Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477284

Identifier: 113477284

GI number: 113477284

Start: 5904039

End: 5905364

Strand: Reverse

Name: 113477284

Synonym: Tery_3829

Alternate gene names: NA

Gene position: 5905364-5904039 (Counterclockwise)

Preceding gene: 113477286

Following gene: 113477283

Centisome position: 76.2

GC content: 34.69

Gene sequence:

>1326_bases
ATGTCACGTTTAAATAGCCGAGCCTATAAACTATTAAAAGTAGAAGTTGACAAACGTGCCAAAGAAGATTTGGTTGGGGA
AGTGGGAAAAAAAATAGTAATGAAAAGACTGGATAAGTTACGATTTCAATCAGGAGAGACCCTAAAAGTAGAAGAATTAA
GTTATATAGTAAAAGACCAATTTCCTAATTTTAGTGACACAGTTATTCAGAAAGCAATTAAAATAAATAAGCAACCTAAA
ATATTAAGTAAAATTATGTGGATACCTGCTGCATTAGTGGGAATGGCAGGGATCGTTTGGGTAGCAAATTTACCCTATCC
CATGATTCGTAAACCTGTGTCTAGAGTAGCACCAATAGTTTTGCTACCAAGCTATATAAATATGGATTATAACTATAGAG
AAGCGATCGCTAATATTGAACAAGCAGATCAACTAATTAATAAAGCAACTTCCAGTGCAGATATTAATTTAGGCGCTAAT
AAAGTTGCTTTAGCACAGAAGCATCTTAATGAATTGCCAGTATGGTTTTTAGATTTTTATCCTAAAAGATATTGTACGTT
TTTCAGTTGTTCTTGGAAATTCACATTAGATGAATTTGAAACCGCAAGAAAACAGGTAGGGCGAATGCAGGCAAAGGTAT
TTCAAGAAAACAATGCTCAAACATTCTTAGCGGAGGCGGAACAAACAATTGCCACTGCTAAACAACAATATCTGGAAGCT
ACAACCTCAACAGAAAAACAGCAGGCGATCGCTAACTGGCAAAGTGGAATAGATAGGTTAGCACAAATTCCACCTACTAC
TGTTGCTAAAAAAATAGCACAACCACAATTAGCAGCAGCTAAACGAGATTTTGAGAAAGAGGTAGGTTTAGCAGATGGTA
ATAAACTCAGTTTCACTTTTATAGAAGTGGCAAAAAAATTTGGTTTAAAGGCGGCTGAAGCTGCTCAAAATGGACCCCAT
TCAGATCAACGATGGCAAGTAATAGTAGATTTATGGGAGCAAGCAATTAATCAATTACAGAAAATATCAGCAGATAATCC
TAGTTATTTGGCAGCTCAGAGCAAAATAGCAGAATATCAGCTTAACCTCGCTAATGTGAAAATGCGATTACAAGCAGAAA
GGGACTCAGGAACAGCTTTTAAGCGGGGTAAAGATTTAATTGCAGATTGGAAAAAGTCTGCAATTAATAATTCTGATCGA
GGTTTACTTGCTAGTAAGTTACAAGAAATTATTAATCAGTTAGAAAATGTAAAACCAGAAACAACTTTTTATCAACAAGC
TCAAGAATTATTGAAATTTGCAAAAGATAAACAGAAAAATTTATAA

Upstream 100 bases:

>100_bases
AGGCAAACATTGGGTATATCTCCTATTATATGAAATTGGATATTTAACTGATGAGTCATCAAAATGTTACAATATAAGTA
ATAAATCTAGAGGTAAAAAT

Downstream 100 bases:

>100_bases
CTTGAAATTAGGAGATAAAATAGGGATTTTGGCAAGGATGTAGGGATTAACTTCTTAGCTCTAAATATTTAGGTGAGAGA
TACTTGTAAATCTTCTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSRLNSRAYKLLKVEVDKRAKEDLVGEVGKKIVMKRLDKLRFQSGETLKVEELSYIVKDQFPNFSDTVIQKAIKINKQPK
ILSKIMWIPAALVGMAGIVWVANLPYPMIRKPVSRVAPIVLLPSYINMDYNYREAIANIEQADQLINKATSSADINLGAN
KVALAQKHLNELPVWFLDFYPKRYCTFFSCSWKFTLDEFETARKQVGRMQAKVFQENNAQTFLAEAEQTIATAKQQYLEA
TTSTEKQQAIANWQSGIDRLAQIPPTTVAKKIAQPQLAAAKRDFEKEVGLADGNKLSFTFIEVAKKFGLKAAEAAQNGPH
SDQRWQVIVDLWEQAINQLQKISADNPSYLAAQSKIAEYQLNLANVKMRLQAERDSGTAFKRGKDLIADWKKSAINNSDR
GLLASKLQEIINQLENVKPETTFYQQAQELLKFAKDKQKNL

Sequences:

>Translated_441_residues
MSRLNSRAYKLLKVEVDKRAKEDLVGEVGKKIVMKRLDKLRFQSGETLKVEELSYIVKDQFPNFSDTVIQKAIKINKQPK
ILSKIMWIPAALVGMAGIVWVANLPYPMIRKPVSRVAPIVLLPSYINMDYNYREAIANIEQADQLINKATSSADINLGAN
KVALAQKHLNELPVWFLDFYPKRYCTFFSCSWKFTLDEFETARKQVGRMQAKVFQENNAQTFLAEAEQTIATAKQQYLEA
TTSTEKQQAIANWQSGIDRLAQIPPTTVAKKIAQPQLAAAKRDFEKEVGLADGNKLSFTFIEVAKKFGLKAAEAAQNGPH
SDQRWQVIVDLWEQAINQLQKISADNPSYLAAQSKIAEYQLNLANVKMRLQAERDSGTAFKRGKDLIADWKKSAINNSDR
GLLASKLQEIINQLENVKPETTFYQQAQELLKFAKDKQKNL
>Mature_440_residues
SRLNSRAYKLLKVEVDKRAKEDLVGEVGKKIVMKRLDKLRFQSGETLKVEELSYIVKDQFPNFSDTVIQKAIKINKQPKI
LSKIMWIPAALVGMAGIVWVANLPYPMIRKPVSRVAPIVLLPSYINMDYNYREAIANIEQADQLINKATSSADINLGANK
VALAQKHLNELPVWFLDFYPKRYCTFFSCSWKFTLDEFETARKQVGRMQAKVFQENNAQTFLAEAEQTIATAKQQYLEAT
TSTEKQQAIANWQSGIDRLAQIPPTTVAKKIAQPQLAAAKRDFEKEVGLADGNKLSFTFIEVAKKFGLKAAEAAQNGPHS
DQRWQVIVDLWEQAINQLQKISADNPSYLAAQSKIAEYQLNLANVKMRLQAERDSGTAFKRGKDLIADWKKSAINNSDRG
LLASKLQEIINQLENVKPETTFYQQAQELLKFAKDKQKNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49963; Mature: 49832

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLNSRAYKLLKVEVDKRAKEDLVGEVGKKIVMKRLDKLRFQSGETLKVEELSYIVKDQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHC
FPNFSDTVIQKAIKINKQPKILSKIMWIPAALVGMAGIVWVANLPYPMIRKPVSRVAPIV
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCE
LLPSYINMDYNYREAIANIEQADQLINKATSSADINLGANKVALAQKHLNELPVWFLDFY
EEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHC
PKRYCTFFSCSWKFTLDEFETARKQVGRMQAKVFQENNAQTFLAEAEQTIATAKQQYLEA
HHHHEEEEECEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TTSTEKQQAIANWQSGIDRLAQIPPTTVAKKIAQPQLAAAKRDFEKEVGLADGNKLSFTF
HCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEHHH
IEVAKKFGLKAAEAAQNGPHSDQRWQVIVDLWEQAINQLQKISADNPSYLAAQSKIAEYQ
HHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LNLANVKMRLQAERDSGTAFKRGKDLIADWKKSAINNSDRGLLASKLQEIINQLENVKPE
HHHHHEEEEEEECCCCCCHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
TTFYQQAQELLKFAKDKQKNL
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRLNSRAYKLLKVEVDKRAKEDLVGEVGKKIVMKRLDKLRFQSGETLKVEELSYIVKDQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHC
FPNFSDTVIQKAIKINKQPKILSKIMWIPAALVGMAGIVWVANLPYPMIRKPVSRVAPIV
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCE
LLPSYINMDYNYREAIANIEQADQLINKATSSADINLGANKVALAQKHLNELPVWFLDFY
EEHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHC
PKRYCTFFSCSWKFTLDEFETARKQVGRMQAKVFQENNAQTFLAEAEQTIATAKQQYLEA
HHHHEEEEECEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TTSTEKQQAIANWQSGIDRLAQIPPTTVAKKIAQPQLAAAKRDFEKEVGLADGNKLSFTF
HCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEHHH
IEVAKKFGLKAAEAAQNGPHSDQRWQVIVDLWEQAINQLQKISADNPSYLAAQSKIAEYQ
HHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LNLANVKMRLQAERDSGTAFKRGKDLIADWKKSAINNSDRGLLASKLQEIINQLENVKPE
HHHHHEEEEEEECCCCCCHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC
TTFYQQAQELLKFAKDKQKNL
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA