| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798517
Identifier: 114798517
GI number: 114798517
Start: 3273613
End: 3274206
Strand: Reverse
Name: 114798517
Synonym: HNE_3097
Alternate gene names: NA
Gene position: 3274206-3273613 (Counterclockwise)
Preceding gene: 114797545
Following gene: 114798185
Centisome position: 88.37
GC content: 64.31
Gene sequence:
>594_bases ATGCGGTGCGCTAGCTTCACGCTCGCCCTTCTGATGGGAATGCTGGCGGCCTGCTCGCAGGCTGAACCCGCCAATGTGCC CGTCGCTGGCCCGCCTTCGCCGCCCGAATCCCTCACCCGCCCGCCCCAGCCGCCCGAACCGGTGGAGCTGACCGAAGACG CGGAAAAGATGAAAGCCGCCATCCTGCGCGAAGCCGAACGCGGCGCCCTGCGCAGCCTCGGCCGCCTCGCCAGCCAGCAG GAAGGCTTCATCTCCAATATCGGAGGCCAGGATCATTACGAGTTCTGGGATCTGCTCCGCAGAACCGGCGTCGATCCCAA CCGCAAGATCCGCGACCTGTTTGAAGGCCCGCCGGGCAAACGCGAGATTGACGGCGAAACCTGGTTTGTCTGGCCCGACA TTGCCGCCAAGGACGCACGCGATCTGATCCCCGAGAAGCTGACTTTCGTAGAACGCCGCCGCTTGCGCGAACTGATCGGT GAAGATGGCATCGCCCGCATCCGCGCCGGTGAAGGCTATCCGGGCATGCGCACAGCCATATCGGCCGACGGCCGTTGGGT ATATTTCGTACTCGGCCAGGATGGAGAGGAATAA
Upstream 100 bases:
>100_bases CTCGGGATCAATCTGAAGCCGGCCCGCGAAATGGGCATGGCGACCATCAAGGTGACCAGCGAAGACCAATTGCTGGCCGA TCTGGAAGCCATCACCGGCT
Downstream 100 bases:
>100_bases GACATGTCAAAGATTGGTGCAGACGCAGCCGTCAAGGCCCTGAAGGGCTGGAAGATCGCCGAGGGCGAGCGCGACGCGAT TGAGAAAGCCTATCGCTTTG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRCASFTLALLMGMLAACSQAEPANVPVAGPPSPPESLTRPPQPPEPVELTEDAEKMKAAILREAERGALRSLGRLASQQ EGFISNIGGQDHYEFWDLLRRTGVDPNRKIRDLFEGPPGKREIDGETWFVWPDIAAKDARDLIPEKLTFVERRRLRELIG EDGIARIRAGEGYPGMRTAISADGRWVYFVLGQDGEE
Sequences:
>Translated_197_residues MRCASFTLALLMGMLAACSQAEPANVPVAGPPSPPESLTRPPQPPEPVELTEDAEKMKAAILREAERGALRSLGRLASQQ EGFISNIGGQDHYEFWDLLRRTGVDPNRKIRDLFEGPPGKREIDGETWFVWPDIAAKDARDLIPEKLTFVERRRLRELIG EDGIARIRAGEGYPGMRTAISADGRWVYFVLGQDGEE >Mature_197_residues MRCASFTLALLMGMLAACSQAEPANVPVAGPPSPPESLTRPPQPPEPVELTEDAEKMKAAILREAERGALRSLGRLASQQ EGFISNIGGQDHYEFWDLLRRTGVDPNRKIRDLFEGPPGKREIDGETWFVWPDIAAKDARDLIPEKLTFVERRRLRELIG EDGIARIRAGEGYPGMRTAISADGRWVYFVLGQDGEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21885; Mature: 21885
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCASFTLALLMGMLAACSQAEPANVPVAGPPSPPESLTRPPQPPEPVELTEDAEKMKAA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHH ILREAERGALRSLGRLASQQEGFISNIGGQDHYEFWDLLRRTGVDPNRKIRDLFEGPPGK HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCC REIDGETWFVWPDIAAKDARDLIPEKLTFVERRRLRELIGEDGIARIRAGEGYPGMRTAI CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHEE SADGRWVYFVLGQDGEE CCCCCEEEEEECCCCCC >Mature Secondary Structure MRCASFTLALLMGMLAACSQAEPANVPVAGPPSPPESLTRPPQPPEPVELTEDAEKMKAA CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHH ILREAERGALRSLGRLASQQEGFISNIGGQDHYEFWDLLRRTGVDPNRKIRDLFEGPPGK HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCC REIDGETWFVWPDIAAKDARDLIPEKLTFVERRRLRELIGEDGIARIRAGEGYPGMRTAI CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHEE SADGRWVYFVLGQDGEE CCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA