Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477548

Identifier: 113477548

GI number: 113477548

Start: 6370825

End: 6371025

Strand: Reverse

Name: 113477548

Synonym: Tery_4128

Alternate gene names: NA

Gene position: 6371025-6370825 (Counterclockwise)

Preceding gene: 113477549

Following gene: 113477547

Centisome position: 82.21

GC content: 31.84

Gene sequence:

>201_bases
ATGAAAGTAATGTTACGCAATAATGAAGCAGGAAAATTAGAAGTTTATGTTGCTAAGAAAGACTTGGAAGAAGAAGTTGT
CTCACAAAAAATTGAGGGAGACAATAAAATTTTAACTTTAGGAAATGGTTGGGAATTATCTATCCCTAAAGACCAACCAG
AAAAATTACCCACAACAATAGAAGCTAAGAGATTAGACTAA

Upstream 100 bases:

>100_bases
TCTTACAAAAATTTTATATTTATTCAGTGCATTTCATCAAAAAAGGAATGGTTATCGGTTGTCGTCAAAATGAAATTGAA
CTTGTGGAGGAAAACTACTC

Downstream 100 bases:

>100_bases
AATTTTCTTTTTTTCCATGGTTACTCCTTATTTTTTGACCACCAGATGAGATTTATATCTTGTTTTGGTGGTTTTTTTTG
TTACAGGACTTACTCATAAC

Product: NifT/FixU

Products: NA

Alternate protein names: NifT/FixU; NifT/FixU Family Protein; NifT Protein

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MKVMLRNNEAGKLEVYVAKKDLEEEVVSQKIEGDNKILTLGNGWELSIPKDQPEKLPTTIEAKRLD

Sequences:

>Translated_66_residues
MKVMLRNNEAGKLEVYVAKKDLEEEVVSQKIEGDNKILTLGNGWELSIPKDQPEKLPTTIEAKRLD
>Mature_66_residues
MKVMLRNNEAGKLEVYVAKKDLEEEVVSQKIEGDNKILTLGNGWELSIPKDQPEKLPTTIEAKRLD

Specific function: Unknown

COG id: COG5554

COG function: function code Q; Nitrogen fixation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7495; Mature: 7495

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVMLRNNEAGKLEVYVAKKDLEEEVVSQKIEGDNKILTLGNGWELSIPKDQPEKLPTTI
CEEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCEE
EAKRLD
EEEECC
>Mature Secondary Structure
MKVMLRNNEAGKLEVYVAKKDLEEEVVSQKIEGDNKILTLGNGWELSIPKDQPEKLPTTI
CEEEEECCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCCCCCEE
EAKRLD
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA