Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477042

Identifier: 113477042

GI number: 113477042

Start: 5458898

End: 5459155

Strand: Reverse

Name: 113477042

Synonym: Tery_3543

Alternate gene names: NA

Gene position: 5459155-5458898 (Counterclockwise)

Preceding gene: 113477046

Following gene: 113477040

Centisome position: 70.44

GC content: 33.72

Gene sequence:

>258_bases
ATGCCTATTTCACTAATGTACGAAGAAGAAAACTATGTAGTCTTAGAGGCAAATAAACCTGAGCAATTTATGACTGCAGT
AGAACTACTAGAAAAATTGCGTGGTATTATAGCTACACAACAAGATAATTTACCTAGAGATTTACAAAAATTATCTTCCT
TAGATGATCAAGCTGAAAAATTAAGAGATACCTATTGTGAATATGAATTTACCCCTGGCAAATTCATACAATGGTACGTG
GTGCGTCTGGAAAAGTAG

Upstream 100 bases:

>100_bases
AAATTATAAATCCTGAATATTGAGTCCTGACTCCTGACTAGCACCAAAATATTACTGCCTAAATAGGGTTGCTTAGTAGC
TAATAAATTTTTCAATAAAA

Downstream 100 bases:

>100_bases
GTTTCACCATCCTAGTTCTTATGTAAAACCACAATAGGCTTCAGTGAAATATTTTTTTTGCATCTAATTATGAAAAGCTC
TAATTCTGCTTCCATGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MPISLMYEEENYVVLEANKPEQFMTAVELLEKLRGIIATQQDNLPRDLQKLSSLDDQAEKLRDTYCEYEFTPGKFIQWYV
VRLEK

Sequences:

>Translated_85_residues
MPISLMYEEENYVVLEANKPEQFMTAVELLEKLRGIIATQQDNLPRDLQKLSSLDDQAEKLRDTYCEYEFTPGKFIQWYV
VRLEK
>Mature_84_residues
PISLMYEEENYVVLEANKPEQFMTAVELLEKLRGIIATQQDNLPRDLQKLSSLDDQAEKLRDTYCEYEFTPGKFIQWYVV
RLEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10105; Mature: 9973

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISLMYEEENYVVLEANKPEQFMTAVELLEKLRGIIATQQDNLPRDLQKLSSLDDQAEK
CCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHH
LRDTYCEYEFTPGKFIQWYVVRLEK
HHHHHCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
PISLMYEEENYVVLEANKPEQFMTAVELLEKLRGIIATQQDNLPRDLQKLSSLDDQAEK
CCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHH
LRDTYCEYEFTPGKFIQWYVVRLEK
HHHHHCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA