| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is phhB
Identifier: 114798185
GI number: 114798185
Start: 3273319
End: 3273609
Strand: Reverse
Name: phhB
Synonym: HNE_3096
Alternate gene names: NA
Gene position: 3273609-3273319 (Counterclockwise)
Preceding gene: 114798517
Following gene: 114800499
Centisome position: 88.36
GC content: 59.45
Gene sequence:
>291_bases ATGTCAAAGATTGGTGCAGACGCAGCCGTCAAGGCCCTGAAGGGCTGGAAGATCGCCGAGGGCGAGCGCGACGCGATTGA GAAAGCCTATCGCTTTGCTGACTTCAAGACGGCGTTCGCGTTCATGTCGGCCACCGCTCTGAAGGCCGAGCAGATGGACC ACCATCCCGAATGGTTCAACGTCTATAACAAGGTCGACGTGACCCTCACCACGCATGACGCCGACGGCGTCACGCAGAAG GATCTCGAACTGGCCGGCTTCATGGACCAGCTCGCCGCAAAGCTTGGCTGA
Upstream 100 bases:
>100_bases CATCCGCGCCGGTGAAGGCTATCCGGGCATGCGCACAGCCATATCGGCCGACGGCCGTTGGGTATATTTCGTACTCGGCC AGGATGGAGAGGAATAAGAC
Downstream 100 bases:
>100_bases GCCTTACTTCCAGACCACCCGGTAGAGATCAAACCGCCGGTCTTTCAGGTTCTGCACGGCGCCCGATTGGCGCGCCGTCA GCAGGTCTGAAAGGGAAAGG
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSKIGADAAVKALKGWKIAEGERDAIEKAYRFADFKTAFAFMSATALKAEQMDHHPEWFNVYNKVDVTLTTHDADGVTQK DLELAGFMDQLAAKLG
Sequences:
>Translated_96_residues MSKIGADAAVKALKGWKIAEGERDAIEKAYRFADFKTAFAFMSATALKAEQMDHHPEWFNVYNKVDVTLTTHDADGVTQK DLELAGFMDQLAAKLG >Mature_95_residues SKIGADAAVKALKGWKIAEGERDAIEKAYRFADFKTAFAFMSATALKAEQMDHHPEWFNVYNKVDVTLTTHDADGVTQKD LELAGFMDQLAAKLG
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI4557831, Length=81, Percent_Identity=54.320987654321, Blast_Score=103, Evalue=3e-23, Organism=Homo sapiens, GI134133240, Length=81, Percent_Identity=55.5555555555556, Blast_Score=99, Evalue=5e-22, Organism=Caenorhabditis elegans, GI115533705, Length=80, Percent_Identity=58.75, Blast_Score=111, Evalue=8e-26, Organism=Drosophila melanogaster, GI45549100, Length=81, Percent_Identity=51.8518518518518, Blast_Score=97, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 10609; Mature: 10478
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIGADAAVKALKGWKIAEGERDAIEKAYRFADFKTAFAFMSATALKAEQMDHHPEWFN CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VYNKVDVTLTTHDADGVTQKDLELAGFMDQLAAKLG HHCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKIGADAAVKALKGWKIAEGERDAIEKAYRFADFKTAFAFMSATALKAEQMDHHPEWFN CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH VYNKVDVTLTTHDADGVTQKDLELAGFMDQLAAKLG HHCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA