Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is mviN [H]
Identifier: 114797264
GI number: 114797264
Start: 513272
End: 514828
Strand: Direct
Name: mviN [H]
Synonym: HNE_0519
Alternate gene names: 114797264
Gene position: 513272-514828 (Clockwise)
Preceding gene: 114797974
Following gene: 114800520
Centisome position: 13.85
GC content: 66.99
Gene sequence:
>1557_bases ATGAGCCTCGCCCGCAACACTGCCGTTCAGGCCTCGCTGACCCTGGCGAGCCGCATCCTTGGCCTCGCGCGGGATGTGAT CCTTGCCGCGAAGATCGGGGCAGGGCCCGTGGGCGACGCCTGGGCGACCGCCCAGCAATTCCCAAACCTCTTCCGGCGCA TCTTTGCCGAGGGCGCCTTCGCTTCGGCCTTCGTGCCTTCTTATGCGCGCACGCTGGAAGCCGAAGGCCCCGAAGCGGCC CAGCAGGTGGCGCAGGACGCGTTGCGGGTCCTCTTTGCGATGACCGCCGCCCTCACCATCCTCGCCCAGATATTCATGCC CTGGGTGCTCCTGCTGATCCATGGCGGCCAGGCGGACGATCCGGAGCATTATAATCTCGCCGTGCTGCTCACGCGCATCA CCATGCCCTACCTCACCTTCATGGCCATCGGCGCGCTGCTCTCGGGCGTGCTGAACTCGGCCGAGCGGTTCATCCTCTCA GCCGGCGCGCCAACGGTCCTCAATCTCTGCCTCATCCCGGCGGGCCTGCTTGGCACCACGCCGGTCATCACCACCCAGTA TGCGGCGATTGCCTTCCTCATTGCCGGCTTCCTTCAGGCCGCGCTCCTCTGGTGGGGCGTCAGCCGCCAGAAAGTCCGCC TCTCGCTGCTGGGCTGGCCGCGCCTTACCCCGGCCGTGAAGAAGGTGCTGCTGCTGGCTGTGCCCGGCACGATTGCCGCC TCGGGCACCCAGATCAACATCATCGTCAGCCAGTCGCTCGCAAGTTTCGAGGTCAGCGCCAAAAGCTGGCTCTATGCGGC AGACCGGCTTTACCAGCTTCCCCTCGGCCTTGTCGGCGTCGCGGTGGGCGTCGCCATCCTCCCGCGCCTCAGCCGCGCGG CGCGGGCAGGGGACGGGGCAGCGGGCAGCCGTACGATGGATGAAGGCCTCGGCCTTGCCATGGCGCTGACCCTTCCGGCG GCCGCCTCCCTGATGGTTGCGCCAGTCTTTCTGATCGACGCCTTTTTCGTGCGCGGCGCCTTCCTGCCATCCGATGCTGT GGCCGCGGGCGCAGCCCTCTTTCACTTTGCCTGGGGCGTACCCGCCTTTGTGCTCATCAAGGTTCTGGCCCCGCCTTTCT TCGCGCGGGAAGACACCAAAACGCCGATGCGCTTTGCGCTCGTCTCGGTGGTCATCAATACGCTGCTCGGCGCGGGGCTG TTCTTCTGGCTCAAGCAATCGGGCCAGATGGGCTTTACTGGCCTCGCCATCGCCACCAGCACAGCCTCCTGGGTCAACGC GCTGCTGCTGGCGGCCACGCTGGCCCGCCGCGGCTGGTACACGCCGGGCCCGCGCGCTATTTCAGGCTTCGCCCGCGCTT TCCTGGCCACGTTGATCCTCTCTGTGGCCATCTGGGGCATGCTGTGGCAACTGCCCGCCATACAAGGCGCGCTGAGCGGC TCGAAGGAGCTGGCTGCCGCCGTCATCGTGCTGGCCGGGGGCTTTATCTATACCTTTGCTGCCTTCCTGACCGGCGCCGT CCGCCTCAGCGACATCCGGCAGGCTTTGCGGCGCTGA
Upstream 100 bases:
>100_bases TTTTGCGGGAAGAACCAGAAGGCCCGCACACTCCGGCCCGCAAGCTCAAACGCTCGCGCGCCGTGGACAGCTTCTGAGAA TTGGTTCAACCGGGGTATCC
Downstream 100 bases:
>100_bases TCAAACGCGCTAAAGGCGCCCCACCATGACTGACACACCCCCCGCCTATACAGGCCCGCAACGCGTTTTCTCCGGCGTCC AGCCGACCGGCAATCTTCAC
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MSLARNTAVQASLTLASRILGLARDVILAAKIGAGPVGDAWATAQQFPNLFRRIFAEGAFASAFVPSYARTLEAEGPEAA QQVAQDALRVLFAMTAALTILAQIFMPWVLLLIHGGQADDPEHYNLAVLLTRITMPYLTFMAIGALLSGVLNSAERFILS AGAPTVLNLCLIPAGLLGTTPVITTQYAAIAFLIAGFLQAALLWWGVSRQKVRLSLLGWPRLTPAVKKVLLLAVPGTIAA SGTQINIIVSQSLASFEVSAKSWLYAADRLYQLPLGLVGVAVGVAILPRLSRAARAGDGAAGSRTMDEGLGLAMALTLPA AASLMVAPVFLIDAFFVRGAFLPSDAVAAGAALFHFAWGVPAFVLIKVLAPPFFAREDTKTPMRFALVSVVINTLLGAGL FFWLKQSGQMGFTGLAIATSTASWVNALLLAATLARRGWYTPGPRAISGFARAFLATLILSVAIWGMLWQLPAIQGALSG SKELAAAVIVLAGGFIYTFAAFLTGAVRLSDIRQALRR
Sequences:
>Translated_518_residues MSLARNTAVQASLTLASRILGLARDVILAAKIGAGPVGDAWATAQQFPNLFRRIFAEGAFASAFVPSYARTLEAEGPEAA QQVAQDALRVLFAMTAALTILAQIFMPWVLLLIHGGQADDPEHYNLAVLLTRITMPYLTFMAIGALLSGVLNSAERFILS AGAPTVLNLCLIPAGLLGTTPVITTQYAAIAFLIAGFLQAALLWWGVSRQKVRLSLLGWPRLTPAVKKVLLLAVPGTIAA SGTQINIIVSQSLASFEVSAKSWLYAADRLYQLPLGLVGVAVGVAILPRLSRAARAGDGAAGSRTMDEGLGLAMALTLPA AASLMVAPVFLIDAFFVRGAFLPSDAVAAGAALFHFAWGVPAFVLIKVLAPPFFAREDTKTPMRFALVSVVINTLLGAGL FFWLKQSGQMGFTGLAIATSTASWVNALLLAATLARRGWYTPGPRAISGFARAFLATLILSVAIWGMLWQLPAIQGALSG SKELAAAVIVLAGGFIYTFAAFLTGAVRLSDIRQALRR >Mature_517_residues SLARNTAVQASLTLASRILGLARDVILAAKIGAGPVGDAWATAQQFPNLFRRIFAEGAFASAFVPSYARTLEAEGPEAAQ QVAQDALRVLFAMTAALTILAQIFMPWVLLLIHGGQADDPEHYNLAVLLTRITMPYLTFMAIGALLSGVLNSAERFILSA GAPTVLNLCLIPAGLLGTTPVITTQYAAIAFLIAGFLQAALLWWGVSRQKVRLSLLGWPRLTPAVKKVLLLAVPGTIAAS GTQINIIVSQSLASFEVSAKSWLYAADRLYQLPLGLVGVAVGVAILPRLSRAARAGDGAAGSRTMDEGLGLAMALTLPAA ASLMVAPVFLIDAFFVRGAFLPSDAVAAGAALFHFAWGVPAFVLIKVLAPPFFAREDTKTPMRFALVSVVINTLLGAGLF FWLKQSGQMGFTGLAIATSTASWVNALLLAATLARRGWYTPGPRAISGFARAFLATLILSVAIWGMLWQLPAIQGALSGS KELAAAVIVLAGGFIYTFAAFLTGAVRLSDIRQALRR
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=480, Percent_Identity=33.5416666666667, Blast_Score=228, Evalue=7e-61,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 54559; Mature: 54428
Theoretical pI: Translated: 10.95; Mature: 10.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLARNTAVQASLTLASRILGLARDVILAAKIGAGPVGDAWATAQQFPNLFRRIFAEGAF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH ASAFVPSYARTLEAEGPEAAQQVAQDALRVLFAMTAALTILAQIFMPWVLLLIHGGQADD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PEHYNLAVLLTRITMPYLTFMAIGALLSGVLNSAERFILSAGAPTVLNLCLIPAGLLGTT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCC PVITTQYAAIAFLIAGFLQAALLWWGVSRQKVRLSLLGWPRLTPAVKKVLLLAVPGTIAA CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHHCCCCCEEE SGTQINIIVSQSLASFEVSAKSWLYAADRLYQLPLGLVGVAVGVAILPRLSRAARAGDGA CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGSRTMDEGLGLAMALTLPAAASLMVAPVFLIDAFFVRGAFLPSDAVAAGAALFHFAWGV CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH PAFVLIKVLAPPFFAREDTKTPMRFALVSVVINTLLGAGLFFWLKQSGQMGFTGLAIATS HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH TASWVNALLLAATLARRGWYTPGPRAISGFARAFLATLILSVAIWGMLWQLPAIQGALSG HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKELAAAVIVLAGGFIYTFAAFLTGAVRLSDIRQALRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLARNTAVQASLTLASRILGLARDVILAAKIGAGPVGDAWATAQQFPNLFRRIFAEGAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH ASAFVPSYARTLEAEGPEAAQQVAQDALRVLFAMTAALTILAQIFMPWVLLLIHGGQADD HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PEHYNLAVLLTRITMPYLTFMAIGALLSGVLNSAERFILSAGAPTVLNLCLIPAGLLGTT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCC PVITTQYAAIAFLIAGFLQAALLWWGVSRQKVRLSLLGWPRLTPAVKKVLLLAVPGTIAA CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCHHHHHHHHHCCCCCEEE SGTQINIIVSQSLASFEVSAKSWLYAADRLYQLPLGLVGVAVGVAILPRLSRAARAGDGA CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AGSRTMDEGLGLAMALTLPAAASLMVAPVFLIDAFFVRGAFLPSDAVAAGAALFHFAWGV CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH PAFVLIKVLAPPFFAREDTKTPMRFALVSVVINTLLGAGLFFWLKQSGQMGFTGLAIATS HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH TASWVNALLLAATLARRGWYTPGPRAISGFARAFLATLILSVAIWGMLWQLPAIQGALSG HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKELAAAVIVLAGGFIYTFAAFLTGAVRLSDIRQALRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA