Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is fyuA [H]

Identifier: 114797247

GI number: 114797247

Start: 2307522

End: 2309858

Strand: Direct

Name: fyuA [H]

Synonym: HNE_2210

Alternate gene names: 114797247

Gene position: 2307522-2309858 (Clockwise)

Preceding gene: 114797204

Following gene: 114798044

Centisome position: 62.28

GC content: 59.35

Gene sequence:

>2337_bases
ATGTCTGATATCAATAAACGCATTGCGTCCGGCGCCGGAAAATTCATCCGGACGACATGGCTTGGACATGCGTCTGCGCT
TGCCCTGCTTGGCGGTATGGCTCTTCCCGCAATCGCACAGGAAACCACCCCTCCCCCGGCCGCCCAGGAAGCGGATACCC
AGGAACCGGCTACGGATGAACTTGCGGTCATGTCTCAGGTCACCGTCACCGCTCAGAGGCGCGCGCAGTCGCTTGGCGAT
GTTCCGATTTCGGTGAATGTCGTTTCCGGCGATACGCTGGCCGTTCAGCGGATCAGCAACCTGCAGGATCTCTCGGCCTT
TGTGCCAAACCTTACCGTCCCCGAGCGGCCCGGCTCCACCGGCGCCTCGCTGCGCGGGCTTGGCACGGGCGGGCGCAACG
CCCTCTTCGACCAGGCCGTCATCGTGCAGGTTGACGGCATCACCAGCGCCCGCTCCGCCCAGTTCACGGTGCCTTATTTT
GATGTCGAACGCGTGGAAGTTCTGCGCGGCGCGCAAGGCGTTCTGTTCGGCAAGAACGCCACGGCCGGCGCGATCAATAT
CGTGACGGCAAATCCTACAGATACTTTCACCGGCAGCGTGACAGCCGGTTATGAATTCGAAAATCAGGGATATGTCATGG
AGGGCTTTGTCGCGGGCCCCCTGACAGAAACCCTCGGCGGGCGCCTTGCGGTCAAGTATGAGCGCGCGGGCGGCTTCATC
GAAGACAGGAACCTCGGCGAGGATGCAGGCGAGATTGATACCATCGCCGCGCGCGGAACGCTGCAATGGCGCCCGAACGA
CCGGCTGAATGCCCGGTTCAAGATTGATGTCGGCGAAGTCGATGAACGCGGGAACAATATCGAGATCGCCGCCTGCACGT
CCAACCTGGCGCGCATCCTCTCCATCTCCCCGACAGAAGACTGCATCATGAACCGCACCTCCGCGCGGTCCTTCATGGAT
GAAGACAATACCCGCTCGGCCGCCTTCATTGCAAACATTGACTATGAGATCGGGGATCATACGTTCTCATCGGTTTCCGG
CTATTCTCAATATGAACAGAGCACGGCGCGCGATCTGGACGTAACGCCTGTCGAGGCACTCAATCGCTATGTCGACGAGA
GCTATGATCAATACTATCAGGAGTTCAGGCTGATCTCTCCTGCAGACGGCCGCCTGACCTATATTCTCGGCGTAACGGGC
CAGTTTCAGAATATTGAACTGTCGGATGTTACCGATCTGAATGTCCTCGGCCTTCCCTTTGGCAATTTGTCACCGGCACC
TTTCAGTGCCGCCAGCAACCGCCGGTCCATTCAGTTTGCTGATCAGTCCACCGCTTCCTATTCCGCCTTTGCGCACGTCA
CCTTTAACGTCACCGATTCTTTCAGGATCCTTGGCGGCGCACGGTATACGGATGAAACAAAGGAAATCGACTATGTCGTG
ACACGGGCCTTGTGGGGCACAAATACCCCGGTCGTCACGCCGCTTGATATCGATCTGACGGGCCAGGAACGCAGCGAGTC
AAACTTCGATCCCCAGATTGGCGTTCAGTATGATCTGACAGATCGGTTGATGAGCTACTTCACGGCCTCGATCGTGCACA
AAGGCGGCGGGTTCAATATCGATGAAACCGACGGCCGGGCTATTGCCGACACCTTTACGTATCAGCCGGAAGAAGCCGAA
TCCTATGAAGCGGGGCTCAAATGGTCCGGCCGCGGCAGATATCTCAATCTCGCTGTCTTCCGGACAGATTTCTCGGATCT
TCAGGTCGCCAGCAATGATGGCACACGCACCGTGGTCCGCAACGCGGCAGTCGCCCGTTCAGAAGGGGTCGAAGTCGATG
GCTTCTGGCAACTTGGCGACTACATCACGCTGGCTGGCGGTCTCGCCTATACCGATGCGACCTTCCTGGAATACCCGGGC
GGCTCCTGTACGGCCGCGGCCGCCGCCGCAATTGCGCCCACCCCCTGCGTGGCCGATCTCAGTGGCAACCGGCTGACCTT
TGCCCCGGAATGGTCGGGAAATCTTGTGGCCGATGCACGGTTCCCGGTCCGGGACGGCCTGGAGGCAACCCTGGGCGCGA
CCCTCAGCTACAGAAGCGACCAGTTCGCCCAGGAAAATAATGATCCGACCCTCGCAATTGATGAGAACACGACCGTGGAT
CTGCGCGCCGGGCTGACTACGGAGGATGATCGCAAAAGCATTCGTCTGGTCGCCCGGAACCTGTTCGACGAGACTGTTCC
ATCCTTCCTGTTCCCCTTCCCCCGGGCGCCCGGTTCGACCGTGGCGATCTCTCCGCGGGGCCGGTCGGTCCTTCTTGAAC
TTTCTTCAAAGTTCTAG

Upstream 100 bases:

>100_bases
TCTTGCATACCGTCACCTCTATTTGTAAGCAATTACTCAACAACAAAAGCGGTCACCAACGAGTGTCAGCACCAGCAAAA
ACCCAGGGAGGGATCAAACA

Downstream 100 bases:

>100_bases
AAACGTCAGAGGCGATAGTGACAAGGACAACAACCATGCGGTGCTTTCTTGCGACACTGTTGACGTGCATGTCGGTTGGC
TTGACAGCCGGCTGCGCGTC

Product: outer membrane receptor (OMR) family protein

Products: NA

Alternate protein names: IPR65; IRPC [H]

Number of amino acids: Translated: 778; Mature: 777

Protein sequence:

>778_residues
MSDINKRIASGAGKFIRTTWLGHASALALLGGMALPAIAQETTPPPAAQEADTQEPATDELAVMSQVTVTAQRRAQSLGD
VPISVNVVSGDTLAVQRISNLQDLSAFVPNLTVPERPGSTGASLRGLGTGGRNALFDQAVIVQVDGITSARSAQFTVPYF
DVERVEVLRGAQGVLFGKNATAGAINIVTANPTDTFTGSVTAGYEFENQGYVMEGFVAGPLTETLGGRLAVKYERAGGFI
EDRNLGEDAGEIDTIAARGTLQWRPNDRLNARFKIDVGEVDERGNNIEIAACTSNLARILSISPTEDCIMNRTSARSFMD
EDNTRSAAFIANIDYEIGDHTFSSVSGYSQYEQSTARDLDVTPVEALNRYVDESYDQYYQEFRLISPADGRLTYILGVTG
QFQNIELSDVTDLNVLGLPFGNLSPAPFSAASNRRSIQFADQSTASYSAFAHVTFNVTDSFRILGGARYTDETKEIDYVV
TRALWGTNTPVVTPLDIDLTGQERSESNFDPQIGVQYDLTDRLMSYFTASIVHKGGGFNIDETDGRAIADTFTYQPEEAE
SYEAGLKWSGRGRYLNLAVFRTDFSDLQVASNDGTRTVVRNAAVARSEGVEVDGFWQLGDYITLAGGLAYTDATFLEYPG
GSCTAAAAAAIAPTPCVADLSGNRLTFAPEWSGNLVADARFPVRDGLEATLGATLSYRSDQFAQENNDPTLAIDENTTVD
LRAGLTTEDDRKSIRLVARNLFDETVPSFLFPFPRAPGSTVAISPRGRSVLLELSSKF

Sequences:

>Translated_778_residues
MSDINKRIASGAGKFIRTTWLGHASALALLGGMALPAIAQETTPPPAAQEADTQEPATDELAVMSQVTVTAQRRAQSLGD
VPISVNVVSGDTLAVQRISNLQDLSAFVPNLTVPERPGSTGASLRGLGTGGRNALFDQAVIVQVDGITSARSAQFTVPYF
DVERVEVLRGAQGVLFGKNATAGAINIVTANPTDTFTGSVTAGYEFENQGYVMEGFVAGPLTETLGGRLAVKYERAGGFI
EDRNLGEDAGEIDTIAARGTLQWRPNDRLNARFKIDVGEVDERGNNIEIAACTSNLARILSISPTEDCIMNRTSARSFMD
EDNTRSAAFIANIDYEIGDHTFSSVSGYSQYEQSTARDLDVTPVEALNRYVDESYDQYYQEFRLISPADGRLTYILGVTG
QFQNIELSDVTDLNVLGLPFGNLSPAPFSAASNRRSIQFADQSTASYSAFAHVTFNVTDSFRILGGARYTDETKEIDYVV
TRALWGTNTPVVTPLDIDLTGQERSESNFDPQIGVQYDLTDRLMSYFTASIVHKGGGFNIDETDGRAIADTFTYQPEEAE
SYEAGLKWSGRGRYLNLAVFRTDFSDLQVASNDGTRTVVRNAAVARSEGVEVDGFWQLGDYITLAGGLAYTDATFLEYPG
GSCTAAAAAAIAPTPCVADLSGNRLTFAPEWSGNLVADARFPVRDGLEATLGATLSYRSDQFAQENNDPTLAIDENTTVD
LRAGLTTEDDRKSIRLVARNLFDETVPSFLFPFPRAPGSTVAISPRGRSVLLELSSKF
>Mature_777_residues
SDINKRIASGAGKFIRTTWLGHASALALLGGMALPAIAQETTPPPAAQEADTQEPATDELAVMSQVTVTAQRRAQSLGDV
PISVNVVSGDTLAVQRISNLQDLSAFVPNLTVPERPGSTGASLRGLGTGGRNALFDQAVIVQVDGITSARSAQFTVPYFD
VERVEVLRGAQGVLFGKNATAGAINIVTANPTDTFTGSVTAGYEFENQGYVMEGFVAGPLTETLGGRLAVKYERAGGFIE
DRNLGEDAGEIDTIAARGTLQWRPNDRLNARFKIDVGEVDERGNNIEIAACTSNLARILSISPTEDCIMNRTSARSFMDE
DNTRSAAFIANIDYEIGDHTFSSVSGYSQYEQSTARDLDVTPVEALNRYVDESYDQYYQEFRLISPADGRLTYILGVTGQ
FQNIELSDVTDLNVLGLPFGNLSPAPFSAASNRRSIQFADQSTASYSAFAHVTFNVTDSFRILGGARYTDETKEIDYVVT
RALWGTNTPVVTPLDIDLTGQERSESNFDPQIGVQYDLTDRLMSYFTASIVHKGGGFNIDETDGRAIADTFTYQPEEAES
YEAGLKWSGRGRYLNLAVFRTDFSDLQVASNDGTRTVVRNAAVARSEGVEVDGFWQLGDYITLAGGLAYTDATFLEYPGG
SCTAAAAAAIAPTPCVADLSGNRLTFAPEWSGNLVADARFPVRDGLEATLGATLSYRSDQFAQENNDPTLAIDENTTVDL
RAGLTTEDDRKSIRLVARNLFDETVPSFLFPFPRAPGSTVAISPRGRSVLLELSSKF

Specific function: Receptor for the bacteriocin pesticin and for the siderophore yersiniabactin [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=179, Percent_Identity=29.608938547486, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 83934; Mature: 83802

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDINKRIASGAGKFIRTTWLGHASALALLGGMALPAIAQETTPPPAAQEADTQEPATDE
CCHHHHHHHHCCCCEEEEECCCHHHHHHHHCCHHCCHHHCCCCCCCCCCCCCCCCCCCHH
LAVMSQVTVTAQRRAQSLGDVPISVNVVSGDTLAVQRISNLQDLSAFVPNLTVPERPGST
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCHHHHHHHCCCCCCCCCCCCC
GASLRGLGTGGRNALFDQAVIVQVDGITSARSAQFTVPYFDVERVEVLRGAQGVLFGKNA
CCCEEECCCCCCCHHCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHCCCCCEEEECCC
TAGAINIVTANPTDTFTGSVTAGYEFENQGYVMEGFVAGPLTETLGGRLAVKYERAGGFI
CCCEEEEEECCCCCCCCCCEEECEEECCCCEEEEEEECCCHHHHCCCEEEEEECCCCCEE
EDRNLGEDAGEIDTIAARGTLQWRPNDRLNARFKIDVGEVDERGNNIEIAACTSNLARIL
ECCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHE
SISPTEDCIMNRTSARSFMDEDNTRSAAFIANIDYEIGDHTFSSVSGYSQYEQSTARDLD
ECCCCHHHHHCCHHHHHHHCCCCCCCEEEEEEECEECCCCCHHHCCCHHHHHHHHCCCCC
VTPVEALNRYVDESYDQYYQEFRLISPADGRLTYILGVTGQFQNIELSDVTDLNVLGLPF
CCHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCCCEEECCCCCCEEEECCC
GNLSPAPFSAASNRRSIQFADQSTASYSAFAHVTFNVTDSFRILGGARYTDETKEIDYVV
CCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCCEEEECCCCCCCCCHHHHHHE
TRALWGTNTPVVTPLDIDLTGQERSESNFDPQIGVQYDLTDRLMSYFTASIVHKGGGFNI
EHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCC
DETDGRAIADTFTYQPEEAESYEAGLKWSGRGRYLNLAVFRTDFSDLQVASNDGTRTVVR
CCCCCCEEEEEECCCCCCCCHHHCCCEECCCCCEEEEEEEEECCCCEEEECCCCCCHHHH
NAAVARSEGVEVDGFWQLGDYITLAGGLAYTDATFLEYPGGSCTAAAAAAIAPTPCVADL
HHHHHHCCCCCCCEEEECCCEEEEECCEEECCCEEEECCCCCCHHHHHHHCCCCCEEEEC
SGNRLTFAPEWSGNLVADARFPVRDGLEATLGATLSYRSDQFAQENNDPTLAIDENTTVD
CCCEEEECCCCCCCEEEECCCCCCCCCHHHHCCEEECCCCHHHHCCCCCEEEECCCCEEE
LRAGLTTEDDRKSIRLVARNLFDETVPSFLFPFPRAPGSTVAISPRGRSVLLELSSKF
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEECCC
>Mature Secondary Structure 
SDINKRIASGAGKFIRTTWLGHASALALLGGMALPAIAQETTPPPAAQEADTQEPATDE
CHHHHHHHHCCCCEEEEECCCHHHHHHHHCCHHCCHHHCCCCCCCCCCCCCCCCCCCHH
LAVMSQVTVTAQRRAQSLGDVPISVNVVSGDTLAVQRISNLQDLSAFVPNLTVPERPGST
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCHHHHHHHCCCCCCCCCCCCC
GASLRGLGTGGRNALFDQAVIVQVDGITSARSAQFTVPYFDVERVEVLRGAQGVLFGKNA
CCCEEECCCCCCCHHCCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHCCCCCEEEECCC
TAGAINIVTANPTDTFTGSVTAGYEFENQGYVMEGFVAGPLTETLGGRLAVKYERAGGFI
CCCEEEEEECCCCCCCCCCEEECEEECCCCEEEEEEECCCHHHHCCCEEEEEECCCCCEE
EDRNLGEDAGEIDTIAARGTLQWRPNDRLNARFKIDVGEVDERGNNIEIAACTSNLARIL
ECCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHE
SISPTEDCIMNRTSARSFMDEDNTRSAAFIANIDYEIGDHTFSSVSGYSQYEQSTARDLD
ECCCCHHHHHCCHHHHHHHCCCCCCCEEEEEEECEECCCCCHHHCCCHHHHHHHHCCCCC
VTPVEALNRYVDESYDQYYQEFRLISPADGRLTYILGVTGQFQNIELSDVTDLNVLGLPF
CCHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCCCEEECCCCCCEEEECCC
GNLSPAPFSAASNRRSIQFADQSTASYSAFAHVTFNVTDSFRILGGARYTDETKEIDYVV
CCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEECCCEEEECCCCCCCCCHHHHHHE
TRALWGTNTPVVTPLDIDLTGQERSESNFDPQIGVQYDLTDRLMSYFTASIVHKGGGFNI
EHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCC
DETDGRAIADTFTYQPEEAESYEAGLKWSGRGRYLNLAVFRTDFSDLQVASNDGTRTVVR
CCCCCCEEEEEECCCCCCCCHHHCCCEECCCCCEEEEEEEEECCCCEEEECCCCCCHHHH
NAAVARSEGVEVDGFWQLGDYITLAGGLAYTDATFLEYPGGSCTAAAAAAIAPTPCVADL
HHHHHHCCCCCCCEEEECCCEEEEECCEEECCCEEEECCCCCCHHHHHHHCCCCCEEEEC
SGNRLTFAPEWSGNLVADARFPVRDGLEATLGATLSYRSDQFAQENNDPTLAIDENTTVD
CCCEEEECCCCCCCEEEECCCCCCCCCHHHHCCEEECCCCHHHHCCCCCEEEECCCCEEE
LRAGLTTEDDRKSIRLVARNLFDETVPSFLFPFPRAPGSTVAISPRGRSVLLELSSKF
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA