACDAARRAEMRTVRPGLEAAALEAARASRGDGAPALWTLRDDDTTINFLGTV
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEE
HLLRPELEWQTPEIEAAIAGADTVVFEADTTSPEAQRELMKFYTTQGFFTDGTQLTSLLS
EEECCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
DAETAELEGALESVGLPIEALLPHRPWMAAVNISVKQMLDEGFDPEAGVEQVIERAAVAQ
CCHHHHHHHHHHHHCCCHHHHCCCCCCEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GADFAYLETVQQQLGGLAGLSHCEQVDFLMATVDGIGEGAGALDLLVDEWADGDVTGLGL
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEE
MMANPEMLGSQPIYDVMMTDRNERWVPQITAMLDQPGTILIAVGAGHLAGEDSVIKMLRD
EEECHHHHCCCCCEEHEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHH
EGYTVEGP
CCCEECCC
>Mature Secondary Structure 
PGIDGLGRRSLWCLQQLHDLPRKAPLTMKLPFADTLLASCALIFLVGCQPSNIDEAPAE
CCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ASPAVAGEACDAARRAEMRTVRPGLEAAALEAARASRGDGAPALWTLRDDDTTINFLGTV
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEE
HLLRPELEWQTPEIEAAIAGADTVVFEADTTSPEAQRELMKFYTTQGFFTDGTQLTSLLS
EEECCCCCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
DAETAELEGALESVGLPIEALLPHRPWMAAVNISVKQMLDEGFDPEAGVEQVIERAAVAQ
CCHHHHHHHHHHHHCCCHHHHCCCCCCEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHC
GADFAYLETVQQQLGGLAGLSHCEQVDFLMATVDGIGEGAGALDLLVDEWADGDVTGLGL
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEE
MMANPEMLGSQPIYDVMMTDRNERWVPQITAMLDQPGTILIAVGAGHLAGEDSVIKMLRD
EEECHHHHCCCCCEEHEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHH
EGYTVEGP
CCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA