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The map label for this gene is 113477523

Identifier: 113477523

GI number: 113477523

Start: 6329323

End: 6330942

Strand: Reverse

Name: 113477523

Synonym: Tery_4103

Alternate gene names: NA

Gene position: 6330942-6329323 (Counterclockwise)

Preceding gene: 113477531

Following gene: 113477521

Centisome position: 81.69

GC content: 37.72

Gene sequence:

>1620_bases
GTGATAAATTTAGAATGTTTAGCTTACAGTGTAGGTCACGCAGATGATGGAATATGTCTGCTAGTTCGCATTGGAATACA
CCGGATTTTATTAGATTGTGGTATTACAAATATTTCATTATTAACTAATGAAACAAAACAACAACTACCTGCTGATATTG
TATTGTGTTCCCACGCACATTCAGATCATGCTCAAGGACTATTAGCACTTCACCGAAGCTTTCCAGATCTGCCAATATAT
GCTAGCGAGGCAACAACTAAACTTCTACCTCTAAATTGGCCAGAACTTACTATTTGTGAAGTCCCTGATTTTTGTCAACC
TCTACCTTGGCACTCACCAATAGAACTTTGTAGTGGTCTAACTGTAGAGCTTTTTCCTGCTGGTCATTTACCAGGGGCAA
CAGCTTTTCTACTCACCTATACTCAAGGAAATCGAACCTATAAGCTTTTATACACGGGAGATTTCTTTTTATCTAAAAGC
CGTTTAGTTGAAGGTCTCCCTTTAGCATACTTACGAGGACTCAAGCTAGATGTATTAATAGTTGAAGGTAGCTATGGCAC
AGCCCATTATCCACATAGGCGACAATTAGAAAACAACCTTGCAGAAAGGATATATGAAGCTATTGCTTTTGGAACTTCAG
TTATCTTGCCCACTCCCCCTTTAGGGTTAGGGCAAGAATTGTTAATGCTTCTACGCAGTCATCATTATTTCACAGGTCGC
GATCTGGATATTTGGGTAGAGGAAAAGGTGGCTAGAGGTTGTGACCTTTATTTACAACTATTGCCCCAATTTCCCACAAC
TGTACAAAATTTTGCTCAACATCAACCTCTATTTTGGGATGAAAAAGTCAAACCACGTGTACTGAGGCGATCGCCCGGAA
AATTGCCAGACAAAGAATTACCTTATATCCTTATTGCAGACAAGGATACTGATTTGAGACAATACATTATTAATCAAGAT
AATTCTGTTCTTATCTTACTGCCGGAACAACCAGGAAAAACATCACAGGAATTAGATTTTGCTTATACTGAAACATACCT
TCTCACTGATCATTGTGATGGACTTGGTACAACACAGTTAATTCATAACTTACGTCCTCAACATGTCATTTTTGTTAATG
GCTCTCCTAGTTATTTAGCTGACTTAACTAACCTTGAAGAGTTACGCAACCGTTATCAATTACACTCTCCAGCTAATGGT
ACATTAGTAGATTTACCAATAGGTGAGACGTTTATAGTACCTACATCACTAGAAACTAATTATGAAGGGGAATTAAATGA
ATTAAACACAGAGGTAATAATTTCTTTACCTCAAAGCATTACAAATGATAGTCGTTGGTCAACTTTCTCTGATACAGGTC
TTGTAGAAGTTCGTTGGCAAGGAGAAGAGCTAGTTGTTAGAGGAATATCTCAACGAGAACTTCTTAGTCAAACCACTGAC
CGCTTGAGCTCTCCTGATTTAAATTGTTGTGGTAATTGTTTACATTACCGAGGACAACGTTGTTCTAATCCTGTTTCAGC
TTTATATGGCTTTAAGGTAACATTTGATGGATATTGTCCCATGTTTGAGTCAGTTCATTTTCATTTTCCTTCTACTGAAG
AAACAGATAAAACTAACTAG

Upstream 100 bases:

>100_bases
TTTATATGGTATTTTCGTTCATATTTCTTAAGTTTAATATATCCAAAAATTCAATTTTATTAATAGTTAAAGTTTTCCTA
GACGCAAGCAGTTTAACCTT

Downstream 100 bases:

>100_bases
TTAGGGTTTGCTGAAAAAGTTTAATAGTGAAGCCAGAGAATTAGGGGACAACAATCTAATTTACTGATTCTTATATGTAG
TGTTTTTCAAATTAAATAAA

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MINLECLAYSVGHADDGICLLVRIGIHRILLDCGITNISLLTNETKQQLPADIVLCSHAHSDHAQGLLALHRSFPDLPIY
ASEATTKLLPLNWPELTICEVPDFCQPLPWHSPIELCSGLTVELFPAGHLPGATAFLLTYTQGNRTYKLLYTGDFFLSKS
RLVEGLPLAYLRGLKLDVLIVEGSYGTAHYPHRRQLENNLAERIYEAIAFGTSVILPTPPLGLGQELLMLLRSHHYFTGR
DLDIWVEEKVARGCDLYLQLLPQFPTTVQNFAQHQPLFWDEKVKPRVLRRSPGKLPDKELPYILIADKDTDLRQYIINQD
NSVLILLPEQPGKTSQELDFAYTETYLLTDHCDGLGTTQLIHNLRPQHVIFVNGSPSYLADLTNLEELRNRYQLHSPANG
TLVDLPIGETFIVPTSLETNYEGELNELNTEVIISLPQSITNDSRWSTFSDTGLVEVRWQGEELVVRGISQRELLSQTTD
RLSSPDLNCCGNCLHYRGQRCSNPVSALYGFKVTFDGYCPMFESVHFHFPSTEETDKTN

Sequences:

>Translated_539_residues
MINLECLAYSVGHADDGICLLVRIGIHRILLDCGITNISLLTNETKQQLPADIVLCSHAHSDHAQGLLALHRSFPDLPIY
ASEATTKLLPLNWPELTICEVPDFCQPLPWHSPIELCSGLTVELFPAGHLPGATAFLLTYTQGNRTYKLLYTGDFFLSKS
RLVEGLPLAYLRGLKLDVLIVEGSYGTAHYPHRRQLENNLAERIYEAIAFGTSVILPTPPLGLGQELLMLLRSHHYFTGR
DLDIWVEEKVARGCDLYLQLLPQFPTTVQNFAQHQPLFWDEKVKPRVLRRSPGKLPDKELPYILIADKDTDLRQYIINQD
NSVLILLPEQPGKTSQELDFAYTETYLLTDHCDGLGTTQLIHNLRPQHVIFVNGSPSYLADLTNLEELRNRYQLHSPANG
TLVDLPIGETFIVPTSLETNYEGELNELNTEVIISLPQSITNDSRWSTFSDTGLVEVRWQGEELVVRGISQRELLSQTTD
RLSSPDLNCCGNCLHYRGQRCSNPVSALYGFKVTFDGYCPMFESVHFHFPSTEETDKTN
>Mature_539_residues
MINLECLAYSVGHADDGICLLVRIGIHRILLDCGITNISLLTNETKQQLPADIVLCSHAHSDHAQGLLALHRSFPDLPIY
ASEATTKLLPLNWPELTICEVPDFCQPLPWHSPIELCSGLTVELFPAGHLPGATAFLLTYTQGNRTYKLLYTGDFFLSKS
RLVEGLPLAYLRGLKLDVLIVEGSYGTAHYPHRRQLENNLAERIYEAIAFGTSVILPTPPLGLGQELLMLLRSHHYFTGR
DLDIWVEEKVARGCDLYLQLLPQFPTTVQNFAQHQPLFWDEKVKPRVLRRSPGKLPDKELPYILIADKDTDLRQYIINQD
NSVLILLPEQPGKTSQELDFAYTETYLLTDHCDGLGTTQLIHNLRPQHVIFVNGSPSYLADLTNLEELRNRYQLHSPANG
TLVDLPIGETFIVPTSLETNYEGELNELNTEVIISLPQSITNDSRWSTFSDTGLVEVRWQGEELVVRGISQRELLSQTTD
RLSSPDLNCCGNCLHYRGQRCSNPVSALYGFKVTFDGYCPMFESVHFHFPSTEETDKTN

Specific function: Unknown

COG id: COG1236

COG function: function code J; Predicted exonuclease of the beta-lactamase fold involved in RNA processing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0047, MJ0162 and MJ1236 [H]

Homologues:

Organism=Homo sapiens, GI33300633, Length=450, Percent_Identity=22.2222222222222, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI7706427, Length=445, Percent_Identity=24.0449438202247, Blast_Score=87, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6323307, Length=515, Percent_Identity=22.5242718446602, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI21358523, Length=466, Percent_Identity=22.1030042918455, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24648013, Length=442, Percent_Identity=22.8506787330317, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 60740; Mature: 60740

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS00380 RHODANESE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLECLAYSVGHADDGICLLVRIGIHRILLDCGITNISLLTNETKQQLPADIVLCSHAH
CEEEEEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCHHHHCCCEEEEEECCC
SDHAQGLLALHRSFPDLPIYASEATTKLLPLNWPELTICEVPDFCQPLPWHSPIELCSGL
CCHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCEEEECCCHHHCCCCCCCHHHHHCCC
TVELFPAGHLPGATAFLLTYTQGNRTYKLLYTGDFFLSKSRLVEGLPLAYLRGLKLDVLI
EEEEEECCCCCCCEEEEEEEECCCEEEEEEEECCHHEEHHHHHCCCCHHHHCCCEEEEEE
VEGSYGTAHYPHRRQLENNLAERIYEAIAFGTSVILPTPPLGLGQELLMLLRSHHYFTGR
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCC
DLDIWVEEKVARGCDLYLQLLPQFPTTVQNFAQHQPLFWDEKVKPRVLRRSPGKLPDKEL
CEEEEEHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC
PYILIADKDTDLRQYIINQDNSVLILLPEQPGKTSQELDFAYTETYLLTDHCDGLGTTQL
CEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHH
IHNLRPQHVIFVNGSPSYLADLTNLEELRNRYQLHSPANGTLVDLPIGETFIVPTSLETN
HHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCEEEEECCCCCC
YEGELNELNTEVIISLPQSITNDSRWSTFSDTGLVEVRWQGEELVVRGISQRELLSQTTD
CCCCHHHCCCEEEEECCHHHCCCCCCCEECCCCEEEEEECCCCEEEECCCHHHHHHHHHH
RLSSPDLNCCGNCLHYRGQRCSNPVSALYGFKVTFDGYCPMFESVHFHFPSTEETDKTN
HCCCCCHHHHHHHHHHCCCCCCCCHHHHEEEEEEECCCCCHHHCEEEECCCCCCCCCCC
>Mature Secondary Structure
MINLECLAYSVGHADDGICLLVRIGIHRILLDCGITNISLLTNETKQQLPADIVLCSHAH
CEEEEEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCHHHHCCCEEEEEECCC
SDHAQGLLALHRSFPDLPIYASEATTKLLPLNWPELTICEVPDFCQPLPWHSPIELCSGL
CCHHHHHHHHHHCCCCCCEEECCCCCEEEECCCCCEEEECCCHHHCCCCCCCHHHHHCCC
TVELFPAGHLPGATAFLLTYTQGNRTYKLLYTGDFFLSKSRLVEGLPLAYLRGLKLDVLI
EEEEEECCCCCCCEEEEEEEECCCEEEEEEEECCHHEEHHHHHCCCCHHHHCCCEEEEEE
VEGSYGTAHYPHRRQLENNLAERIYEAIAFGTSVILPTPPLGLGQELLMLLRSHHYFTGR
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCC
DLDIWVEEKVARGCDLYLQLLPQFPTTVQNFAQHQPLFWDEKVKPRVLRRSPGKLPDKEL
CEEEEEHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC
PYILIADKDTDLRQYIINQDNSVLILLPEQPGKTSQELDFAYTETYLLTDHCDGLGTTQL
CEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCHHHH
IHNLRPQHVIFVNGSPSYLADLTNLEELRNRYQLHSPANGTLVDLPIGETFIVPTSLETN
HHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCEEEEECCCCCC
YEGELNELNTEVIISLPQSITNDSRWSTFSDTGLVEVRWQGEELVVRGISQRELLSQTTD
CCCCHHHCCCEEEEECCHHHCCCCCCCEECCCCEEEEEECCCCEEEECCCHHHHHHHHHH
RLSSPDLNCCGNCLHYRGQRCSNPVSALYGFKVTFDGYCPMFESVHFHFPSTEETDKTN
HCCCCCHHHHHHHHHHCCCCCCCCHHHHEEEEEEECCCCCHHHCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]