Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113477040
Identifier: 113477040
GI number: 113477040
Start: 5456566
End: 5456736
Strand: Reverse
Name: 113477040
Synonym: Tery_3541
Alternate gene names: NA
Gene position: 5456736-5456566 (Counterclockwise)
Preceding gene: 113477042
Following gene: 113477035
Centisome position: 70.41
GC content: 34.5
Gene sequence:
>171_bases ATGGACTCACAAATCGTTAAAGTCAGACTGGCTAATATTGAAAGTAAACGGGAATCTCTAGTCAAACTACTAGAAAATCC TGATTTAGGGACTCTCAGAATTGATGTGAATCAAGCAATAGAGGAAATTGATGACTTGATTGATGAATTAAAGCGTACTT TTCCTGATTAA
Upstream 100 bases:
>100_bases TCAACGTATGAAAATTTAAAAAATTATAGTAACTGATATTATGTCCTGAAACCTTTATTGAGGACTAACAAATACTTTAT ATTATATTACGCATTTTCTT
Downstream 100 bases:
>100_bases TCTAGAATATAGATTGACTGGGTAATTGGGTTGAATGCTTCTGGAAGAGTTAAAAAATTTAACCCCCTCCAACTCTTACT GGAAGAGGAGCCTAATTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MDSQIVKVRLANIESKRESLVKLLENPDLGTLRIDVNQAIEEIDDLIDELKRTFPD
Sequences:
>Translated_56_residues MDSQIVKVRLANIESKRESLVKLLENPDLGTLRIDVNQAIEEIDDLIDELKRTFPD >Mature_56_residues MDSQIVKVRLANIESKRESLVKLLENPDLGTLRIDVNQAIEEIDDLIDELKRTFPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6450; Mature: 6450
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSQIVKVRLANIESKRESLVKLLENPDLGTLRIDVNQAIEEIDDLIDELKRTFPD CCCCHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDSQIVKVRLANIESKRESLVKLLENPDLGTLRIDVNQAIEEIDDLIDELKRTFPD CCCCHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA