Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477407

Identifier: 113477407

GI number: 113477407

Start: 6138841

End: 6139959

Strand: Reverse

Name: 113477407

Synonym: Tery_3970

Alternate gene names: NA

Gene position: 6139959-6138841 (Counterclockwise)

Preceding gene: 113477412

Following gene: 113477406

Centisome position: 79.22

GC content: 38.87

Gene sequence:

>1119_bases
ATGACTGAAACACCACAAAACTCACCTAACCAGGAACAACAATTAACAAATCTAGTAGATCCAGAAAACTTAATTGGTTT
GCTGCGTCGCAAAGAAGGTAGTTGGGTAGAATGGGGAAACGCTTGTGCTGCTCTACAAAAAGCTGGATATACTTCTCAGA
ACATTTTTGAGGAAACAGGGTTTGAACCGATACACCAAAATCAGGTGATAGTCGGGTCTCAAGTATATGCAAGTCTTGTC
AATGCTGACATTAAAAAAAATGTTCTCAAACTAAGCAAAGCTGATATTTTATCACGCTTTGAGAGAACAGGTAGTGATAT
TCTTTACGAGTTGAGGGTTTTAAGTCAGGAACAAAGAATCATTGCAAGTGAGTTTATAGTTGCTCACGATCTTGATGTTG
ATGATGTCAAAGATGTAGTAAAAGCGATCAAAGATTTTGCTCAGATGAAAACAATACCAGAAGGATTTTCTGATTCTCCT
GGAGATATAGTAGGGTATCAATGTTGGAAACAAGCTAGGCAACAAAGCGAGCTACAACATAGGTCTCGTCTGATTGCTAA
AGGTCTAAAATTGGTGGATTCTCAAACAGCTAGAAAACAGCTTGAAGAACTATTAACTGATTTTACTGTTGTTTCTCAAA
GACCTGCTCCCCGTCTGCCAGTTTATCGACTAGAGTTAGAAGAAGATTTACCTCGCATTTTACCTGTGATCGGAAAATTA
CCGCTGAAGACAGAAGATTTTAAGGCAGTACCTCTTGTGGAAGAAGTCGAACCATTTAGAATGGTTAAATTTTCTGGTGG
AGCAGGTGCTTGGGTAGCGATACCTGGATGGCAAGTTGTCATCCATGCGGTTGATCCAGTGGCGATAATTGAAAATAGCG
ATCGCTTGCCTACTCCTATACCAGGTGCTACTGAGGAAGTTTTATTGATTATAGATAGAAGTCAACGTCAATGGAATAAA
GATGGTTATTTTATTGTAGACCAAGGGGGTAAAATAATCATGCAGTGGTTTGATGAGGAGCCTAATGTACCGTTGCTTGG
ACGAGCTTTGTTAATCTTAAGACCTAAAAAGATTCTTGATGAAGAGCTTATTAAAGACTTATGGCAAATTGAAGAATAG

Upstream 100 bases:

>100_bases
TACTGAAGTTGATTTTTCTCATCCCCTTAAATAGGGAAAGCTATTAACCTGATTTTTTTTGTCAAAAGTATATTCATTTG
TAAACAAAACATTCTAAATT

Downstream 100 bases:

>100_bases
TTATTTCAGTTATTAGTTATCAGTACCGATAGCTGAAGCTAGAGCCTAAAAATACTGAAACAGAAACGGGGTTTGTATTA
GATTTCCTACCATACTGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTETPQNSPNQEQQLTNLVDPENLIGLLRRKEGSWVEWGNACAALQKAGYTSQNIFEETGFEPIHQNQVIVGSQVYASLV
NADIKKNVLKLSKADILSRFERTGSDILYELRVLSQEQRIIASEFIVAHDLDVDDVKDVVKAIKDFAQMKTIPEGFSDSP
GDIVGYQCWKQARQQSELQHRSRLIAKGLKLVDSQTARKQLEELLTDFTVVSQRPAPRLPVYRLELEEDLPRILPVIGKL
PLKTEDFKAVPLVEEVEPFRMVKFSGGAGAWVAIPGWQVVIHAVDPVAIIENSDRLPTPIPGATEEVLLIIDRSQRQWNK
DGYFIVDQGGKIIMQWFDEEPNVPLLGRALLILRPKKILDEELIKDLWQIEE

Sequences:

>Translated_372_residues
MTETPQNSPNQEQQLTNLVDPENLIGLLRRKEGSWVEWGNACAALQKAGYTSQNIFEETGFEPIHQNQVIVGSQVYASLV
NADIKKNVLKLSKADILSRFERTGSDILYELRVLSQEQRIIASEFIVAHDLDVDDVKDVVKAIKDFAQMKTIPEGFSDSP
GDIVGYQCWKQARQQSELQHRSRLIAKGLKLVDSQTARKQLEELLTDFTVVSQRPAPRLPVYRLELEEDLPRILPVIGKL
PLKTEDFKAVPLVEEVEPFRMVKFSGGAGAWVAIPGWQVVIHAVDPVAIIENSDRLPTPIPGATEEVLLIIDRSQRQWNK
DGYFIVDQGGKIIMQWFDEEPNVPLLGRALLILRPKKILDEELIKDLWQIEE
>Mature_371_residues
TETPQNSPNQEQQLTNLVDPENLIGLLRRKEGSWVEWGNACAALQKAGYTSQNIFEETGFEPIHQNQVIVGSQVYASLVN
ADIKKNVLKLSKADILSRFERTGSDILYELRVLSQEQRIIASEFIVAHDLDVDDVKDVVKAIKDFAQMKTIPEGFSDSPG
DIVGYQCWKQARQQSELQHRSRLIAKGLKLVDSQTARKQLEELLTDFTVVSQRPAPRLPVYRLELEEDLPRILPVIGKLP
LKTEDFKAVPLVEEVEPFRMVKFSGGAGAWVAIPGWQVVIHAVDPVAIIENSDRLPTPIPGATEEVLLIIDRSQRQWNKD
GYFIVDQGGKIIMQWFDEEPNVPLLGRALLILRPKKILDEELIKDLWQIEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42132; Mature: 42001

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETPQNSPNQEQQLTNLVDPENLIGLLRRKEGSWVEWGNACAALQKAGYTSQNIFEETG
CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCC
FEPIHQNQVIVGSQVYASLVNADIKKNVLKLSKADILSRFERTGSDILYELRVLSQEQRI
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IASEFIVAHDLDVDDVKDVVKAIKDFAQMKTIPEGFSDSPGDIVGYQCWKQARQQSELQH
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RSRLIAKGLKLVDSQTARKQLEELLTDFTVVSQRPAPRLPVYRLELEEDLPRILPVIGKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHCCC
PLKTEDFKAVPLVEEVEPFRMVKFSGGAGAWVAIPGWQVVIHAVDPVAIIENSDRLPTPI
CCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEEECCCEEEEEECCCEEEEECCCCCCCCC
PGATEEVLLIIDRSQRQWNKDGYFIVDQGGKIIMQWFDEEPNVPLLGRALLILRPKKILD
CCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHEECCHHHHH
EELIKDLWQIEE
HHHHHHHHCCCC
>Mature Secondary Structure 
TETPQNSPNQEQQLTNLVDPENLIGLLRRKEGSWVEWGNACAALQKAGYTSQNIFEETG
CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCC
FEPIHQNQVIVGSQVYASLVNADIKKNVLKLSKADILSRFERTGSDILYELRVLSQEQRI
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IASEFIVAHDLDVDDVKDVVKAIKDFAQMKTIPEGFSDSPGDIVGYQCWKQARQQSELQH
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RSRLIAKGLKLVDSQTARKQLEELLTDFTVVSQRPAPRLPVYRLELEEDLPRILPVIGKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHCCC
PLKTEDFKAVPLVEEVEPFRMVKFSGGAGAWVAIPGWQVVIHAVDPVAIIENSDRLPTPI
CCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEEECCCEEEEEECCCEEEEECCCCCCCCC
PGATEEVLLIIDRSQRQWNKDGYFIVDQGGKIIMQWFDEEPNVPLLGRALLILRPKKILD
CCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCCCCHHHHHHHEECCHHHHH
EELIKDLWQIEE
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA