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The map label for this gene is yibD [C]

Identifier: 113477545

GI number: 113477545

Start: 6363768

End: 6364736

Strand: Reverse

Name: yibD [C]

Synonym: Tery_4125

Alternate gene names: 113477545

Gene position: 6364736-6363768 (Counterclockwise)

Preceding gene: 113477546

Following gene: 113477544

Centisome position: 82.12

GC content: 31.68

Gene sequence:

>969_bases
ATGATTGATTTTACTATTGCAATTCCTACTTACAATGGCGCAGAAAAATTACCATTAGTTCTAGAAAAACTAAATTCTCA
AATCAATACAGAGAAATTATCGTGGGAAGTAATTGTTGTAGACAATAACAGCCAAGATAATACAGAACAAGTCATTAGAG
AATATCAAAAAAACTGGCATCAAGAAAATAGATTAAAATATTTTTTTGAGGAGAAACAAGGAGCAGGTTTTGCTAGAAAA
AAGGCTGTTCAAGTAGCAATTTCTCCTTTAATTGGTTTTCTAGATGATGATAATATTCCTGCAGAAAATTGGGTTGCAGC
AGCTTATGAGTTTGCTCAAAAATATCCCAAAGCAGGTGCTTATGCTAGTCAAATACATGGAGATTTTGAGGGAAAATTAC
CTCCTAATTTTAATCGAATTCAACCATTTTTTGCTATTACTGAAAGGGGGGGTAAACCATTACTATATAAACCTAAATCA
AAAGTAATACCTCCGTCCGCAGGATTAGTAATTCGGAAGAAAGCTTGGTTAGAAAGTGTTCCAAAGCACTGTATTTTGAG
TGGTAGAAAACCAGGTTCAATGTTAACAGGTGAGGATACAGAAACTATTGGTTATATTCAACAAGCAGGTTGGGAAATTT
GGTATAATCCGAGCATGGAGGTAACTCACAAAATTCCTAAAAATAGATTGGAAAAAGATTATTTAATTAGTTTTTTCTGT
GGTATTGGTTTGAGTCGTTATGTAACTCGAATGTTAGGGGTTAAGTCTTGGTTAAAACAATTAGTTTTATTGGCTTATAT
GGCTAATGATACTCGGAAAATTATCTGTCATTTACTTAAATATAATTTAAAGTTAGGAACAGATCTAGTAGCAGCTTGTG
AATTAGAGTTATATATTAATAGTTTAATTAGTCCTTTTTATCTGTGGAAAAATGGTTATTTCGCAGATTTAGAAAAAAAT
CAATATTAA

Upstream 100 bases:

>100_bases
GCTCTATATTGAATTAGTAGTTTACGAAAATATACTATTATTGTATTAGTTTAATAGGTTTTCAATGATACAATTACTTA
AATATTGAAAATAGACAATT

Downstream 100 bases:

>100_bases
GCCATAGCATCTAGGGTAGTTTGAATGAAATTACTCAAATACAAATATTAGTTAATTTAAATTTAGATGAAAGTTATTGC
TTGGCCAGCATTTAAAACGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Family Glycosyltransferase; B-Glycosyltransferase; Succinoglycan Biosynthesis Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MIDFTIAIPTYNGAEKLPLVLEKLNSQINTEKLSWEVIVVDNNSQDNTEQVIREYQKNWHQENRLKYFFEEKQGAGFARK
KAVQVAISPLIGFLDDDNIPAENWVAAAYEFAQKYPKAGAYASQIHGDFEGKLPPNFNRIQPFFAITERGGKPLLYKPKS
KVIPPSAGLVIRKKAWLESVPKHCILSGRKPGSMLTGEDTETIGYIQQAGWEIWYNPSMEVTHKIPKNRLEKDYLISFFC
GIGLSRYVTRMLGVKSWLKQLVLLAYMANDTRKIICHLLKYNLKLGTDLVAACELELYINSLISPFYLWKNGYFADLEKN
QY

Sequences:

>Translated_322_residues
MIDFTIAIPTYNGAEKLPLVLEKLNSQINTEKLSWEVIVVDNNSQDNTEQVIREYQKNWHQENRLKYFFEEKQGAGFARK
KAVQVAISPLIGFLDDDNIPAENWVAAAYEFAQKYPKAGAYASQIHGDFEGKLPPNFNRIQPFFAITERGGKPLLYKPKS
KVIPPSAGLVIRKKAWLESVPKHCILSGRKPGSMLTGEDTETIGYIQQAGWEIWYNPSMEVTHKIPKNRLEKDYLISFFC
GIGLSRYVTRMLGVKSWLKQLVLLAYMANDTRKIICHLLKYNLKLGTDLVAACELELYINSLISPFYLWKNGYFADLEKN
QY
>Mature_322_residues
MIDFTIAIPTYNGAEKLPLVLEKLNSQINTEKLSWEVIVVDNNSQDNTEQVIREYQKNWHQENRLKYFFEEKQGAGFARK
KAVQVAISPLIGFLDDDNIPAENWVAAAYEFAQKYPKAGAYASQIHGDFEGKLPPNFNRIQPFFAITERGGKPLLYKPKS
KVIPPSAGLVIRKKAWLESVPKHCILSGRKPGSMLTGEDTETIGYIQQAGWEIWYNPSMEVTHKIPKNRLEKDYLISFFC
GIGLSRYVTRMLGVKSWLKQLVLLAYMANDTRKIICHLLKYNLKLGTDLVAACELELYINSLISPFYLWKNGYFADLEKN
QY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36898; Mature: 36898

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFTIAIPTYNGAEKLPLVLEKLNSQINTEKLSWEVIVVDNNSQDNTEQVIREYQKNWH
CEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHC
QENRLKYFFEEKQGAGFARKKAVQVAISPLIGFLDDDNIPAENWVAAAYEFAQKYPKAGA
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
YASQIHGDFEGKLPPNFNRIQPFFAITERGGKPLLYKPKSKVIPPSAGLVIRKKAWLESV
HHHHHCCCCCCCCCCCCCCCCHHEEEECCCCCCEEECCCCCCCCCCCCEEEEHHHHHHHC
PKHCILSGRKPGSMLTGEDTETIGYIQQAGWEIWYNPSMEVTHKIPKNRLEKDYLISFFC
CHHHEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHCCHHHCCHHHHHHHHH
GIGLSRYVTRMLGVKSWLKQLVLLAYMANDTRKIICHLLKYNLKLGTDLVAACELELYIN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SLISPFYLWKNGYFADLEKNQY
HHHHHHHHCCCCEEECCCCCCC
>Mature Secondary Structure
MIDFTIAIPTYNGAEKLPLVLEKLNSQINTEKLSWEVIVVDNNSQDNTEQVIREYQKNWH
CEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHC
QENRLKYFFEEKQGAGFARKKAVQVAISPLIGFLDDDNIPAENWVAAAYEFAQKYPKAGA
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
YASQIHGDFEGKLPPNFNRIQPFFAITERGGKPLLYKPKSKVIPPSAGLVIRKKAWLESV
HHHHHCCCCCCCCCCCCCCCCHHEEEECCCCCCEEECCCCCCCCCCCCEEEEHHHHHHHC
PKHCILSGRKPGSMLTGEDTETIGYIQQAGWEIWYNPSMEVTHKIPKNRLEKDYLISFFC
CHHHEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHCCHHHCCHHHHHHHHH
GIGLSRYVTRMLGVKSWLKQLVLLAYMANDTRKIICHLLKYNLKLGTDLVAACELELYIN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SLISPFYLWKNGYFADLEKNQY
HHHHHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA