Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797208

Identifier: 114797208

GI number: 114797208

Start: 3114397

End: 3115737

Strand: Reverse

Name: 114797208

Synonym: HNE_2958

Alternate gene names: NA

Gene position: 3115737-3114397 (Counterclockwise)

Preceding gene: 114799928

Following gene: 114797792

Centisome position: 84.09

GC content: 62.57

Gene sequence:

>1341_bases
ATGGGCCGTTTGAAAACACTGGCAGGGGTGGTTGTGGTGGCGGGCCTGATGGCGGCCTGTCAGTCGGCGCAGGACGAACT
GCCGCCGCCCGCATCGCTCACCGCGCCGCAAATCGCTGAAAACGCCGCGACGCCGGAAACCGAAGCGCCGCTCGTCCTGA
TGATCGGGCTCGATGGCCTCAACCCGTCCATGATTGACCGCTGGGAGGCGCCAAACCTCAAGGCACTTGCTGCGCGCGGC
GTGCGTGCCGAAGCGATGTATCCGGTGATGCCAAGCGTTACCTTCGTGAACTTCTACTCGCTCGCAACCGGGCTTTATCC
CGAGCATCACGGGATGGTGGAGAATTACCCGTATGACAAAGCGACCGATCAACAGTTTGACCGGGCAACCGGGCCGACCG
AAGAACACTGGTGGCAGGGCGAGCCGATCTGGGTAACCGCCGAGAAGCAGGGCCTGCCGACGTCCATCATGTTCTGGCTT
GGCTCAGAGGTGCCCCATGATGGCGTGCGGCCTACGCGCTGGACCCCCTATGAACACAACAAGCCCTATCAGGACCGGGT
GGATGAAGTGATGGCCTGGTACGACGCCCCGGAAGCCGAACTGCCCCGCTTTGCGGCGGTGTATTTCGACCGGGTGGATA
CTGCTGCCCACTATTTCGGACCGGGCTCGGACAAGGCCAAGGAAGCGCTTGCGGAAGTGGACGGGTATGTCGGCCAGCTG
GCTCAAGGCCTGAAAGACCGCGGCCTGCTCGAGCGCACGACGATCCTTGTCGTATCAGATCATGGCATGGTCTGGGTTGA
TCCGGAGAAGGTGATGGACATCGGCCAGTTCCTTGATCTGGACGCGCTGACCGTGCCGCAATTCAACGGCCCCTATGGCG
GCTCCAACCATCCGTTCCTGCACATCTATGGCGCGGGCGACGCGCTTGAGACTGCCTATGAAGGCCTCAAGGATTTTGAC
GAGCACATCCATGTCTACAAGCGCGGGGAAATGCCCGATCACTATCATTTCGACCACCCCACACGCGGGCCGGATCTCTT
CCTCGTGGCTGATCCGGGCTGGTCGGTGCGCAACGCCAATGTCGGCGGCTGGCGCGCGCCAATCCCCGGCCAGCACGGCT
ATGACAACCTGGACCCCAGCATGGCTGCGACCTTTATCGGCGCTGGCCCGATCTTTCCCGAAGGCGAAACAGCTGCGCCC
TTCGAGAATGTGAACGTCTATCTGATGATTGCCTGCGCGCTCGGAATTGAGCCGGCGCAGACTGACGGCAATCCAGGCGT
GGTGGAGATGGTGACCGGCGGACGCTGCCCGGCGGCCCGTGTTCAGGCCGCTCGGGAATAG

Upstream 100 bases:

>100_bases
ACGCCTCGCGTCACGCCTTTTTCACCCCATGGGCTTCACATCGCCGCTACATTCGGGGTCTAAGGCGGAAGGAATTTCAC
CATGTGTAAGGGAGCCGGGT

Downstream 100 bases:

>100_bases
GGCATCCAGCTGGCCGGCGGGGCGTTACTGTCCCAGCCGGTCGGTTTCCTCGCCGATAATATCCATGAGTTCGGGATGTT
CAGCCTGGAGCGTGGTGAGG

Product: type I phosphodiesterase/nucleotide pyrophosphatase family protein

Products: NA

Alternate protein names: Nucleotide Diphosphatase; Type I Phosphodiesterase/Nucleotide Pyrophosphatase Protein; Type I Phosphodiesterase/Nucleotide Pyrophosphatase; Phosphodiesterase-Nucleotide Pyrophosphatase; RB13-6 Antigen; Phosphodiesterase-Nucleotide Pyrophosphatase-Like Protein; Sulfatase; Nucleotide Pyrophosphatase Family Protein

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MGRLKTLAGVVVVAGLMAACQSAQDELPPPASLTAPQIAENAATPETEAPLVLMIGLDGLNPSMIDRWEAPNLKALAARG
VRAEAMYPVMPSVTFVNFYSLATGLYPEHHGMVENYPYDKATDQQFDRATGPTEEHWWQGEPIWVTAEKQGLPTSIMFWL
GSEVPHDGVRPTRWTPYEHNKPYQDRVDEVMAWYDAPEAELPRFAAVYFDRVDTAAHYFGPGSDKAKEALAEVDGYVGQL
AQGLKDRGLLERTTILVVSDHGMVWVDPEKVMDIGQFLDLDALTVPQFNGPYGGSNHPFLHIYGAGDALETAYEGLKDFD
EHIHVYKRGEMPDHYHFDHPTRGPDLFLVADPGWSVRNANVGGWRAPIPGQHGYDNLDPSMAATFIGAGPIFPEGETAAP
FENVNVYLMIACALGIEPAQTDGNPGVVEMVTGGRCPAARVQAARE

Sequences:

>Translated_446_residues
MGRLKTLAGVVVVAGLMAACQSAQDELPPPASLTAPQIAENAATPETEAPLVLMIGLDGLNPSMIDRWEAPNLKALAARG
VRAEAMYPVMPSVTFVNFYSLATGLYPEHHGMVENYPYDKATDQQFDRATGPTEEHWWQGEPIWVTAEKQGLPTSIMFWL
GSEVPHDGVRPTRWTPYEHNKPYQDRVDEVMAWYDAPEAELPRFAAVYFDRVDTAAHYFGPGSDKAKEALAEVDGYVGQL
AQGLKDRGLLERTTILVVSDHGMVWVDPEKVMDIGQFLDLDALTVPQFNGPYGGSNHPFLHIYGAGDALETAYEGLKDFD
EHIHVYKRGEMPDHYHFDHPTRGPDLFLVADPGWSVRNANVGGWRAPIPGQHGYDNLDPSMAATFIGAGPIFPEGETAAP
FENVNVYLMIACALGIEPAQTDGNPGVVEMVTGGRCPAARVQAARE
>Mature_445_residues
GRLKTLAGVVVVAGLMAACQSAQDELPPPASLTAPQIAENAATPETEAPLVLMIGLDGLNPSMIDRWEAPNLKALAARGV
RAEAMYPVMPSVTFVNFYSLATGLYPEHHGMVENYPYDKATDQQFDRATGPTEEHWWQGEPIWVTAEKQGLPTSIMFWLG
SEVPHDGVRPTRWTPYEHNKPYQDRVDEVMAWYDAPEAELPRFAAVYFDRVDTAAHYFGPGSDKAKEALAEVDGYVGQLA
QGLKDRGLLERTTILVVSDHGMVWVDPEKVMDIGQFLDLDALTVPQFNGPYGGSNHPFLHIYGAGDALETAYEGLKDFDE
HIHVYKRGEMPDHYHFDHPTRGPDLFLVADPGWSVRNANVGGWRAPIPGQHGYDNLDPSMAATFIGAGPIFPEGETAAPF
ENVNVYLMIACALGIEPAQTDGNPGVVEMVTGGRCPAARVQAARE

Specific function: Unknown

COG id: COG1524

COG function: function code R; Uncharacterized proteins of the AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI111160296, Length=404, Percent_Identity=31.9306930693069, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI170650661, Length=432, Percent_Identity=31.25, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI91823602, Length=387, Percent_Identity=30.4909560723514, Blast_Score=185, Evalue=9e-47,
Organism=Homo sapiens, GI195947389, Length=389, Percent_Identity=30.3341902313625, Blast_Score=185, Evalue=9e-47,
Organism=Homo sapiens, GI23503267, Length=420, Percent_Identity=29.7619047619048, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI45545421, Length=386, Percent_Identity=30.8290155440415, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI7662358, Length=379, Percent_Identity=28.2321899736148, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI91823274, Length=441, Percent_Identity=27.6643990929705, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI11034849, Length=388, Percent_Identity=25.2577319587629, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI310110107, Length=397, Percent_Identity=23.4256926952141, Blast_Score=129, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI212646262, Length=387, Percent_Identity=29.1989664082687, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI115533126, Length=387, Percent_Identity=29.1989664082687, Blast_Score=175, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI115533128, Length=387, Percent_Identity=29.1989664082687, Blast_Score=175, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI115533130, Length=436, Percent_Identity=25.2293577981651, Blast_Score=157, Evalue=7e-39,
Organism=Caenorhabditis elegans, GI115533132, Length=433, Percent_Identity=25.8660508083141, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17569567, Length=379, Percent_Identity=26.6490765171504, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71981768, Length=417, Percent_Identity=23.9808153477218, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI71986535, Length=431, Percent_Identity=22.2737819025522, Blast_Score=97, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6319874, Length=457, Percent_Identity=26.2582056892779, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6320821, Length=460, Percent_Identity=26.5217391304348, Blast_Score=126, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48826; Mature: 48695

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLKTLAGVVVVAGLMAACQSAQDELPPPASLTAPQIAENAATPETEAPLVLMIGLDGL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCC
NPSMIDRWEAPNLKALAARGVRAEAMYPVMPSVTFVNFYSLATGLYPEHHGMVENYPYDK
CHHHHHCCCCCCHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ATDQQFDRATGPTEEHWWQGEPIWVTAEKQGLPTSIMFWLGSEVPHDGVRPTRWTPYEHN
CCHHHHHHCCCCCHHHCCCCCCEEEEECCCCCCCEEHEEECCCCCCCCCCCCCCCCCCCC
KPYQDRVDEVMAWYDAPEAELPRFAAVYFDRVDTAAHYFGPGSDKAKEALAEVDGYVGQL
CCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AQGLKDRGLLERTTILVVSDHGMVWVDPEKVMDIGQFLDLDALTVPQFNGPYGGSNHPFL
HHHHHHCCCEEEEEEEEEECCCEEEECHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEE
HIYGAGDALETAYEGLKDFDEHIHVYKRGEMPDHYHFDHPTRGPDLFLVADPGWSVRNAN
EEEECCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEECCC
VGGWRAPIPGQHGYDNLDPSMAATFIGAGPIFPEGETAAPFENVNVYLMIACALGIEPAQ
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCC
TDGNPGVVEMVTGGRCPAARVQAARE
CCCCCCEEEEECCCCCCHHHHHHCCC
>Mature Secondary Structure 
GRLKTLAGVVVVAGLMAACQSAQDELPPPASLTAPQIAENAATPETEAPLVLMIGLDGL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCC
NPSMIDRWEAPNLKALAARGVRAEAMYPVMPSVTFVNFYSLATGLYPEHHGMVENYPYDK
CHHHHHCCCCCCHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ATDQQFDRATGPTEEHWWQGEPIWVTAEKQGLPTSIMFWLGSEVPHDGVRPTRWTPYEHN
CCHHHHHHCCCCCHHHCCCCCCEEEEECCCCCCCEEHEEECCCCCCCCCCCCCCCCCCCC
KPYQDRVDEVMAWYDAPEAELPRFAAVYFDRVDTAAHYFGPGSDKAKEALAEVDGYVGQL
CCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AQGLKDRGLLERTTILVVSDHGMVWVDPEKVMDIGQFLDLDALTVPQFNGPYGGSNHPFL
HHHHHHCCCEEEEEEEEEECCCEEEECHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCEE
HIYGAGDALETAYEGLKDFDEHIHVYKRGEMPDHYHFDHPTRGPDLFLVADPGWSVRNAN
EEEECCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEECCC
VGGWRAPIPGQHGYDNLDPSMAATFIGAGPIFPEGETAAPFENVNVYLMIACALGIEPAQ
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCC
TDGNPGVVEMVTGGRCPAARVQAARE
CCCCCCEEEEECCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA