| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ilvE [H]
Identifier: 114800499
GI number: 114800499
Start: 3268335
End: 3269219
Strand: Reverse
Name: ilvE [H]
Synonym: HNE_3091
Alternate gene names: 114800499
Gene position: 3269219-3268335 (Counterclockwise)
Preceding gene: 114798185
Following gene: 114800281
Centisome position: 88.24
GC content: 61.02
Gene sequence:
>885_bases ATGTCTGCCATCCCCTATGATGACCGCGACGGATACATCTGGATGGATGGCTCGTTCGTACCCTGGCGTGACACCAAAGT GCACGTTCTGACGCATGCATTGCACTACGCTTCCTCCGTTTTTGAAGGCGAGCGCGCCTATAGCGGCAAGATCTTCCGCT CGCTGGACCACTCCAAGCGGCTGCACAATTCGGCCGGTATCATGGGCTTCGACATTCCCTTCAGCGTGGAGGAAATCGAG CGGGCCAAGAAAGAGGCGCTGGAAAAATCCGGTCTCGAGAGCGCTTATGTGCGCGCCGTGGCCTGGCGCGGATCGGAAAT GATGGGCGTTTCGGCGCAGAACAACACCATCCATCTGGCAATCGCTGTCTGGCATTGGGGCGACTATTTTGCCGACAAGA TGAAGGGCATCCGCCTGACGCATGCCCAGTGGCGCCGCCCGGCGCCCGATACGGCGCCCTGCCATGCCAAGGCGGCGGGC CTCTATATGATCTGCACCCTCTCCAAGCATGCCGCGGAGAAGGCGGGCTATCAGGACGCGCTGATGCTGGACTATCGCGG CCAGGTGGCCGAGGCGACCGGCGCGAACATCTTCTTCGTGCGTGACGGCGTTCTGCATACGCCGACCCCGGACTGTTTCC TCAACGGTCTTACCCGCCAGACGACGATTGCGCTCGCCAAGGCGCGCCAGATCGAAGTGGTCGAACGGGCGATCTTCCCG GATGAGCTTTCAACGTTCAGCGAATGCTTCATCACGGGCTCTGCTGCGGAGCTGACGCCGGTCGCCGAGATCGGCGAGCA TCGCTACAAGCCTGGCCAGATCTCCGAAGCGCTGGTGAACGACTATTCCAACCTCTGTAACGGGAAGCTGGAGCTGGCGC TTTAG
Upstream 100 bases:
>100_bases AACAGGCGGGGGTCGAATGGGCGGTTCAGGTTGACGGATTGGGCCATAAGTCGGAAATGAACGCGAACCGCAACAAAAGT GCAAGCGAGGAGCGTAAGCA
Downstream 100 bases:
>100_bases GGCGTCAGTAGGGCGGACTGACAAACACTTTCAGTTCTTGTTTGTCTGGGTGGAGCGTGACAATCGCCTGATTGTTGTCG ACGCTGATCCCGAGGTTTCC
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSAIPYDDRDGYIWMDGSFVPWRDTKVHVLTHALHYASSVFEGERAYSGKIFRSLDHSKRLHNSAGIMGFDIPFSVEEIE RAKKEALEKSGLESAYVRAVAWRGSEMMGVSAQNNTIHLAIAVWHWGDYFADKMKGIRLTHAQWRRPAPDTAPCHAKAAG LYMICTLSKHAAEKAGYQDALMLDYRGQVAEATGANIFFVRDGVLHTPTPDCFLNGLTRQTTIALAKARQIEVVERAIFP DELSTFSECFITGSAAELTPVAEIGEHRYKPGQISEALVNDYSNLCNGKLELAL
Sequences:
>Translated_294_residues MSAIPYDDRDGYIWMDGSFVPWRDTKVHVLTHALHYASSVFEGERAYSGKIFRSLDHSKRLHNSAGIMGFDIPFSVEEIE RAKKEALEKSGLESAYVRAVAWRGSEMMGVSAQNNTIHLAIAVWHWGDYFADKMKGIRLTHAQWRRPAPDTAPCHAKAAG LYMICTLSKHAAEKAGYQDALMLDYRGQVAEATGANIFFVRDGVLHTPTPDCFLNGLTRQTTIALAKARQIEVVERAIFP DELSTFSECFITGSAAELTPVAEIGEHRYKPGQISEALVNDYSNLCNGKLELAL >Mature_293_residues SAIPYDDRDGYIWMDGSFVPWRDTKVHVLTHALHYASSVFEGERAYSGKIFRSLDHSKRLHNSAGIMGFDIPFSVEEIER AKKEALEKSGLESAYVRAVAWRGSEMMGVSAQNNTIHLAIAVWHWGDYFADKMKGIRLTHAQWRRPAPDTAPCHAKAAGL YMICTLSKHAAEKAGYQDALMLDYRGQVAEATGANIFFVRDGVLHTPTPDCFLNGLTRQTTIALAKARQIEVVERAIFPD ELSTFSECFITGSAAELTPVAEIGEHRYKPGQISEALVNDYSNLCNGKLELAL
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI48994963, Length=293, Percent_Identity=38.2252559726962, Blast_Score=192, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6322002, Length=296, Percent_Identity=25, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 32699; Mature: 32568
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIPYDDRDGYIWMDGSFVPWRDTKVHVLTHALHYASSVFEGERAYSGKIFRSLDHSKR CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHH LHNSAGIMGFDIPFSVEEIERAKKEALEKSGLESAYVRAVAWRGSEMMGVSAQNNTIHLA HHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCEEEEECCCCEEEEE IAVWHWGDYFADKMKGIRLTHAQWRRPAPDTAPCHAKAAGLYMICTLSKHAAEKAGYQDA EEEEECCHHHHHHHCCEEEEHHHCCCCCCCCCCCCHHCCCEEEEEECCHHHHHHCCCCCE LMLDYRGQVAEATGANIFFVRDGVLHTPTPDCFLNGLTRQTTIALAKARQIEVVERAIFP EEEECCCCEECCCCCEEEEEECCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCH DELSTFSECFITGSAAELTPVAEIGEHRYKPGQISEALVNDYSNLCNGKLELAL HHHHHHHHHEECCCCHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEC >Mature Secondary Structure SAIPYDDRDGYIWMDGSFVPWRDTKVHVLTHALHYASSVFEGERAYSGKIFRSLDHSKR CCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHH LHNSAGIMGFDIPFSVEEIERAKKEALEKSGLESAYVRAVAWRGSEMMGVSAQNNTIHLA HHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCEEEEECCCCEEEEE IAVWHWGDYFADKMKGIRLTHAQWRRPAPDTAPCHAKAAGLYMICTLSKHAAEKAGYQDA EEEEECCHHHHHHHCCEEEEHHHCCCCCCCCCCCCHHCCCEEEEEECCHHHHHHCCCCCE LMLDYRGQVAEATGANIFFVRDGVLHTPTPDCFLNGLTRQTTIALAKARQIEVVERAIFP EEEECCCCEECCCCCEEEEEECCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCH DELSTFSECFITGSAAELTPVAEIGEHRYKPGQISEALVNDYSNLCNGKLELAL HHHHHHHHHEECCCCHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]