Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477046

Identifier: 113477046

GI number: 113477046

Start: 5468356

End: 5468850

Strand: Reverse

Name: 113477046

Synonym: Tery_3548

Alternate gene names: NA

Gene position: 5468850-5468356 (Counterclockwise)

Preceding gene: 113477048

Following gene: 113477042

Centisome position: 70.56

GC content: 37.37

Gene sequence:

>495_bases
ATGTTAGCTTTTACAGGAGGGTTATTTGCCGGAATTTTCGGTATTTTTCCTTTTTCAAAAAAGTCAGAATATCTATTAGA
ATTTCAGGAAACAAAGGAAACCAATACCCCCAAAGAAGAATCAACTCAAACTACTGTAGCAGCAGCACCTACAGAGACAG
AAACCCCATCTGATAGTTCCGAAACTCCAAAAGAAGCAAAACCTGAAATTGCTGCTGCTACAAAAGAGGAAAAAAACCCA
GCAGCAAAAGCAGTAACAAAAGAAACTCAAGCTGCTAAAGAAGCCGAAAAAGTTGAATTACAAAAATCTACTACTCCTCA
AGTAGTAACACCAGAAACTCCGATCACAAATGGTACAACTTCCCAGAAACAAGAAGAGGTAGTATTATTTTCTCCTAACC
TTTTAATGTTGCAACTTCCAACCAAACGTCGTCGTCCTGGTCCTAGTATGAGTATGTTTCTTAATATAGCTAAGGGTATG
AATTTATCAAGATAG

Upstream 100 bases:

>100_bases
TAAGAAATATGAAGATAGGTTGTGCCAAGTCATCACTTAATCCTAAAGTATTAGATTGTAAGCAATACTACAAAAACAAT
TATTTTAGGAGAACACAATC

Downstream 100 bases:

>100_bases
TATTAGTAATAAAATTAATCAAGCAGTTAATCAATTATCTTTTAATCACCCTTGCACGAAGTCCTGTGCTCCCCTGAAAA
GGAGCATCTAATGGAGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MLAFTGGLFAGIFGIFPFSKKSEYLLEFQETKETNTPKEESTQTTVAAAPTETETPSDSSETPKEAKPEIAAATKEEKNP
AAKAVTKETQAAKEAEKVELQKSTTPQVVTPETPITNGTTSQKQEEVVLFSPNLLMLQLPTKRRRPGPSMSMFLNIAKGM
NLSR

Sequences:

>Translated_164_residues
MLAFTGGLFAGIFGIFPFSKKSEYLLEFQETKETNTPKEESTQTTVAAAPTETETPSDSSETPKEAKPEIAAATKEEKNP
AAKAVTKETQAAKEAEKVELQKSTTPQVVTPETPITNGTTSQKQEEVVLFSPNLLMLQLPTKRRRPGPSMSMFLNIAKGM
NLSR
>Mature_164_residues
MLAFTGGLFAGIFGIFPFSKKSEYLLEFQETKETNTPKEESTQTTVAAAPTETETPSDSSETPKEAKPEIAAATKEEKNP
AAKAVTKETQAAKEAEKVELQKSTTPQVVTPETPITNGTTSQKQEEVVLFSPNLLMLQLPTKRRRPGPSMSMFLNIAKGM
NLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17880; Mature: 17880

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFTGGLFAGIFGIFPFSKKSEYLLEFQETKETNTPKEESTQTTVAAAPTETETPSDSS
CCEECCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCC
ETPKEAKPEIAAATKEEKNPAAKAVTKETQAAKEAEKVELQKSTTPQVVTPETPITNGTT
CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCC
SQKQEEVVLFSPNLLMLQLPTKRRRPGPSMSMFLNIAKGMNLSR
CCCCCEEEEECCCEEEEECCHHHCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLAFTGGLFAGIFGIFPFSKKSEYLLEFQETKETNTPKEESTQTTVAAAPTETETPSDSS
CCEECCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCC
ETPKEAKPEIAAATKEEKNPAAKAVTKETQAAKEAEKVELQKSTTPQVVTPETPITNGTT
CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCC
SQKQEEVVLFSPNLLMLQLPTKRRRPGPSMSMFLNIAKGMNLSR
CCCCCEEEEECCCEEEEECCHHHCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA