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The map label for this gene is 113477406

Identifier: 113477406

GI number: 113477406

Start: 6136937

End: 6138085

Strand: Reverse

Name: 113477406

Synonym: Tery_3969

Alternate gene names: NA

Gene position: 6138085-6136937 (Counterclockwise)

Preceding gene: 113477407

Following gene: 113477404

Centisome position: 79.2

GC content: 29.85

Gene sequence:

>1149_bases
ATGACTATTCCTGAAATGAATTTGCCTTGGGTAGATTCTCCTTTTTTTGAACAAATTTTCAATCAGTTAAATTTAGACAA
TTATACTAGAGAAATTGTCAAACAATTTGCAGAACAAGGATATGTAATTATAGATGACTTAGGTATAGAAAATATTTCAG
AAATTGTAGATCGCATAGTTAAAGATTTAACTCCCATATATGGAGAAAAAGGGAAAGTAAAATCAGCTTGGATTTATAAT
GATAGAATTCAAGATGCTTGGACTTTTAATCAAGATGTTAAAAAAATTGCTACGGCTCCCCATATTATTAATCTATTAAA
AATACTTTATCAGCGAGAACCAATCCCTTTTCAAACTCTAAATTTCAGGTTTGGTACTGAACAATCTACTCATAGTGATA
GCATACATTTTAGTTCAGTTCCAGCTAGATTTATGTGTGGAGTTTGGGTGGCTTTGGAAGATATAGATGCTAATAATGGT
CCGCTGCATTATTATCCTGGGAGTCATAAATTACCAATTTTTGATTTAAATGATTTAGGAATTACAGGTAGTTATCAGAA
TAAACCTTATGATATTTATCCTGTATATGAAGAGTTTTTACAGTCATTAATTGAATACAATGGTTTAAAAAAAGTAGAAC
TTTATGTTAAGAAAGGTCAAGCTTTAATTTGGGCAGCAAATTTACTTCATGGAGGTAGTCCAGTTTTAGATAAAAATAGG
ACTAGATATAGTCAGGTGACACATTATTATTTTTCTGATTGTATGTATTATATTCCTTTGCTATCTGACCCATTTTTATG
TAGAGTTCATTTCAAGGAAGTTAAGAATATAATTACAGGAGAAGTAGTTAATCATGTTTATAATCAAGATAAAATAGAAA
TTAATCCAGAAGAATATGAGATAGAAAGATTAAAATATCAACTCTTACAATTTGAGGAGGAATTAGTAAAACTGCGACCT
ATAGCAATGGAGTCTCAGGATGAACTGAATGTTTTAAAACCTCAGCTTCAAACTGTTGAGTCAGAATTAGAAAAGTTACG
AAGTAGGCTATATGATTCTCAAGCAGAATTGGGGTTATTAAAATCTCAAAATCAGCTATTGGAGACAGAATTAAAAAGAT
TAAGAATTAAATTGTATCAGAATACTTGA

Upstream 100 bases:

>100_bases
TGAAGTTATTTTTTATCTCTATTTAACAATAACTCTATTGATAGCTTGCTGCTGACGTTCTATTATTAATAAATAATTGA
GCTAAACAAAATATAGAAAA

Downstream 100 bases:

>100_bases
TTCAAATTTATCGGATTAATTTTTAACTATTTTAGAGAATAAAAACTCAAAACAATGTCATAACTAAAATCTGGTAGGGG
CAACCCCCTACTCTGGTATT

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family; Phytanoyl-CoA Dioxygenase Family Protein

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MTIPEMNLPWVDSPFFEQIFNQLNLDNYTREIVKQFAEQGYVIIDDLGIENISEIVDRIVKDLTPIYGEKGKVKSAWIYN
DRIQDAWTFNQDVKKIATAPHIINLLKILYQREPIPFQTLNFRFGTEQSTHSDSIHFSSVPARFMCGVWVALEDIDANNG
PLHYYPGSHKLPIFDLNDLGITGSYQNKPYDIYPVYEEFLQSLIEYNGLKKVELYVKKGQALIWAANLLHGGSPVLDKNR
TRYSQVTHYYFSDCMYYIPLLSDPFLCRVHFKEVKNIITGEVVNHVYNQDKIEINPEEYEIERLKYQLLQFEEELVKLRP
IAMESQDELNVLKPQLQTVESELEKLRSRLYDSQAELGLLKSQNQLLETELKRLRIKLYQNT

Sequences:

>Translated_382_residues
MTIPEMNLPWVDSPFFEQIFNQLNLDNYTREIVKQFAEQGYVIIDDLGIENISEIVDRIVKDLTPIYGEKGKVKSAWIYN
DRIQDAWTFNQDVKKIATAPHIINLLKILYQREPIPFQTLNFRFGTEQSTHSDSIHFSSVPARFMCGVWVALEDIDANNG
PLHYYPGSHKLPIFDLNDLGITGSYQNKPYDIYPVYEEFLQSLIEYNGLKKVELYVKKGQALIWAANLLHGGSPVLDKNR
TRYSQVTHYYFSDCMYYIPLLSDPFLCRVHFKEVKNIITGEVVNHVYNQDKIEINPEEYEIERLKYQLLQFEEELVKLRP
IAMESQDELNVLKPQLQTVESELEKLRSRLYDSQAELGLLKSQNQLLETELKRLRIKLYQNT
>Mature_381_residues
TIPEMNLPWVDSPFFEQIFNQLNLDNYTREIVKQFAEQGYVIIDDLGIENISEIVDRIVKDLTPIYGEKGKVKSAWIYND
RIQDAWTFNQDVKKIATAPHIINLLKILYQREPIPFQTLNFRFGTEQSTHSDSIHFSSVPARFMCGVWVALEDIDANNGP
LHYYPGSHKLPIFDLNDLGITGSYQNKPYDIYPVYEEFLQSLIEYNGLKKVELYVKKGQALIWAANLLHGGSPVLDKNRT
RYSQVTHYYFSDCMYYIPLLSDPFLCRVHFKEVKNIITGEVVNHVYNQDKIEINPEEYEIERLKYQLLQFEEELVKLRPI
AMESQDELNVLKPQLQTVESELEKLRSRLYDSQAELGLLKSQNQLLETELKRLRIKLYQNT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44745; Mature: 44613

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPEMNLPWVDSPFFEQIFNQLNLDNYTREIVKQFAEQGYVIIDDLGIENISEIVDRIV
CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH
KDLTPIYGEKGKVKSAWIYNDRIQDAWTFNQDVKKIATAPHIINLLKILYQREPIPFQTL
HHHHHHCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEE
NFRFGTEQSTHSDSIHFSSVPARFMCGVWVALEDIDANNGPLHYYPGSHKLPIFDLNDLG
EEEECCCCCCCCCCEEECCCCHHHHHHHHHEEEECCCCCCCEEECCCCCCCEEEECCCCC
ITGSYQNKPYDIYPVYEEFLQSLIEYNGLKKVELYVKKGQALIWAANLLHGGSPVLDKNR
CCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEHHHCCCCCCCCCCC
TRYSQVTHYYFSDCMYYIPLLSDPFLCRVHFKEVKNIITGEVVNHVYNQDKIEINPEEYE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEECCHHHH
IERLKYQLLQFEEELVKLRPIAMESQDELNVLKPQLQTVESELEKLRSRLYDSQAELGLL
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KSQNQLLETELKRLRIKLYQNT
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIPEMNLPWVDSPFFEQIFNQLNLDNYTREIVKQFAEQGYVIIDDLGIENISEIVDRIV
CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHH
KDLTPIYGEKGKVKSAWIYNDRIQDAWTFNQDVKKIATAPHIINLLKILYQREPIPFQTL
HHHHHHCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEE
NFRFGTEQSTHSDSIHFSSVPARFMCGVWVALEDIDANNGPLHYYPGSHKLPIFDLNDLG
EEEECCCCCCCCCCEEECCCCHHHHHHHHHEEEECCCCCCCEEECCCCCCCEEEECCCCC
ITGSYQNKPYDIYPVYEEFLQSLIEYNGLKKVELYVKKGQALIWAANLLHGGSPVLDKNR
CCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEHHHCCCCCCCCCCC
TRYSQVTHYYFSDCMYYIPLLSDPFLCRVHFKEVKNIITGEVVNHVYNQDKIEINPEEYE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEECCHHHH
IERLKYQLLQFEEELVKLRPIAMESQDELNVLKPQLQTVESELEKLRSRLYDSQAELGLL
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KSQNQLLETELKRLRIKLYQNT
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA