Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797187

Identifier: 114797187

GI number: 114797187

Start: 2389208

End: 2389942

Strand: Direct

Name: 114797187

Synonym: HNE_2288

Alternate gene names: NA

Gene position: 2389208-2389942 (Clockwise)

Preceding gene: 114798769

Following gene: 114799871

Centisome position: 64.49

GC content: 66.8

Gene sequence:

>735_bases
ATGGCCCGCCCCTTTGCCCTGAAGGACTTTGCCTACGCCCATCGCGGGCTGTGGACGAAAGACGGTCTGCCGGAGAATTC
CCTCGGCAGCTTCAGCGCAGCGGCGGACGCCGGCCTCGGCATCGAGCTGGACCTGCGCCCCTCGGCCGATGGCGAGGTGA
TGGTGTTCCATGACCCGTTATTGCAGCGCATGACCGGCGCTGAGGGACAGTTCGAGAACTTTCCGGCCAGCACGCTCAAA
ACCCACCGCCTGAATGGCGGGGACGAGCCGGTGCCCTCGTTTGACGATCTCCTCTCCTTCTGGCCTCAGGATCTGCCGGT
GCTGGCGGAGATGAAGATCGATGGCAGCACTGATCCGATGGCCTTCGCGCAGACAGTCGGCGCGCGGCTGATGGACTGGC
CGGGCCTCGCCGCCGCAATGAGTTTTTCCGACATTGCCGTGCGCGCGCTGCCCGACGGGCTGATGCGGGGGCAGCTGATC
GGACCGAGCAACCAGTTCGGGGACGCCTATTTTGACAGCTTTGCCCGGCGCGCCATGGCCGATGGCATCGATTACCTCGC
CGTCCACTATACCGACGCGGCGCGCGCTGCGGCCGCCACGGCGGACCGCGGCATGCCTGTCGTCGTCTGGACGGTGCGCA
CGGAGGCCGATCTGGCCGCCCTGAAACCCTACGGCGCCGCGATAATCTTCGAACACTTCAGCCCGGCGCTGGCGCTGGAC
GCCATCGCGCCCTAG

Upstream 100 bases:

>100_bases
AAGTGGGCGCGCATGCCCGCTCGGCCGTGGCCTGCCCGACCCTGCCGCTCGGTGTGGCCGTTGAAGTCGACGCGATCTTC
GAGATCGCCTGAGGCACAAA

Downstream 100 bases:

>100_bases
ATTTGAGGGCCATGGACGCTGCCCTCCCCCAGATAACTTCCGTCTCCTCCCTCGCCGGCATTGATCCGGCCGAGTGGAAT
GCTGTCGCCAACCCGCCCGG

Product: glycerophosphoryl diester phosphodiesterase family protein

Products: NA

Alternate protein names: Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphoryl Diester Phosphodiesterase Protein; Glycerophosphoryl Diester Phosphodiesterase Family; Phosphodiesterase

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MARPFALKDFAYAHRGLWTKDGLPENSLGSFSAAADAGLGIELDLRPSADGEVMVFHDPLLQRMTGAEGQFENFPASTLK
THRLNGGDEPVPSFDDLLSFWPQDLPVLAEMKIDGSTDPMAFAQTVGARLMDWPGLAAAMSFSDIAVRALPDGLMRGQLI
GPSNQFGDAYFDSFARRAMADGIDYLAVHYTDAARAAAATADRGMPVVVWTVRTEADLAALKPYGAAIIFEHFSPALALD
AIAP

Sequences:

>Translated_244_residues
MARPFALKDFAYAHRGLWTKDGLPENSLGSFSAAADAGLGIELDLRPSADGEVMVFHDPLLQRMTGAEGQFENFPASTLK
THRLNGGDEPVPSFDDLLSFWPQDLPVLAEMKIDGSTDPMAFAQTVGARLMDWPGLAAAMSFSDIAVRALPDGLMRGQLI
GPSNQFGDAYFDSFARRAMADGIDYLAVHYTDAARAAAATADRGMPVVVWTVRTEADLAALKPYGAAIIFEHFSPALALD
AIAP
>Mature_243_residues
ARPFALKDFAYAHRGLWTKDGLPENSLGSFSAAADAGLGIELDLRPSADGEVMVFHDPLLQRMTGAEGQFENFPASTLKT
HRLNGGDEPVPSFDDLLSFWPQDLPVLAEMKIDGSTDPMAFAQTVGARLMDWPGLAAAMSFSDIAVRALPDGLMRGQLIG
PSNQFGDAYFDSFARRAMADGIDYLAVHYTDAARAAAATADRGMPVVVWTVRTEADLAALKPYGAAIIFEHFSPALALDA
IAP

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26164; Mature: 26033

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPFALKDFAYAHRGLWTKDGLPENSLGSFSAAADAGLGIELDLRPSADGEVMVFHDPL
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCEEEEECHH
LQRMTGAEGQFENFPASTLKTHRLNGGDEPVPSFDDLLSFWPQDLPVLAEMKIDGSTDPM
HHHHCCCCCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCHH
AFAQTVGARLMDWPGLAAAMSFSDIAVRALPDGLMRGQLIGPSNQFGDAYFDSFARRAMA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCHHHHHHHHHHHHH
DGIDYLAVHYTDAARAAAATADRGMPVVVWTVRTEADLAALKPYGAAIIFEHFSPALALD
CCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCHHHHCCCCEEEEEECCCCHHHHH
AIAP
CCCC
>Mature Secondary Structure 
ARPFALKDFAYAHRGLWTKDGLPENSLGSFSAAADAGLGIELDLRPSADGEVMVFHDPL
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCEEEEECHH
LQRMTGAEGQFENFPASTLKTHRLNGGDEPVPSFDDLLSFWPQDLPVLAEMKIDGSTDPM
HHHHCCCCCCCCCCCHHHHHEECCCCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCCCHH
AFAQTVGARLMDWPGLAAAMSFSDIAVRALPDGLMRGQLIGPSNQFGDAYFDSFARRAMA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCHHHHHHHHHHHHH
DGIDYLAVHYTDAARAAAATADRGMPVVVWTVRTEADLAALKPYGAAIIFEHFSPALALD
CCCCEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCHHHHCCCCEEEEEECCCCHHHHH
AIAP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA