| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is fbaA [H]
Identifier: 113477519
GI number: 113477519
Start: 6321624
End: 6322703
Strand: Reverse
Name: fbaA [H]
Synonym: Tery_4099
Alternate gene names: 113477519
Gene position: 6322703-6321624 (Counterclockwise)
Preceding gene: 113477521
Following gene: 113477516
Centisome position: 81.58
GC content: 41.67
Gene sequence:
>1080_bases ATGGCTATTGTACCAATGCGTTTACTACTAGACCACGCAGCAGAAAACGGTTATGGCATCCCTGCATATAATGTCAACAA CATGGAGCAAATTCAGTCCATTATGCAGGCCGCAGAGGAAGCAGACAGCCCTGTAATTCTCCAAGCTTCTCGTGGAGCTC GCAAATATGCTGGTGAAAATTTCCTACGTCACTTAATTTTGGCTGCAGTAGAGACTTACCCTCATCTTCCCATTGCTATG CACCAGGATCATGGTAATGCACCCTCTACTTGCTATTCTGCTATGCGCCATGGTTTCACTAGCGTAATGATGGATGGTTC TCTAGAGGCAGACGGTAAAACTCCAGCTAGCTTTGAATATAATGTTAATGTTACTAGTGAAGTAGTTAAAGTTGCTCACT CCATTGGAGTAAGTGTAGAAGGTGAGTTAGGTTGTTTAGGTTCCTTGGAAACTGGTATGGGAGATAAGGAAGATGGTCAT GGAGCAGAAGGTAAGCTTTCCCACGACCAACTTTTAACAGATCCAGATGAAGCTGTTCAATTTGTAGAACAAACCCAAGT AGATGCTCTAGCAGTTGCTATTGGTACTAGCCATGGAGCTTACAAGTTTACCCGTAAACCTACAGGAGAAATTTTAGCTA TTAGCCGAATTGAAGAAATTCATCGTCGCTTACCTAATACTCACTTAGTGATGCACGGGTCTTCTTCTGTACCTGAAGAT TTGTTGGCAATTATTAACGAGTATGGTGGTAAGATTCCAGAAACTTACGGTGTGCCTGTTGAAGAAATTCAAAAAGGAAT CAAGAGTGGTGTTCGTAAGGTGAATATTGATACTGATAATCGCTTGGCCATTACTGCTGCTATTCGTGAAGCTGCTGCTA AAGATCCTTCTAACTTTGACCCTCGTCATTTCTTGAAGCCTTCTATCAAGTATATGAAGCAAGTATGTCTAGATCGTTAT CAACAGTTTGGTACTGCTGGTAATGCTAGTAAGATTAAGGTTCAAACTTTAGATGAGTTTGCTGATAGATATGCTCGTGG AGAATTAGCTGCTACTACTAAGACAGCAGTTGCAGTATAG
Upstream 100 bases:
>100_bases TCTTCAATTTGTCTTAATATTATCGTAAGAATTAAGCTTAGGTAAATCAAGTTACTAATAAGCTAATAATAATAACAAAA GGATATTAGGAGGAAAAGGT
Downstream 100 bases:
>100_bases TTTGTAGCAAAATTATAATTTTTATTCCAAGTTCTTAATTATCTAATTAATTTAATTAGTTGATCAGAAGTTCTTGAATT GATATCATCCCGACGCTGTT
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase; Fructose-bisphosphate aldolase class II [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MAIVPMRLLLDHAAENGYGIPAYNVNNMEQIQSIMQAAEEADSPVILQASRGARKYAGENFLRHLILAAVETYPHLPIAM HQDHGNAPSTCYSAMRHGFTSVMMDGSLEADGKTPASFEYNVNVTSEVVKVAHSIGVSVEGELGCLGSLETGMGDKEDGH GAEGKLSHDQLLTDPDEAVQFVEQTQVDALAVAIGTSHGAYKFTRKPTGEILAISRIEEIHRRLPNTHLVMHGSSSVPED LLAIINEYGGKIPETYGVPVEEIQKGIKSGVRKVNIDTDNRLAITAAIREAAAKDPSNFDPRHFLKPSIKYMKQVCLDRY QQFGTAGNASKIKVQTLDEFADRYARGELAATTKTAVAV
Sequences:
