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The map label for this gene is arnC [H]

Identifier: 113477243

GI number: 113477243

Start: 5816905

End: 5817705

Strand: Reverse

Name: arnC [H]

Synonym: Tery_3784

Alternate gene names: 113477243

Gene position: 5817705-5816905 (Counterclockwise)

Preceding gene: 113477244

Following gene: 113477242

Centisome position: 75.07

GC content: 36.83

Gene sequence:

>801_bases
ATGATAAGGAGTAAACCAAACTTATTACTAACAGTGCCAACTGGTTTATTAAAGGTTTCAACTATAGAAAATAAGACGAC
AAAACCAGGTAGCCCAGAAATTAAACTTTCTCTAGTTATTCCTACATATAAAGAAAGTCAAAATCTACCAACAATTGTTG
AAAAAATAACCATTATATTAGATACTAAAATTCCTAATGCTTATGAGTTAATCATAGTAGATGACAATAGCCCAGACTTA
ACCTGGGAGATAGCTCAGAACATGGCACGAGAATACCCCCAACTCCGGGTAATGTGTAGAAAAAAAGAAAGAGGACTTTC
TACCGCAGTGGTTCGTGGTTGGCAAGTAGCAAAAGGAGGAATATTAGGGGTTATTGATGCTGACTTACAACATCCTCTAG
AAACTCTTTTAAAACTATTAGCAGAAATGGAAAAAGGTTTTGATTTAGTAGTGGCTAGTCGTCATGTTGATGATGGAGGG
GTTAGTGACTGGAATATAGTTAGAAGATTTTTGTCTCGTGGGGCTCAACTTTTGGGATTAATTATTTTACCTGAAGTAAT
AGGGCGAGTCTCTGACCCCATGAGCGGCTACTTTATGGTCAATCGTCAGGCGATCGCTGGCCAAACTCTGAGCCCGGTAG
GATACAAAATCCTAATTGAAGTTTTAGGCCGAGGTAATATTTATTCTGTTTCAGAAGTAGGTTATGTTTTCCAAGAACGA
CTAGGAGGAGAAAGCAAAGTTACCTGGAAACAATATGTAGAATATTTACAACACTTATTAACTTTAAGATTTGTTAAATG
A

Upstream 100 bases:

>100_bases
ACATTAAAGTAAATATGAGGATTGAAGAGTCAAAAAAATCTTTATGTTTTTGATATTATTGACTAAAACTAAGCTAGGAA
AAATTAAATAAAATCAATTA

Downstream 100 bases:

>100_bases
CAAATTTAGATTTATCCAATTTGTTATGGAAAGAATTGAGAAGTATATTTGTTGATGTGGCAATATTTTATTTATTGCTT
GAGGTTTTAGGCTAGGGTCT

Product: dolichyl-phosphate beta-D-mannosyltransferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MIRSKPNLLLTVPTGLLKVSTIENKTTKPGSPEIKLSLVIPTYKESQNLPTIVEKITIILDTKIPNAYELIIVDDNSPDL
TWEIAQNMAREYPQLRVMCRKKERGLSTAVVRGWQVAKGGILGVIDADLQHPLETLLKLLAEMEKGFDLVVASRHVDDGG
VSDWNIVRRFLSRGAQLLGLIILPEVIGRVSDPMSGYFMVNRQAIAGQTLSPVGYKILIEVLGRGNIYSVSEVGYVFQER
LGGESKVTWKQYVEYLQHLLTLRFVK

Sequences:

>Translated_266_residues
MIRSKPNLLLTVPTGLLKVSTIENKTTKPGSPEIKLSLVIPTYKESQNLPTIVEKITIILDTKIPNAYELIIVDDNSPDL
TWEIAQNMAREYPQLRVMCRKKERGLSTAVVRGWQVAKGGILGVIDADLQHPLETLLKLLAEMEKGFDLVVASRHVDDGG
VSDWNIVRRFLSRGAQLLGLIILPEVIGRVSDPMSGYFMVNRQAIAGQTLSPVGYKILIEVLGRGNIYSVSEVGYVFQER
LGGESKVTWKQYVEYLQHLLTLRFVK
>Mature_266_residues
MIRSKPNLLLTVPTGLLKVSTIENKTTKPGSPEIKLSLVIPTYKESQNLPTIVEKITIILDTKIPNAYELIIVDDNSPDL
TWEIAQNMAREYPQLRVMCRKKERGLSTAVVRGWQVAKGGILGVIDADLQHPLETLLKLLAEMEKGFDLVVASRHVDDGG
VSDWNIVRRFLSRGAQLLGLIILPEVIGRVSDPMSGYFMVNRQAIAGQTLSPVGYKILIEVLGRGNIYSVSEVGYVFQER
LGGESKVTWKQYVEYLQHLLTLRFVK

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=236, Percent_Identity=33.0508474576271, Blast_Score=121, Evalue=8e-28,
Organism=Escherichia coli, GI1788588, Length=233, Percent_Identity=23.6051502145923, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71999402, Length=236, Percent_Identity=33.0508474576271, Blast_Score=111, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6325441, Length=242, Percent_Identity=33.0578512396694, Blast_Score=124, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24585265, Length=236, Percent_Identity=30.0847457627119, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24582769, Length=185, Percent_Identity=28.6486486486486, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 29755; Mature: 29755

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSKPNLLLTVPTGLLKVSTIENKTTKPGSPEIKLSLVIPTYKESQNLPTIVEKITIIL
CCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHEEEEE
DTKIPNAYELIIVDDNSPDLTWEIAQNMAREYPQLRVMCRKKERGLSTAVVRGWQVAKGG
ECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHCCEEECCCC
ILGVIDADLQHPLETLLKLLAEMEKGFDLVVASRHVDDGGVSDWNIVRRFLSRGAQLLGL
EEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHH
IILPEVIGRVSDPMSGYFMVNRQAIAGQTLSPVGYKILIEVLGRGNIYSVSEVGYVFQER
HHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHH
LGGESKVTWKQYVEYLQHLLTLRFVK
CCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSKPNLLLTVPTGLLKVSTIENKTTKPGSPEIKLSLVIPTYKESQNLPTIVEKITIIL
CCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHEEEEE
DTKIPNAYELIIVDDNSPDLTWEIAQNMAREYPQLRVMCRKKERGLSTAVVRGWQVAKGG
ECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHCCEEECCCC
ILGVIDADLQHPLETLLKLLAEMEKGFDLVVASRHVDDGGVSDWNIVRRFLSRGAQLLGL
EEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHH
IILPEVIGRVSDPMSGYFMVNRQAIAGQTLSPVGYKILIEVLGRGNIYSVSEVGYVFQER
HHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHH
LGGESKVTWKQYVEYLQHLLTLRFVK
CCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA