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The map label for this gene is yngJ [H]

Identifier: 114798498

GI number: 114798498

Start: 3253828

End: 3254964

Strand: Reverse

Name: yngJ [H]

Synonym: HNE_3079

Alternate gene names: 114798498

Gene position: 3254964-3253828 (Counterclockwise)

Preceding gene: 114797732

Following gene: 114798391

Centisome position: 87.85

GC content: 60.42

Gene sequence:

>1137_bases
ATGAGCTTTGTACTGACTGAAGACCAGGAAATGCTGCGCGAAACCGCGACGGCGTTTGCCCGCGACGAGCTTTCCATCAC
CCATCTGCGTGCGCTGCGCGATGCCGGCGCAAATGGCAAAGATGCCAAGACCCGGCAGAAACTTGCTGAACTCGGCTTCT
TCGGTGTCATCATCCCAGATGAGCCGGGCGCCGAAACATTTGGCCTTACCGGCCTTGGCCAGATCCTTGAAGCGCAGGGC
GCCACTCTGGCGGCAACGCCGCTTCTGCAGACCGCGCTGATCGCCGCCTCGGCACTTCAGCTTGGTGGAAGCCCGGCCCA
ACAGGCAGAGTGGCTGCCCAAAATTGCCGGTGGCGAGACCACCTTCGCCTTGGCGCTGGACGAGACCGCACATTTCGCGC
CTTACAATGTTTCCACCGAAGCCGAGCGCAACGGGCAGGGGTACACGATCAACGGCCTGAAGAAATATGTGCCCGATGCC
CATCATGCCGACATGCTGATCGTTGTGGCCCGTACTTTCGGTGAAAGCGGAGACCGTCACGGCCTCAGCCTTTTCCTCGT
CCCGCGGGACGCAAAAGGCGTGACGATCACCGAGTTGAAAACCGTGGACAGCCACGGCGCGGCTCATGTGACGCTTGAGA
ATGTGAACGTGGCTGAAAGCGCGCTCATCGGCCCGGCAGATCAGGGCGCAGATATTCTCGATCCTGTACTTGACCGGGCT
GCCATCGGCCTGGCGGCCGAAATGCTGGGCTCGGCGCAGGCCGCCTTCGATATGACGCTTGAGTATCTGAACAACCGCAA
ACAGTTTGGCCAACTCATCGGCTCGTTCCAGTCGATGCAGCACCGCGCGGCAAAGATGTTCATCGATCTGGAAATGACGC
GCTCCTGCGTCGCTTCAGCACTGGCTGCGGCGGATGATGGCAAGTCTGATCTTGCCGAGCTTGCAAGCCTTGCCAAGGCA
CTGGCCAGTGAGCTTGTCCATCTGGTGTCGAATGAGTGTGTCCAGATGCATGGCGGTATCGGCATGACAGATGTTGCCGA
TCCCGGCTTCTACATGAAGCGGGCGCGGGTGCAGGAGGCGCTTTACGGTTCGGCAAGCTGGCACCGGGACCGGTATGCCC
GCCTGAACGGTTTCTGA

Upstream 100 bases:

>100_bases
CATCGCCAAGCGTGTCCTGGGCCTCAAAGAGCACCAGTAAGGCCGGCTTCGCGAAACCTGCTGCAATCCCATACAAACTT
GAATTTAAGGTGCCAGAGTA

Downstream 100 bases:

>100_bases
TCCGCGCAAGCGCGCCCACAAAAAAGCCGCCGCTCCGGCAATCGGGGCGGCGGCTTTGTTTTGGCGTCCGGCTGGATCAG
GCTTTCTTCAGCGCTGCAGC

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSFVLTEDQEMLRETATAFARDELSITHLRALRDAGANGKDAKTRQKLAELGFFGVIIPDEPGAETFGLTGLGQILEAQG
ATLAATPLLQTALIAASALQLGGSPAQQAEWLPKIAGGETTFALALDETAHFAPYNVSTEAERNGQGYTINGLKKYVPDA
HHADMLIVVARTFGESGDRHGLSLFLVPRDAKGVTITELKTVDSHGAAHVTLENVNVAESALIGPADQGADILDPVLDRA
AIGLAAEMLGSAQAAFDMTLEYLNNRKQFGQLIGSFQSMQHRAAKMFIDLEMTRSCVASALAAADDGKSDLAELASLAKA
LASELVHLVSNECVQMHGGIGMTDVADPGFYMKRARVQEALYGSASWHRDRYARLNGF

Sequences:

>Translated_378_residues
MSFVLTEDQEMLRETATAFARDELSITHLRALRDAGANGKDAKTRQKLAELGFFGVIIPDEPGAETFGLTGLGQILEAQG
ATLAATPLLQTALIAASALQLGGSPAQQAEWLPKIAGGETTFALALDETAHFAPYNVSTEAERNGQGYTINGLKKYVPDA
HHADMLIVVARTFGESGDRHGLSLFLVPRDAKGVTITELKTVDSHGAAHVTLENVNVAESALIGPADQGADILDPVLDRA
AIGLAAEMLGSAQAAFDMTLEYLNNRKQFGQLIGSFQSMQHRAAKMFIDLEMTRSCVASALAAADDGKSDLAELASLAKA
LASELVHLVSNECVQMHGGIGMTDVADPGFYMKRARVQEALYGSASWHRDRYARLNGF
>Mature_377_residues
SFVLTEDQEMLRETATAFARDELSITHLRALRDAGANGKDAKTRQKLAELGFFGVIIPDEPGAETFGLTGLGQILEAQGA
TLAATPLLQTALIAASALQLGGSPAQQAEWLPKIAGGETTFALALDETAHFAPYNVSTEAERNGQGYTINGLKKYVPDAH
HADMLIVVARTFGESGDRHGLSLFLVPRDAKGVTITELKTVDSHGAAHVTLENVNVAESALIGPADQGADILDPVLDRAA
IGLAAEMLGSAQAAFDMTLEYLNNRKQFGQLIGSFQSMQHRAAKMFIDLEMTRSCVASALAAADDGKSDLAELASLAKAL
ASELVHLVSNECVQMHGGIGMTDVADPGFYMKRARVQEALYGSASWHRDRYARLNGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=380, Percent_Identity=28.4210526315789, Blast_Score=131, Evalue=8e-31,
Organism=Homo sapiens, GI4501857, Length=370, Percent_Identity=27.2972972972973, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=27.4666666666667, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI226958414, Length=349, Percent_Identity=27.7936962750716, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI76496475, Length=323, Percent_Identity=28.4829721362229, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI4557235, Length=323, Percent_Identity=28.4829721362229, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI4557233, Length=377, Percent_Identity=26.2599469496021, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI7656849, Length=372, Percent_Identity=28.494623655914, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI21361497, Length=314, Percent_Identity=26.1146496815287, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI4557231, Length=386, Percent_Identity=26.4248704663212, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI187960098, Length=386, Percent_Identity=26.4248704663212, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI7669494, Length=353, Percent_Identity=24.0793201133144, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4503943, Length=353, Percent_Identity=24.0793201133144, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI87081958, Length=366, Percent_Identity=25.9562841530055, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1786223, Length=305, Percent_Identity=25.2459016393443, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=333, Percent_Identity=28.5285285285285, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI17538396, Length=377, Percent_Identity=27.5862068965517, Blast_Score=124, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI17506239, Length=379, Percent_Identity=25.3298153034301, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI71990804, Length=281, Percent_Identity=30.2491103202847, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=353, Percent_Identity=27.7620396600567, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17534899, Length=386, Percent_Identity=26.1658031088083, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=385, Percent_Identity=24.4155844155844, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=330, Percent_Identity=26.3636363636364, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71982178, Length=281, Percent_Identity=29.1814946619217, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=178, Percent_Identity=28.0898876404494, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=371, Percent_Identity=23.989218328841, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=391, Percent_Identity=25.0639386189258, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17534353, Length=354, Percent_Identity=22.8813559322034, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=307, Percent_Identity=27.3615635179153, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17551932, Length=303, Percent_Identity=26.0726072607261, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=331, Percent_Identity=23.5649546827795, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24666513, Length=357, Percent_Identity=29.6918767507003, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI21355753, Length=382, Percent_Identity=30.3664921465969, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI21356377, Length=375, Percent_Identity=28, Blast_Score=125, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24646207, Length=371, Percent_Identity=28.5714285714286, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI281363737, Length=324, Percent_Identity=28.7037037037037, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24660351, Length=392, Percent_Identity=28.3163265306122, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI19920834, Length=305, Percent_Identity=25.2459016393443, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40270; Mature: 40139

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVLTEDQEMLRETATAFARDELSITHLRALRDAGANGKDAKTRQKLAELGFFGVIIPD
CCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECC
EPGAETFGLTGLGQILEAQGATLAATPLLQTALIAASALQLGGSPAQQAEWLPKIAGGET
CCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCE
TFALALDETAHFAPYNVSTEAERNGQGYTINGLKKYVPDAHHADMLIVVARTFGESGDRH
EEEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCCCCEEEEEEEHHCCCCCCC
GLSLFLVPRDAKGVTITELKTVDSHGAAHVTLENVNVAESALIGPADQGADILDPVLDRA
CEEEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHH
AIGLAAEMLGSAQAAFDMTLEYLNNRKQFGQLIGSFQSMQHRAAKMFIDLEMTRSCVASA
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAADDGKSDLAELASLAKALASELVHLVSNECVQMHGGIGMTDVADPGFYMKRARVQEA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
LYGSASWHRDRYARLNGF
HHCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SFVLTEDQEMLRETATAFARDELSITHLRALRDAGANGKDAKTRQKLAELGFFGVIIPD
CEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEECC
EPGAETFGLTGLGQILEAQGATLAATPLLQTALIAASALQLGGSPAQQAEWLPKIAGGET
CCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCE
TFALALDETAHFAPYNVSTEAERNGQGYTINGLKKYVPDAHHADMLIVVARTFGESGDRH
EEEEEECCCCCCCCCCCCCCCCCCCCCEEECCHHHHCCCCCCCCEEEEEEEHHCCCCCCC
GLSLFLVPRDAKGVTITELKTVDSHGAAHVTLENVNVAESALIGPADQGADILDPVLDRA
CEEEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHH
AIGLAAEMLGSAQAAFDMTLEYLNNRKQFGQLIGSFQSMQHRAAKMFIDLEMTRSCVASA
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAADDGKSDLAELASLAKALASELVHLVSNECVQMHGGIGMTDVADPGFYMKRARVQEA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
LYGSASWHRDRYARLNGF
HHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]