Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is hemK [H]
Identifier: 114798227
GI number: 114798227
Start: 629469
End: 630326
Strand: Direct
Name: hemK [H]
Synonym: HNE_0629
Alternate gene names: 114798227
Gene position: 629469-630326 (Clockwise)
Preceding gene: 114799445
Following gene: 114797461
Centisome position: 16.99
GC content: 67.13
Gene sequence:
>858_bases GTGACGCCGCCCACCTATGATGATCTGATCCGGCATGCGGCGCGCCGTTTCAAGGACGCCGGTCTTTCGGAGGCGTATCA GAATGCCGTGCTGCTGATGGTTCATGCGTTCGGCGACACGCGTGCGGTGCTGATCTCGGCGGGCAATGCGCCTGTGCCAA AGGCTGTGGAAGACCTCTATCTCGCTGCCGTCGAGCGCCGCGCCGCGCGTGAGCCGATCCAGCACATCCTCGGCGTGACG CAATTCTACGGCCTCGACATCCGCACAGACGCGCGCGCGCTGATCCCGCGCATCGACAGCGAGTGCGTGGTCGAGGCGGC GCTGGACCGGATGCCGAAGAACACCCCGCTCGTCCTTGCGGATCTGGGCACGGGTTCGGGCTGCCTCCTCGCCGCGCTCC TGTCCCAGCGCCCGCTCGCCCGCGGGGAAGGGGTGGAGGCCAGCGCCGAGGCGGCGAGCCTCGCCCGCGAGAATCTCGAC GCCCTGAACCTTGCGGCGCGCGGCGCGGTCTTTGATGGCAGCTGGACCCAGTGGCAGGGCTGGGAAAACGCAGACCTCAT AATCTCCAATCCACCCTACATTGCATCGGCCGAGATTGCGGTGCTGGAGCCTGAAGTGCGCGCGCATGACCCCCTGAGCG CGCTCGATGGCGGGGCGGACGGGCTGGACGCTTACCGCGAGATCATCGCGCTCGCTGCCGCCCGGATGAAACCCGGCGCC TGGCTGGTGTTCGAGATCGGGCACGACCAGAAAGCGGCTCTGGAGTGGTTAATGGCACAGACCGGCTTTGAGGCCATTGC CTCTGGTCAGGATCTGGGCGGCAATGACCGCTGGGTTGGCGCCCGCAGACCCTGTTGA
Upstream 100 bases:
>100_bases CCGGTGACGGGGCAGACGCAAATATCGGCGTATCCGTGTTGCGTGATTTCACACTGGTGATCGATTTCGCAGGAAACCGT GTGTGGCTGGAACCGCGCGC
Downstream 100 bases:
>100_bases GCCCGCTTACATTTTCTCTTGGCGGGCCGGTCGATCCACGTTACACAAGAGGCCGGTGAGGGGCCGCCCGCAATTTGCGC GGGTGCAGATGCAAGCTCCC
Product: HemK family methyltransferase
Products: NA
Alternate protein names: M.XfaHemK2P [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTPPTYDDLIRHAARRFKDAGLSEAYQNAVLLMVHAFGDTRAVLISAGNAPVPKAVEDLYLAAVERRAAREPIQHILGVT QFYGLDIRTDARALIPRIDSECVVEAALDRMPKNTPLVLADLGTGSGCLLAALLSQRPLARGEGVEASAEAASLARENLD ALNLAARGAVFDGSWTQWQGWENADLIISNPPYIASAEIAVLEPEVRAHDPLSALDGGADGLDAYREIIALAAARMKPGA WLVFEIGHDQKAALEWLMAQTGFEAIASGQDLGGNDRWVGARRPC
Sequences:
>Translated_285_residues MTPPTYDDLIRHAARRFKDAGLSEAYQNAVLLMVHAFGDTRAVLISAGNAPVPKAVEDLYLAAVERRAAREPIQHILGVT QFYGLDIRTDARALIPRIDSECVVEAALDRMPKNTPLVLADLGTGSGCLLAALLSQRPLARGEGVEASAEAASLARENLD ALNLAARGAVFDGSWTQWQGWENADLIISNPPYIASAEIAVLEPEVRAHDPLSALDGGADGLDAYREIIALAAARMKPGA WLVFEIGHDQKAALEWLMAQTGFEAIASGQDLGGNDRWVGARRPC >Mature_284_residues TPPTYDDLIRHAARRFKDAGLSEAYQNAVLLMVHAFGDTRAVLISAGNAPVPKAVEDLYLAAVERRAAREPIQHILGVTQ FYGLDIRTDARALIPRIDSECVVEAALDRMPKNTPLVLADLGTGSGCLLAALLSQRPLARGEGVEASAEAASLARENLDA LNLAARGAVFDGSWTQWQGWENADLIISNPPYIASAEIAVLEPEVRAHDPLSALDGGADGLDAYREIIALAAARMKPGAW LVFEIGHDQKAALEWLMAQTGFEAIASGQDLGGNDRWVGARRPC
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=295, Percent_Identity=29.4915254237288, Blast_Score=109, Evalue=2e-24, Organism=Escherichia coli, GI1787463, Length=252, Percent_Identity=31.3492063492063, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI87082085, Length=199, Percent_Identity=27.6381909547739, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI24582226, Length=225, Percent_Identity=32.4444444444444, Blast_Score=117, Evalue=8e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 30557; Mature: 30426
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPTYDDLIRHAARRFKDAGLSEAYQNAVLLMVHAFGDTRAVLISAGNAPVPKAVEDLY CCCCCHHHHHHHHHHHHHHCCHHHHHHCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHH LAAVERRAAREPIQHILGVTQFYGLDIRTDARALIPRIDSECVVEAALDRMPKNTPLVLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE DLGTGSGCLLAALLSQRPLARGEGVEASAEAASLARENLDALNLAARGAVFDGSWTQWQG ECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCEECCCCCCCCC WENADLIISNPPYIASAEIAVLEPEVRAHDPLSALDGGADGLDAYREIIALAAARMKPGA CCCCCEEECCCCCEECCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCE WLVFEIGHDQKAALEWLMAQTGFEAIASGQDLGGNDRWVGARRPC EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TPPTYDDLIRHAARRFKDAGLSEAYQNAVLLMVHAFGDTRAVLISAGNAPVPKAVEDLY CCCCHHHHHHHHHHHHHHCCHHHHHHCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHH LAAVERRAAREPIQHILGVTQFYGLDIRTDARALIPRIDSECVVEAALDRMPKNTPLVLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE DLGTGSGCLLAALLSQRPLARGEGVEASAEAASLARENLDALNLAARGAVFDGSWTQWQG ECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCEECCCCCCCCC WENADLIISNPPYIASAEIAVLEPEVRAHDPLSALDGGADGLDAYREIIALAAARMKPGA CCCCCEEECCCCCEECCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCE WLVFEIGHDQKAALEWLMAQTGFEAIASGQDLGGNDRWVGARRPC EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]