>Translated_359_residues MAIVPMRLLLDHAAENGYGIPAYNVNNMEQIQSIMQAAEEADSPVILQASRGARKYAGENFLRHLILAAVETYPHLPIAM HQDHGNAPSTCYSAMRHGFTSVMMDGSLEADGKTPASFEYNVNVTSEVVKVAHSIGVSVEGELGCLGSLETGMGDKEDGH GAEGKLSHDQLLTDPDEAVQFVEQTQVDALAVAIGTSHGAYKFTRKPTGEILAISRIEEIHRRLPNTHLVMHGSSSVPED LLAIINEYGGKIPETYGVPVEEIQKGIKSGVRKVNIDTDNRLAITAAIREAAAKDPSNFDPRHFLKPSIKYMKQVCLDRY QQFGTAGNASKIKVQTLDEFADRYARGELAATTKTAVAV >Mature_358_residues AIVPMRLLLDHAAENGYGIPAYNVNNMEQIQSIMQAAEEADSPVILQASRGARKYAGENFLRHLILAAVETYPHLPIAMH QDHGNAPSTCYSAMRHGFTSVMMDGSLEADGKTPASFEYNVNVTSEVVKVAHSIGVSVEGELGCLGSLETGMGDKEDGHG AEGKLSHDQLLTDPDEAVQFVEQTQVDALAVAIGTSHGAYKFTRKPTGEILAISRIEEIHRRLPNTHLVMHGSSSVPEDL LAIINEYGGKIPETYGVPVEEIQKGIKSGVRKVNIDTDNRLAITAAIREAAAKDPSNFDPRHFLKPSIKYMKQVCLDRYQ QFGTAGNASKIKVQTLDEFADRYARGELAATTKTAVAV
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=331, Percent_Identity=34.441087613293, Blast_Score=169, Evalue=2e-43, Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=32.5227963525836, Blast_Score=154, Evalue=9e-39, Organism=Escherichia coli, GI1788072, Length=329, Percent_Identity=29.483282674772, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1789293, Length=308, Percent_Identity=24.3506493506494, Blast_Score=71, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6322790, Length=322, Percent_Identity=26.3975155279503, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38956; Mature: 38824
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVPMRLLLDHAAENGYGIPAYNVNNMEQIQSIMQAAEEADSPVILQASRGARKYAGEN CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH FLRHLILAAVETYPHLPIAMHQDHGNAPSTCYSAMRHGFTSVMMDGSLEADGKTPASFEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCEEE NVNVTSEVVKVAHSIGVSVEGELGCLGSLETGMGDKEDGHGAEGKLSHDQLLTDPDEAVQ ECCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH FVEQTQVDALAVAIGTSHGAYKFTRKPTGEILAISRIEEIHRRLPNTHLVMHGSSSVPED HHHHHHHHHEEEEEECCCCCEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCHHH LLAIINEYGGKIPETYGVPVEEIQKGIKSGVRKVNIDTDNRLAITAAIREAAAKDPSNFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCEEHHHHHHHHHCCCCCCCC PRHFLKPSIKYMKQVCLDRYQQFGTAGNASKIKVQTLDEFADRYARGELAATTKTAVAV CHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCHHHCCHHHHCC >Mature Secondary Structure AIVPMRLLLDHAAENGYGIPAYNVNNMEQIQSIMQAAEEADSPVILQASRGARKYAGEN CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH FLRHLILAAVETYPHLPIAMHQDHGNAPSTCYSAMRHGFTSVMMDGSLEADGKTPASFEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCEEE NVNVTSEVVKVAHSIGVSVEGELGCLGSLETGMGDKEDGHGAEGKLSHDQLLTDPDEAVQ ECCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH FVEQTQVDALAVAIGTSHGAYKFTRKPTGEILAISRIEEIHRRLPNTHLVMHGSSSVPED HHHHHHHHHEEEEEECCCCCEEECCCCCCCEEHHHHHHHHHHHCCCCEEEEECCCCCHHH LLAIINEYGGKIPETYGVPVEEIQKGIKSGVRKVNIDTDNRLAITAAIREAAAKDPSNFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCEEHHHHHHHHHCCCCCCCC PRHFLKPSIKYMKQVCLDRYQQFGTAGNASKIKVQTLDEFADRYARGELAATTKTAVAV CHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 9298645 [H]