Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477244

Identifier: 113477244

GI number: 113477244

Start: 5817998

End: 5818210

Strand: Reverse

Name: 113477244

Synonym: Tery_3785

Alternate gene names: NA

Gene position: 5818210-5817998 (Counterclockwise)

Preceding gene: 113477252

Following gene: 113477243

Centisome position: 75.07

GC content: 28.64

Gene sequence:

>213_bases
ATGTTATGGAGTGAACAAAATAAACCAAAGGTGACAATCAATCAAATGGTGAACCGAATTATGACATCGGGTAAACTTAA
TCGTCAGGAACACTTACAACTTACTTCCTCAATTTTATCTGGCAAACAAATAACAGATGAAGAACGAAGCAAAATTAATC
AGATATTTGATTTGATTAAAATGGGTAAAATTAATTTAATTTATGATAATTAA

Upstream 100 bases:

>100_bases
GTACAACTACACTGGGGACTGTTATATTATTAACTTCATAGTACTTATATGTATTATTATACATACAGTAATAGATAAAA
AATTTATATACAAGTGATTT

Downstream 100 bases:

>100_bases
TATTTATCTTAATTTGATGAATAAATATACAATCTACAATTAAATTTGTGATTTGAGCTAATCTTTTGAAAGCATTTTTC
ATCTTTATCTATACTCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MLWSEQNKPKVTINQMVNRIMTSGKLNRQEHLQLTSSILSGKQITDEERSKINQIFDLIKMGKINLIYDN

Sequences:

>Translated_70_residues
MLWSEQNKPKVTINQMVNRIMTSGKLNRQEHLQLTSSILSGKQITDEERSKINQIFDLIKMGKINLIYDN
>Mature_70_residues
MLWSEQNKPKVTINQMVNRIMTSGKLNRQEHLQLTSSILSGKQITDEERSKINQIFDLIKMGKINLIYDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8176; Mature: 8176

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWSEQNKPKVTINQMVNRIMTSGKLNRQEHLQLTSSILSGKQITDEERSKINQIFDLIK
CCCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
MGKINLIYDN
CCCEEEEECC
>Mature Secondary Structure
MLWSEQNKPKVTINQMVNRIMTSGKLNRQEHLQLTSSILSGKQITDEERSKINQIFDLIK
CCCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
MGKINLIYDN
CCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA