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The map label for this gene is yrbH [C]

Identifier: 114797510

GI number: 114797510

Start: 1033567

End: 1034595

Strand: Reverse

Name: yrbH [C]

Synonym: HNE_1024

Alternate gene names: 114797510

Gene position: 1034595-1033567 (Counterclockwise)

Preceding gene: 114799142

Following gene: 114799559

Centisome position: 27.92

GC content: 64.14

Gene sequence:

>1029_bases
ATGCCGCCTTCTAATTCTAGGACAAGGCACCAGCGCCAGCCTGGCGTGCGGAGTATCACTGTCTTGACCTCACAATCCGA
TCTCGACCTCGCCCGGAATGTCATCCGCACAGAGCGGAATGCGCTGGAAAAGCTGGAGCAGACGCTCGGCCCCTCTCTGG
AGGAGGCGGTCAGCACCATCCTGGCGACCGACCGGCATGTGATCGTCGCGGGCGTCGGCAAGTCAGGCCATATCGGCCAG
AAGATTGCCGCCAGCCTCGCCTCGACCGGTACGCCTTCATTCTTCCTGCACCCGACCGAAGCCAGCCATGGCGATCTCGG
CATGATCGTGCCGGGCTCGGTTGTGATTGCGATTTCCTATTCGGGCGAAAGCCGCGAGCTGATCGACCTGCTGCGCTACT
GCAAGAGCAATGCGATCCCGCTGATCGCGATGACGCGGGCGCGCGAATCGACCCTCGGGCGCTACGCTGATGTGCTGCTG
GAGCTGCCGACCGTTCCCGAAGCCTGCCCCAATGGGCTGGCGCCCACCTCATCGACCACCATGGCGCTGGCGCTCGGCGA
CGCGCTGACCATCGTGCTGATGGCGCGCCGGGGCTTTTCGACCGAAGATTTCGGCTTCCGCCATCCCGGCGGAAAGCTCG
GCCGGACATTGCAGACGGCGGGCGATTACATCCGCGACCACAAAGATCCCCTGCCGCTGGCCAGCGCCGGGGCGAGCTTT
GAGGAGCTGGTGATCGCCGTATCCGAAGGCCGCAAAGGCTGTGTCGGGATTATCGACGAAACGCGCAAGCTGATCGGCAT
GGTCACCGATGGCGACCTGCGCCGGGCGATTCTGGCGGGACGCACAAACGCCAGCGCGCGCGAAGTGATGACGCCGGGCC
CGCGCACGATCGATCCGGACGCCCGCATGATGAGCGTGATCAAGAGCTTCAGCGAAAACCGGATTTCGAACGCCTTCGTG
GTCGATGAGACCGGCGCGCCGGCCGGCCTCATCGACATGAAAGACCTTCTCGCAGAAGGCTACGTGTAG

Upstream 100 bases:

>100_bases
GTCATGGACTACACCCGCCGTCAGCTGCGCCGCCGCTGACGGCGCTGACGGGCTAACGGCCAGCTTGGGGCCCGGCCTGG
GCTCTGGCCGGCAGGGCTTG

Downstream 100 bases:

>100_bases
GCGCTTACTTCGTCAGCTCGAACAGCACGCTGACATTCGCCGTGACGCCAACTTCACCGCCCGCAACCGGGGTGGATTCC
ATCATGTCCGACGCCATTGC

Product: KpsF/GutQ family sugar isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MPPSNSRTRHQRQPGVRSITVLTSQSDLDLARNVIRTERNALEKLEQTLGPSLEEAVSTILATDRHVIVAGVGKSGHIGQ
KIAASLASTGTPSFFLHPTEASHGDLGMIVPGSVVIAISYSGESRELIDLLRYCKSNAIPLIAMTRARESTLGRYADVLL
ELPTVPEACPNGLAPTSSTTMALALGDALTIVLMARRGFSTEDFGFRHPGGKLGRTLQTAGDYIRDHKDPLPLASAGASF
EELVIAVSEGRKGCVGIIDETRKLIGMVTDGDLRRAILAGRTNASAREVMTPGPRTIDPDARMMSVIKSFSENRISNAFV
VDETGAPAGLIDMKDLLAEGYV

Sequences:

>Translated_342_residues
MPPSNSRTRHQRQPGVRSITVLTSQSDLDLARNVIRTERNALEKLEQTLGPSLEEAVSTILATDRHVIVAGVGKSGHIGQ
KIAASLASTGTPSFFLHPTEASHGDLGMIVPGSVVIAISYSGESRELIDLLRYCKSNAIPLIAMTRARESTLGRYADVLL
ELPTVPEACPNGLAPTSSTTMALALGDALTIVLMARRGFSTEDFGFRHPGGKLGRTLQTAGDYIRDHKDPLPLASAGASF
EELVIAVSEGRKGCVGIIDETRKLIGMVTDGDLRRAILAGRTNASAREVMTPGPRTIDPDARMMSVIKSFSENRISNAFV
VDETGAPAGLIDMKDLLAEGYV
>Mature_341_residues
PPSNSRTRHQRQPGVRSITVLTSQSDLDLARNVIRTERNALEKLEQTLGPSLEEAVSTILATDRHVIVAGVGKSGHIGQK
IAASLASTGTPSFFLHPTEASHGDLGMIVPGSVVIAISYSGESRELIDLLRYCKSNAIPLIAMTRARESTLGRYADVLLE
LPTVPEACPNGLAPTSSTTMALALGDALTIVLMARRGFSTEDFGFRHPGGKLGRTLQTAGDYIRDHKDPLPLASAGASFE
ELVIAVSEGRKGCVGIIDETRKLIGMVTDGDLRRAILAGRTNASAREVMTPGPRTIDPDARMMSVIKSFSENRISNAFVV
DETGAPAGLIDMKDLLAEGYV

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=313, Percent_Identity=42.1725239616613, Blast_Score=228, Evalue=6e-61,
Organism=Escherichia coli, GI87082151, Length=320, Percent_Identity=39.0625, Blast_Score=217, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 36471; Mature: 36340

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSNSRTRHQRQPGVRSITVLTSQSDLDLARNVIRTERNALEKLEQTLGPSLEEAVSTI
CCCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LATDRHVIVAGVGKSGHIGQKIAASLASTGTPSFFLHPTEASHGDLGMIVPGSVVIAISY
HHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCEEEEEEEE
SGESRELIDLLRYCKSNAIPLIAMTRARESTLGRYADVLLELPTVPEACPNGLAPTSSTT
CCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
MALALGDALTIVLMARRGFSTEDFGFRHPGGKLGRTLQTAGDYIRDHKDPLPLASAGASF
EEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCH
EELVIAVSEGRKGCVGIIDETRKLIGMVTDGDLRRAILAGRTNASAREVMTPGPRTIDPD
HHHEEECCCCCCCEEHHHHHHHHHHEECCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCH
ARMMSVIKSFSENRISNAFVVDETGAPAGLIDMKDLLAEGYV
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
PPSNSRTRHQRQPGVRSITVLTSQSDLDLARNVIRTERNALEKLEQTLGPSLEEAVSTI
CCCCCCCHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LATDRHVIVAGVGKSGHIGQKIAASLASTGTPSFFLHPTEASHGDLGMIVPGSVVIAISY
HHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCEEEEEEEE
SGESRELIDLLRYCKSNAIPLIAMTRARESTLGRYADVLLELPTVPEACPNGLAPTSSTT
CCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE
MALALGDALTIVLMARRGFSTEDFGFRHPGGKLGRTLQTAGDYIRDHKDPLPLASAGASF
EEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCH
EELVIAVSEGRKGCVGIIDETRKLIGMVTDGDLRRAILAGRTNASAREVMTPGPRTIDPD
HHHEEECCCCCCCEEHHHHHHHHHHEECCCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCH
ARMMSVIKSFSENRISNAFVVDETGAPAGLIDMKDLLAEGYV
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]