Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477048

Identifier: 113477048

GI number: 113477048

Start: 5471840

End: 5472277

Strand: Reverse

Name: 113477048

Synonym: Tery_3551

Alternate gene names: NA

Gene position: 5472277-5471840 (Counterclockwise)

Preceding gene: 113477049

Following gene: 113477046

Centisome position: 70.61

GC content: 31.74

Gene sequence:

>438_bases
ATGAATCAAGTTCTTTTTCATTTAGCCTTTCCGGTGAATAATATTACCAAAACGAAAGAATTCTATAGCAATGGTTTAGG
TTGTAAAGTTGGGCGAGAATCTCGAAATTCAGTGATTTTAAATCTTTATGGTAATCAAATTGTTGCTCATATTGCTAAAG
AAACTTTAGAACCACAAAAAGGAATTTACCCCAGACATTTTGGTTTAGTTTTTAGCCTAGAAAGTGACTGGGAAGCTTTA
TTAGAACGTGCTCAAAAAAATAAATTAAAATTCTATCAGCAACCTAAGCGGAGGTTTACAAATTCTCCTTTGGAACATCG
TACTTTTTTCCTTGAAGATCCATTTTATAACTTGCTAGAATTCAAATATTATTGTCATCAAGAAGCTATTTTTGGCTGTA
ATGACCATAAAGAAGTTGGCGATATTATAGCAGTTTAA

Upstream 100 bases:

>100_bases
TATTAGATAACATTATATCTACTCGCTAAAAACATCTATTGTCATTTTAACTTAATATTTACCAGAGAAAATAATACTTA
CACATTACAAGGAAATAACT

Downstream 100 bases:

>100_bases
ATTATTTTTATATTCAATAATTAATTAAACATTGAGGTATTATAGCAATCCTATCTTAATTTGTGAAATAGATGACCGAC
TAGAAGGTAAAGTACTTATG

Product: glyoxalase/bleomycin resistance protein/dioxygenase

Products: NA

Alternate protein names: Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Dioxygenase; Extradiol Dioxygenase Family Protein; Dioxygenase/Glyoxalase; Glyoxalase Domain Protein; Glyoxalase/Bleomycin Resistance Family Protein; Dioxygenase Of Extradiol Dioxygenase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Extradiol Family Dioxygenase; Glyoxalase/Extradiol Ring-Cleavage Dioxygenase; Lactoylglutathione Lyase Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNQVLFHLAFPVNNITKTKEFYSNGLGCKVGRESRNSVILNLYGNQIVAHIAKETLEPQKGIYPRHFGLVFSLESDWEAL
LERAQKNKLKFYQQPKRRFTNSPLEHRTFFLEDPFYNLLEFKYYCHQEAIFGCNDHKEVGDIIAV

Sequences:

>Translated_145_residues
MNQVLFHLAFPVNNITKTKEFYSNGLGCKVGRESRNSVILNLYGNQIVAHIAKETLEPQKGIYPRHFGLVFSLESDWEAL
LERAQKNKLKFYQQPKRRFTNSPLEHRTFFLEDPFYNLLEFKYYCHQEAIFGCNDHKEVGDIIAV
>Mature_145_residues
MNQVLFHLAFPVNNITKTKEFYSNGLGCKVGRESRNSVILNLYGNQIVAHIAKETLEPQKGIYPRHFGLVFSLESDWEAL
LERAQKNKLKFYQQPKRRFTNSPLEHRTFFLEDPFYNLLEFKYYCHQEAIFGCNDHKEVGDIIAV

Specific function: Unknown

COG id: COG3565

COG function: function code R; Predicted dioxygenase of extradiol dioxygenase family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17002; Mature: 17002

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQVLFHLAFPVNNITKTKEFYSNGLGCKVGRESRNSVILNLYGNQIVAHIAKETLEPQK
CCCEEEEEECCCCCHHHHHHHHHCCCCCEECCCCCCCEEEEECCHHHHHHHHHHHCCCCC
GIYPRHFGLVFSLESDWEALLERAQKNKLKFYQQPKRRFTNSPLEHRTFFLEDPFYNLLE
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEECCCHHHHHH
FKYYCHQEAIFGCNDHKEVGDIIAV
HHHHHHHHHHCCCCCCHHHHHHHCC
>Mature Secondary Structure
MNQVLFHLAFPVNNITKTKEFYSNGLGCKVGRESRNSVILNLYGNQIVAHIAKETLEPQK
CCCEEEEEECCCCCHHHHHHHHHCCCCCEECCCCCCCEEEEECCHHHHHHHHHHHCCCCC
GIYPRHFGLVFSLESDWEALLERAQKNKLKFYQQPKRRFTNSPLEHRTFFLEDPFYNLLE
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCEEEECCCHHHHHH
FKYYCHQEAIFGCNDHKEVGDIIAV
HHHHHHHHHHCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA