Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476994

Identifier: 113476994

GI number: 113476994

Start: 5383438

End: 5383896

Strand: Reverse

Name: 113476994

Synonym: Tery_3492

Alternate gene names: NA

Gene position: 5383896-5383438 (Counterclockwise)

Preceding gene: 113476995

Following gene: 113476993

Centisome position: 69.47

GC content: 30.07

Gene sequence:

>459_bases
ATGAAAAGAAGTATGGAAAATAAATATACTTATACTCATCCTTTAGGTAGATTTGTAACTATAGATGCACTATCATTTCA
TTTAGGAATTCAATGGGATAACATTTATAAAATTAGCTGTTGGAAATATGTAATTCATGTTGTAGGAAAAGGAAAAAGTA
GGTTTGTCAGTTATGCAGATATGCCACCAGTAATAGGAGTAGAACCACCAAGAAAAGCAGACTTTGCTAAATGGCGAAAG
CGAATAAAAACTAGAAAGCAAAAGTATGTACCTAAGTTTTGGGCACAGTTTTATGTCAAAAAAATAGAGAATTCAAACTC
AATTAAAACATTATTAAATTGGAATAGTTTAGTTAATCAATGTAAGTCACTAATCTCACTAGAAGGAGTTCAAAAAATTG
ACCAGGCTGTGGTTGAAAGAAAACTTAGATTGGAGAAAATTAGTAACCTTAAGTATTAA

Upstream 100 bases:

>100_bases
TTGACAAAATACCCAAGTTATATTTAATACATATTAATATATAACTATATAGATAAAAATTTAAGACCACAATCATATAT
TAAACCTTCAGGTATATTTT

Downstream 100 bases:

>100_bases
AAAAAAACAGAAGTAAAAAAGATTATAGGTTATCTTATTTGGAGAATTGAAAATTTAATAATATAAGTATCTTCAGTTAT
CAGTAATAGTATTCAGCATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKRSMENKYTYTHPLGRFVTIDALSFHLGIQWDNIYKISCWKYVIHVVGKGKSRFVSYADMPPVIGVEPPRKADFAKWRK
RIKTRKQKYVPKFWAQFYVKKIENSNSIKTLLNWNSLVNQCKSLISLEGVQKIDQAVVERKLRLEKISNLKY

Sequences:

>Translated_152_residues
MKRSMENKYTYTHPLGRFVTIDALSFHLGIQWDNIYKISCWKYVIHVVGKGKSRFVSYADMPPVIGVEPPRKADFAKWRK
RIKTRKQKYVPKFWAQFYVKKIENSNSIKTLLNWNSLVNQCKSLISLEGVQKIDQAVVERKLRLEKISNLKY
>Mature_152_residues
MKRSMENKYTYTHPLGRFVTIDALSFHLGIQWDNIYKISCWKYVIHVVGKGKSRFVSYADMPPVIGVEPPRKADFAKWRK
RIKTRKQKYVPKFWAQFYVKKIENSNSIKTLLNWNSLVNQCKSLISLEGVQKIDQAVVERKLRLEKISNLKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17984; Mature: 17984

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSMENKYTYTHPLGRFVTIDALSFHLGIQWDNIYKISCWKYVIHVVGKGKSRFVSYAD
CCCCCCCCCEEECCCCCEEEEEHHEEEEECEECCEEEHHHHHHHHHHHCCCHHHEEECCC
MPPVIGVEPPRKADFAKWRKRIKTRKQKYVPKFWAQFYVKKIENSNSIKTLLNWNSLVNQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
CKSLISLEGVQKIDQAVVERKLRLEKISNLKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRSMENKYTYTHPLGRFVTIDALSFHLGIQWDNIYKISCWKYVIHVVGKGKSRFVSYAD
CCCCCCCCCEEECCCCCEEEEEHHEEEEECEECCEEEHHHHHHHHHHHCCCHHHEEECCC
MPPVIGVEPPRKADFAKWRKRIKTRKQKYVPKFWAQFYVKKIENSNSIKTLLNWNSLVNQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
CKSLISLEGVQKIDQAVVERKLRLEKISNLKY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA