Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477544

Identifier: 113477544

GI number: 113477544

Start: 6362652

End: 6363701

Strand: Reverse

Name: 113477544

Synonym: Tery_4124

Alternate gene names: NA

Gene position: 6363701-6362652 (Counterclockwise)

Preceding gene: 113477545

Following gene: 113477543

Centisome position: 82.11

GC content: 40.76

Gene sequence:

>1050_bases
ATGAAAGTTATTGCTTGGCCAGCATTTAAAACGAAGCATAAAAATCCCTATAACTGGCTGTTATATTCTCAAATAGTTAA
ACAAGGGGTTACGGTGACAGAGTTTTCTCTCAGCAAGCTTTTGCGCCAAGAATACCATATTTTTCATCTTCATTGGGCAA
TGGAAACTATTGTGCGTCACCCAAACCGAGCTGTAGCAGCTTTGCGGGCTATAGCTATGCTCTTGGCAATAGACTGGGTT
AGGGCTAGAGGAACAAAGATTATTTGGACAATTCACGACCGACGGCCTCACAGTTTACTACATCCTCAATTAGCCGCATG
GTTTCAGTCAGAGTTCGTTAAGCGGGTAGACGGTTGTATCAGTCATTGTCAAGCAAGCAAAGAGTGGGCTATGTCGACAT
GGACATATTTGAGCGATCGCCCCCATACAATTATTCCTCATGGCCATTATCGAGAGTTTTACCCTAATAGTATAAGTTGT
GAGACAGCTAGAGCTAATTTAGATATTCCTTCTGAGTACCATTTACTTTTGTTTCTGGGTTACATTGACTGCTACAAAAA
TGTGCCTCATTTGGTCAGAATTTTTCGAGAGTTGGCGCCCACAAATTGGATGTTGTTAGTGGCAGGTAAGCTAGAAGTTC
CAGAGCTTGGTGCTCAGATATCTGAGGCAGCAGGAAATGATTTTGCTGTGAGGTTAAAGTTTGGGTATATACCCGATGAA
CAGTTACAAACATATTTTAAGGCTGCAAGTTTAGTTGTTTTACCGTTTCAAGAGATTTTAAATTCAGGTAGCACATTATT
GGCTCTTTCTTTTAATTGTCCTGTGTTGGTACCTGAGGAGGGAGGGATGGCAGAATTACAGGAACAGGTAGGACAAAATT
GGTTAAAATTATATCAAGGGGAGTTAACAACAGAGGTTTTAAAGTTAGGTTTGGAGTGGGCTTTGGAGCAGGGGCGATCG
CCACAGGCTAATTTAGAACAGTTAGAATGGTCGATATTAGGTCAGCAGACTATAGAAACTTATGAAAATATTGTCAACTT
CTATTCTTAA

Upstream 100 bases:

>100_bases
TTATTTCGCAGATTTAGAAAAAAATCAATATTAAGCCATAGCATCTAGGGTAGTTTGAATGAAATTACTCAAATACAAAT
ATTAGTTAATTTAAATTTAG

Downstream 100 bases:

>100_bases
ATAATTCTTGTACAGTTAGGGAAGATACATGAGTTTATCTGCATTTAAACGTTACGTAAAAGAAATAGGTAATTATGGAT
TATATCTATGGCAAAAACCA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Gt4J; Group 1 Glycosyl Transferase; Lipopolysaccharide Transferase Family Protein; GumI Protein; Glycosyl Transferase Group 1 Family Protein

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MKVIAWPAFKTKHKNPYNWLLYSQIVKQGVTVTEFSLSKLLRQEYHIFHLHWAMETIVRHPNRAVAALRAIAMLLAIDWV
RARGTKIIWTIHDRRPHSLLHPQLAAWFQSEFVKRVDGCISHCQASKEWAMSTWTYLSDRPHTIIPHGHYREFYPNSISC
ETARANLDIPSEYHLLLFLGYIDCYKNVPHLVRIFRELAPTNWMLLVAGKLEVPELGAQISEAAGNDFAVRLKFGYIPDE
QLQTYFKAASLVVLPFQEILNSGSTLLALSFNCPVLVPEEGGMAELQEQVGQNWLKLYQGELTTEVLKLGLEWALEQGRS
PQANLEQLEWSILGQQTIETYENIVNFYS

Sequences:

>Translated_349_residues
MKVIAWPAFKTKHKNPYNWLLYSQIVKQGVTVTEFSLSKLLRQEYHIFHLHWAMETIVRHPNRAVAALRAIAMLLAIDWV
RARGTKIIWTIHDRRPHSLLHPQLAAWFQSEFVKRVDGCISHCQASKEWAMSTWTYLSDRPHTIIPHGHYREFYPNSISC
ETARANLDIPSEYHLLLFLGYIDCYKNVPHLVRIFRELAPTNWMLLVAGKLEVPELGAQISEAAGNDFAVRLKFGYIPDE
QLQTYFKAASLVVLPFQEILNSGSTLLALSFNCPVLVPEEGGMAELQEQVGQNWLKLYQGELTTEVLKLGLEWALEQGRS
PQANLEQLEWSILGQQTIETYENIVNFYS
>Mature_349_residues
MKVIAWPAFKTKHKNPYNWLLYSQIVKQGVTVTEFSLSKLLRQEYHIFHLHWAMETIVRHPNRAVAALRAIAMLLAIDWV
RARGTKIIWTIHDRRPHSLLHPQLAAWFQSEFVKRVDGCISHCQASKEWAMSTWTYLSDRPHTIIPHGHYREFYPNSISC
ETARANLDIPSEYHLLLFLGYIDCYKNVPHLVRIFRELAPTNWMLLVAGKLEVPELGAQISEAAGNDFAVRLKFGYIPDE
QLQTYFKAASLVVLPFQEILNSGSTLLALSFNCPVLVPEEGGMAELQEQVGQNWLKLYQGELTTEVLKLGLEWALEQGRS
PQANLEQLEWSILGQQTIETYENIVNFYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40174; Mature: 40174

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIAWPAFKTKHKNPYNWLLYSQIVKQGVTVTEFSLSKLLRQEYHIFHLHWAMETIVRH
CCEEECCCHHCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
PNRAVAALRAIAMLLAIDWVRARGTKIIWTIHDRRPHSLLHPQLAAWFQSEFVKRVDGCI
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
SHCQASKEWAMSTWTYLSDRPHTIIPHGHYREFYPNSISCETARANLDIPSEYHLLLFLG
HHHHCCHHHHHHHHHHHCCCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
YIDCYKNVPHLVRIFRELAPTNWMLLVAGKLEVPELGAQISEAAGNDFAVRLKFGYIPDE
HHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCHH
QLQTYFKAASLVVLPFQEILNSGSTLLALSFNCPVLVPEEGGMAELQEQVGQNWLKLYQG
HHHHHHHHHHHEEEEHHHHHCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHH
ELTTEVLKLGLEWALEQGRSPQANLEQLEWSILGQQTIETYENIVNFYS
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVIAWPAFKTKHKNPYNWLLYSQIVKQGVTVTEFSLSKLLRQEYHIFHLHWAMETIVRH
CCEEECCCHHCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHC
PNRAVAALRAIAMLLAIDWVRARGTKIIWTIHDRRPHSLLHPQLAAWFQSEFVKRVDGCI
CCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
SHCQASKEWAMSTWTYLSDRPHTIIPHGHYREFYPNSISCETARANLDIPSEYHLLLFLG
HHHHCCHHHHHHHHHHHCCCCCEECCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
YIDCYKNVPHLVRIFRELAPTNWMLLVAGKLEVPELGAQISEAAGNDFAVRLKFGYIPDE
HHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCHH
QLQTYFKAASLVVLPFQEILNSGSTLLALSFNCPVLVPEEGGMAELQEQVGQNWLKLYQG
HHHHHHHHHHHEEEEHHHHHCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHH
ELTTEVLKLGLEWALEQGRSPQANLEQLEWSILGQQTIETYENIVNFYS
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA