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The map label for this gene is yjcF [C]

Identifier: 113477023

GI number: 113477023

Start: 5426895

End: 5427401

Strand: Reverse

Name: yjcF [C]

Synonym: Tery_3522

Alternate gene names: 113477023

Gene position: 5427401-5426895 (Counterclockwise)

Preceding gene: 113477026

Following gene: 113477021

Centisome position: 70.03

GC content: 33.53

Gene sequence:

>507_bases
ATGAGATTTGTATATCCATTGACAACTACATTATTAACAGTATTTTGGTTAACAATTCCAGTATTTGCTCAGTCTAAGTC
TAATTCTATGGAACGGATCAAAACTATTCAGCGTTTATTATCTACTTATGAATGTCCTAGTTGTGATTTGAGGGAAGCTG
ACTTAAGCGAAGCTGATTTAAGTGAAGCAAACTTACTAGGAGCTAATTTACAAAAAGCTAACTTAAAAAATACTAACTTG
CGAGGAGCAATTTTAAGCAGTGCAAATTTAATTGAGGCAAATTTAGCAGGAGCTAATTTATCAGGTGCAATTATGCACAG
TACAACTATGCGACTGGCTAATCTCAGAGATGCTGACTTATCTTGGGCTGACTTATACCAAGCATATCTTAAGCAGGCCA
AGTTAAATGGAGCTAATTTATATAATGCAAATCTTAATGAAGCTAAATTAGACCAGACTGATTTTTGTGACGCTACTTTA
CCTAATGGTAAAATCAAAAATTGTTAA

Upstream 100 bases:

>100_bases
TTTTCTTCACCAAAAATTTTTTTTTCGATCTAAATTTTATGATATGATAATGAATCTTAAGGTCTAATTATAATTTTATT
AATTTTCCCAACAGTAAAAT

Downstream 100 bases:

>100_bases
TCAAAATCAATGTTCAATAACTTAATTAGTGTAAAAGTGTAAAAATTTACTAATTTTTTAGGTATAAGCTAAAAGTCATG
TTTATTTTATATTTTCTGTT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRFVYPLTTTLLTVFWLTIPVFAQSKSNSMERIKTIQRLLSTYECPSCDLREADLSEADLSEANLLGANLQKANLKNTNL
RGAILSSANLIEANLAGANLSGAIMHSTTMRLANLRDADLSWADLYQAYLKQAKLNGANLYNANLNEAKLDQTDFCDATL
PNGKIKNC

Sequences:

>Translated_168_residues
MRFVYPLTTTLLTVFWLTIPVFAQSKSNSMERIKTIQRLLSTYECPSCDLREADLSEADLSEANLLGANLQKANLKNTNL
RGAILSSANLIEANLAGANLSGAIMHSTTMRLANLRDADLSWADLYQAYLKQAKLNGANLYNANLNEAKLDQTDFCDATL
PNGKIKNC
>Mature_168_residues
MRFVYPLTTTLLTVFWLTIPVFAQSKSNSMERIKTIQRLLSTYECPSCDLREADLSEADLSEANLLGANLQKANLKNTNL
RGAILSSANLIEANLAGANLSGAIMHSTTMRLANLRDADLSWADLYQAYLKQAKLNGANLYNANLNEAKLDQTDFCDATL
PNGKIKNC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 18504; Mature: 18504

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFVYPLTTTLLTVFWLTIPVFAQSKSNSMERIKTIQRLLSTYECPSCDLREADLSEADL
CCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SEANLLGANLQKANLKNTNLRGAILSSANLIEANLAGANLSGAIMHSTTMRLANLRDADL
CHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCC
SWADLYQAYLKQAKLNGANLYNANLNEAKLDQTDFCDATLPNGKIKNC
CHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFVYPLTTTLLTVFWLTIPVFAQSKSNSMERIKTIQRLLSTYECPSCDLREADLSEADL
CCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
SEANLLGANLQKANLKNTNLRGAILSSANLIEANLAGANLSGAIMHSTTMRLANLRDADL
CHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCC
SWADLYQAYLKQAKLNGANLYNANLNEAKLDQTDFCDATLPNGKIKNC
CHHHHHHHHHHHHCCCCCEEEECCCCHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]