Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477412

Identifier: 113477412

GI number: 113477412

Start: 6146335

End: 6146520

Strand: Reverse

Name: 113477412

Synonym: Tery_3975

Alternate gene names: NA

Gene position: 6146520-6146335 (Counterclockwise)

Preceding gene: 113477413

Following gene: 113477407

Centisome position: 79.31

GC content: 30.11

Gene sequence:

>186_bases
ATGAGTAATATTAATGTTACTTCAATTGAAGTTTGGGATAGTTTGAAGCAAGCGATAGCTTTAACTTCGGGCTTTAAGAG
ATGGCAATTAGAACATAAAGTTAATAGTAATGATCAGCAAAATATACTGTTAGATAGACAAGTTAGTTTATATTTACGAG
AAACTCTGGAAACACTAGCTTATTAA

Upstream 100 bases:

>100_bases
AAATGCTTGGTTTGTGGTTAGTGAGCTATCTTTAAATTAAAGAAAAAGTTGAAATATCAGCAATTTCTCAGAGTGTCCTT
CCGTAAATCAGGTAAATGTT

Downstream 100 bases:

>100_bases
AAAAAAGTAAGCTATGTTAAAGTTTTGTTAATTTATTTTTTAATTTTGGCATAATTATAAAGAGCAAATTCCAAAGTATG
TAAGGCATAAATATGTAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MSNINVTSIEVWDSLKQAIALTSGFKRWQLEHKVNSNDQQNILLDRQVSLYLRETLETLAY

Sequences:

>Translated_61_residues
MSNINVTSIEVWDSLKQAIALTSGFKRWQLEHKVNSNDQQNILLDRQVSLYLRETLETLAY
>Mature_60_residues
SNINVTSIEVWDSLKQAIALTSGFKRWQLEHKVNSNDQQNILLDRQVSLYLRETLETLAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7123; Mature: 6992

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNINVTSIEVWDSLKQAIALTSGFKRWQLEHKVNSNDQQNILLDRQVSLYLRETLETLA
CCCCCCHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHC
Y
C
>Mature Secondary Structure 
SNINVTSIEVWDSLKQAIALTSGFKRWQLEHKVNSNDQQNILLDRQVSLYLRETLETLA
CCCCCHHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA