Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113477042
Identifier: 113477042
GI number: 113477042
Start: 5458898
End: 5459155
Strand: Reverse
Name: 113477042
Synonym: Tery_3543
Alternate gene names: NA
Gene position: 5459155-5458898 (Counterclockwise)
Preceding gene: 113477046
Following gene: 113477040
Centisome position: 70.44
GC content: 33.72
Gene sequence:
>258_bases ATGCCTATTTCACTAATGTACGAAGAAGAAAACTATGTAGTCTTAGAGGCAAATAAACCTGAGCAATTTATGACTGCAGT AGAACTACTAGAAAAATTGCGTGGTATTATAGCTACACAACAAGATAATTTACCTAGAGATTTACAAAAATTATCTTCCT TAGATGATCAAGCTGAAAAATTAAGAGATACCTATTGTGAATATGAATTTACCCCTGGCAAATTCATACAATGGTACGTG GTGCGTCTGGAAAAGTAG
Upstream 100 bases:
>100_bases AAATTATAAATCCTGAATATTGAGTCCTGACTCCTGACTAGCACCAAAATATTACTGCCTAAATAGGGTTGCTTAGTAGC TAATAAATTTTTCAATAAAA
Downstream 100 bases:
>100_bases GTTTCACCATCCTAGTTCTTATGTAAAACCACAATAGGCTTCAGTGAAATATTTTTTTTGCATCTAATTATGAAAAGCTC TAATTCTGCTTCCATGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MPISLMYEEENYVVLEANKPEQFMTAVELLEKLRGIIATQQDNLPRDLQKLSSLDDQAEKLRDTYCEYEFTPGKFIQWYV VRLEK
Sequences:
>Translated_85_residues MPISLMYEEENYVVLEANKPEQFMTAVELLEKLRGIIATQQDNLPRDLQKLSSLDDQAEKLRDTYCEYEFTPGKFIQWYV VRLEK >Mature_84_residues PISLMYEEENYVVLEANKPEQFMTAVELLEKLRGIIATQQDNLPRDLQKLSSLDDQAEKLRDTYCEYEFTPGKFIQWYVV RLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10105; Mature: 9973
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISLMYEEENYVVLEANKPEQFMTAVELLEKLRGIIATQQDNLPRDLQKLSSLDDQAEK CCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHH LRDTYCEYEFTPGKFIQWYVVRLEK HHHHHCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure PISLMYEEENYVVLEANKPEQFMTAVELLEKLRGIIATQQDNLPRDLQKLSSLDDQAEK CCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHH LRDTYCEYEFTPGKFIQWYVVRLEK HHHHHCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA