| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477242
Identifier: 113477242
GI number: 113477242
Start: 5815168
End: 5816352
Strand: Reverse
Name: 113477242
Synonym: Tery_3783
Alternate gene names: NA
Gene position: 5816352-5815168 (Counterclockwise)
Preceding gene: 113477243
Following gene: 113477241
Centisome position: 75.05
GC content: 34.51
Gene sequence:
>1185_bases GTGAAAATTTCTATAATAGCTAGCGACTTATCTAGCAATGGAGCAGGTAGATGGGGAGGGGCTGTCCGTCCCTTTTTATT ATCTCAAGCTCTAAAAAAGATTGGATGTGATGTAGAAATATTAGGCTTTGTTGATACAAGTTTACCCATAAGTATTAGTA CTAGTCAAACAGAAATCTCCATTGTTCCTATTTATACAAACTATACCAACAAATATTATCCAGGATTTTTACTTTCTGCT AAAAAATTATTAGAAAAAATTAGTGGAGATATTATTTATGCTTATAAACTTAAACCAAGTAGTCTTGGTTTAGCCCTAAT CAAAAAAATACAGACTAGTCGCCCAGTATTTTTAGATATTGATGATTGGGAGTTAAGTTGGCATGGAGGAGATAATTGGG AATATCGTCCCAGTATTAAACAGTTAGCTAGAGACATTTTGAAGCCAGAAGGAGCATTAAGACAACCAGACCATCCCTTC TATTTAAAATGGATTGAAAGTTTGGTCTCAAAATCAGACCAGGTTACTCTACACAATCAATTTCTCAAAAAACGTTTTGG TGGTATTTATTTACCAAATGGTAAGGATACAAATTTATTTGACCCTCATAAGTACGATCCAGAGGTAAGTAGAACTCATT ATGGCTTGGGTGGTTATAGAATTTTGATGTTTCCAGGAGCTCCCCGACCATATAAAGGAGTTGAGGATGTTTTAATGGCT TTAGATAAACTCAATCAGCCAGATTTAAGATTGGTAATTGTAGGTGGTAGTCCTTATGATGATTATGATCATCAATTAAA AGAAAAATGGGGACTCAGAATTATTCAAATGCCTAAGCATCCACCTACAGTCATGCCAGAAATTGTAGCTGCCGCCCATA TAATAGTGGTTCCTCAAAGAGATACTCCCGAAGCTAAGGCACAATTTCCATTAAAACTAACAGATGGCATGGCAATGTCT AAGCCAATTATAGCAACAAAAGTGGGTGATATTCCCGAAATTTTAGGTGATACTGGCTATTTGGTCGAACCTAGTTCTCC TGAACAAATAGCAGCACAAATTGAATTAATATTTAATGATTTAAAAGCAGCAAATTCTAAAGGTATTAAGGCTAGAGAAA GATGTATTAAATATTATAGTATTGATGCTATGGCTACTATTTTATCAGACTTAATCAAAGTTTAA
Upstream 100 bases:
>100_bases CTTCAGACAATATTACATATCTATTTTAAATGGCGATCGCTATTATATGTAGTTAGAATAATTATTCTATTAACCCATAA TTTGGAGGGTTAGAGGTTTG
Downstream 100 bases:
>100_bases ACAAGAGATATTAAAAATCGTAATAATTGAAAGAATATAATCTTAGAGGCTAGGAAAATATCAATGTCTGGAAAAGAATT TATATTAAAATTTATTCTTC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 1 Family Protein
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKISIIASDLSSNGAGRWGGAVRPFLLSQALKKIGCDVEILGFVDTSLPISISTSQTEISIVPIYTNYTNKYYPGFLLSA KKLLEKISGDIIYAYKLKPSSLGLALIKKIQTSRPVFLDIDDWELSWHGGDNWEYRPSIKQLARDILKPEGALRQPDHPF YLKWIESLVSKSDQVTLHNQFLKKRFGGIYLPNGKDTNLFDPHKYDPEVSRTHYGLGGYRILMFPGAPRPYKGVEDVLMA LDKLNQPDLRLVIVGGSPYDDYDHQLKEKWGLRIIQMPKHPPTVMPEIVAAAHIIVVPQRDTPEAKAQFPLKLTDGMAMS KPIIATKVGDIPEILGDTGYLVEPSSPEQIAAQIELIFNDLKAANSKGIKARERCIKYYSIDAMATILSDLIKV
Sequences:
>Translated_394_residues MKISIIASDLSSNGAGRWGGAVRPFLLSQALKKIGCDVEILGFVDTSLPISISTSQTEISIVPIYTNYTNKYYPGFLLSA KKLLEKISGDIIYAYKLKPSSLGLALIKKIQTSRPVFLDIDDWELSWHGGDNWEYRPSIKQLARDILKPEGALRQPDHPF YLKWIESLVSKSDQVTLHNQFLKKRFGGIYLPNGKDTNLFDPHKYDPEVSRTHYGLGGYRILMFPGAPRPYKGVEDVLMA LDKLNQPDLRLVIVGGSPYDDYDHQLKEKWGLRIIQMPKHPPTVMPEIVAAAHIIVVPQRDTPEAKAQFPLKLTDGMAMS KPIIATKVGDIPEILGDTGYLVEPSSPEQIAAQIELIFNDLKAANSKGIKARERCIKYYSIDAMATILSDLIKV >Mature_394_residues MKISIIASDLSSNGAGRWGGAVRPFLLSQALKKIGCDVEILGFVDTSLPISISTSQTEISIVPIYTNYTNKYYPGFLLSA KKLLEKISGDIIYAYKLKPSSLGLALIKKIQTSRPVFLDIDDWELSWHGGDNWEYRPSIKQLARDILKPEGALRQPDHPF YLKWIESLVSKSDQVTLHNQFLKKRFGGIYLPNGKDTNLFDPHKYDPEVSRTHYGLGGYRILMFPGAPRPYKGVEDVLMA LDKLNQPDLRLVIVGGSPYDDYDHQLKEKWGLRIIQMPKHPPTVMPEIVAAAHIIVVPQRDTPEAKAQFPLKLTDGMAMS KPIIATKVGDIPEILGDTGYLVEPSSPEQIAAQIELIFNDLKAANSKGIKARERCIKYYSIDAMATILSDLIKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44050; Mature: 44050
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISIIASDLSSNGAGRWGGAVRPFLLSQALKKIGCDVEILGFVDTSLPISISTSQTEIS CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCEEEE IVPIYTNYTNKYYPGFLLSAKKLLEKISGDIIYAYKLKPSSLGLALIKKIQTSRPVFLDI EEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEE DDWELSWHGGDNWEYRPSIKQLARDILKPEGALRQPDHPFYLKWIESLVSKSDQVTLHNQ CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHH FLKKRFGGIYLPNGKDTNLFDPHKYDPEVSRTHYGLGGYRILMFPGAPRPYKGVEDVLMA HHHHHHCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHH LDKLNQPDLRLVIVGGSPYDDYDHQLKEKWGLRIIQMPKHPPTVMPEIVAAAHIIVVPQR HHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCCCCHHHHHHHCEEEEEEECC DTPEAKAQFPLKLTDGMAMSKPIIATKVGDIPEILGDTGYLVEPSSPEQIAAQIELIFND CCCCCCCCCCEEECCCCCCCCCEEEECCCCCHHHHCCCCEEECCCCHHHHHHHHHHHHHH LKAANSKGIKARERCIKYYSIDAMATILSDLIKV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKISIIASDLSSNGAGRWGGAVRPFLLSQALKKIGCDVEILGFVDTSLPISISTSQTEIS CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCEEEE IVPIYTNYTNKYYPGFLLSAKKLLEKISGDIIYAYKLKPSSLGLALIKKIQTSRPVFLDI EEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEE DDWELSWHGGDNWEYRPSIKQLARDILKPEGALRQPDHPFYLKWIESLVSKSDQVTLHNQ CCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHH FLKKRFGGIYLPNGKDTNLFDPHKYDPEVSRTHYGLGGYRILMFPGAPRPYKGVEDVLMA HHHHHHCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCHHHHHHH LDKLNQPDLRLVIVGGSPYDDYDHQLKEKWGLRIIQMPKHPPTVMPEIVAAAHIIVVPQR HHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCCCCHHHHHHHCEEEEEEECC DTPEAKAQFPLKLTDGMAMSKPIIATKVGDIPEILGDTGYLVEPSSPEQIAAQIELIFND CCCCCCCCCCEEECCCCCCCCCEEEECCCCCHHHHCCCCEEECCCCHHHHHHHHHHHHHH LKAANSKGIKARERCIKYYSIDAMATILSDLIKV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA