Click here to switch to the map view.

The map label for this gene is yciI [H]

Identifier: 114331520

GI number: 114331520

Start: 1603293

End: 1603595

Strand: Reverse

Name: yciI [H]

Synonym: Neut_1533

Alternate gene names: 114331520

Gene position: 1603595-1603293 (Counterclockwise)

Preceding gene: 114331521

Following gene: 114331519

Centisome position: 60.26

GC content: 53.14

Gene sequence:

>303_bases
ATGCTCTATTTAATATACGGTGAAGATGTTCCGGATAGCCTGGCGCAACGGGTAGTTAACCGGCCTGCACATTTGGCGCG
AATCCAGGAATTACAGGAGCAGGGGAGACTGTTATTGGCAGGCCCTTGTCCGGCAATTGATAGCGTGGACCCCGGGCCGG
CGGGTTTTACCGGAAGCTTGATAGTGGCAGAGTTTGCGTCACTGAATGCGGCTCAGGAATGGGCAGATGCTGATCCATAC
CTGGCAGCCGGTATTTATGCAAAAGTGGCCGTAAAGCCGTTCAGGAAGGTTCTGCCTGAATAA

Upstream 100 bases:

>100_bases
ACTAATCTGTGGTAATAAAGCTTGTGTATCCAAATGATATTCAGGCCTGCCACAAAGAACCAGAACCGTATGAGATTTGT
ACTGACTAAGAGAAAATAAC

Downstream 100 bases:

>100_bases
ATTGGTGGTGGCCAGAGATTTTTCCAGTTTATTCAGGCCTGAATATTTTCAAAAGGAATCTGTAAAAGCTTGTTTGTTTT
CAAAAAGAACTTATCCGTGT

Product: YciI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MLYLIYGEDVPDSLAQRVVNRPAHLARIQELQEQGRLLLAGPCPAIDSVDPGPAGFTGSLIVAEFASLNAAQEWADADPY
LAAGIYAKVAVKPFRKVLPE

Sequences:

>Translated_100_residues
MLYLIYGEDVPDSLAQRVVNRPAHLARIQELQEQGRLLLAGPCPAIDSVDPGPAGFTGSLIVAEFASLNAAQEWADADPY
LAAGIYAKVAVKPFRKVLPE
>Mature_100_residues
MLYLIYGEDVPDSLAQRVVNRPAHLARIQELQEQGRLLLAGPCPAIDSVDPGPAGFTGSLIVAEFASLNAAQEWADADPY
LAAGIYAKVAVKPFRKVLPE

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yciI family [H]

Homologues:

Organism=Escherichia coli, GI87081861, Length=98, Percent_Identity=66.3265306122449, Blast_Score=140, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR005545 [H]

Pfam domain/function: PF03795 YCII [H]

EC number: NA

Molecular weight: Translated: 10746; Mature: 10746

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLIYGEDVPDSLAQRVVNRPAHLARIQELQEQGRLLLAGPCPAIDSVDPGPAGFTGSL
CEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHH
IVAEFASLNAAQEWADADPYLAAGIYAKVAVKPFRKVLPE
HHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLYLIYGEDVPDSLAQRVVNRPAHLARIQELQEQGRLLLAGPCPAIDSVDPGPAGFTGSL
CEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHH
IVAEFASLNAAQEWADADPYLAAGIYAKVAVKPFRKVLPE
HHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]