Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is plsY

Identifier: 113476610

GI number: 113476610

Start: 4708723

End: 4709409

Strand: Reverse

Name: plsY

Synonym: Tery_3050

Alternate gene names: 113476610

Gene position: 4709409-4708723 (Counterclockwise)

Preceding gene: 113476611

Following gene: 113476601

Centisome position: 60.77

GC content: 35.23

Gene sequence:

>687_bases
ATGATTAATTGGTTAGTACTAAATGCAGTAATATTAATTGTTGCCTATCTATTGGGTGCTACTCCTAGTGGTTATTGGAT
AGGTTCTTGGTTTTATGGTGTTGACATTCGTGAACAGGGTTCTGGTTCCACAGGCGCAACTAATGTATTAAGAACTTTGG
GAAATGTGCCTGCTTTAGTTGTATTGGTTATTGATATTTTTAAGGGTGCATTAGCGATCGCTTTGGTTCGCTATATTTAC
TCTCTGGTGTTTGCTCAAAACCTAACTATTATTGCTGGAGTAACTGATATTGATACAGCAAAAGAATGGATGGTTATAAT
AGCCGGATTAATTGCTATAGTAGGTCATACTAAATCTATTTGGATTGGTTTTAAAGGAGGCAAGTCTGTTGCTTCTAGTC
TGGGTATTTTATTAGCAATCTCTTGGGTTGTTGGTTTAGGAACACTTTCTGTATTTATTGTTGTTCTTACTATTAGTCGT
ATTGTTTCTTTGAGTTCTATTATAGCTGCTATTTCTGTTTCTGGTTTGATGTTTTTCACAGGTCAACCACTTCCTTATCA
GATATTTGCTATTACTGGTGGTATATATGTGATTTGGCGTCACATTAGCAATATTGAACGACTTTTAGCTTGTAAAGAAC
CTCGAATTGGGCAAAAATTATCGACAGAACAAAAGATGAATAAGTAG

Upstream 100 bases:

>100_bases
ATCATTTAAAGTCCGAAAAACTCACTTCATTAATTATTTTTGAATACATGACTTTTGACTGGTGCGTAGCGCCATGCTAA
TTTTTTAAAGGAATAAGTTA

Downstream 100 bases:

>100_bases
GAAATAAAACTACTCAAAAAACTATCTCAATTTTAGTCTTAGCTACTTCCTATTTACTACCTTTACTTTAAATAATAATC
ATCAAACTACTAATTAAAAT

Product: acyl-phosphate glycerol-3-phosphate acyltransferase

Products: NA

Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MINWLVLNAVILIVAYLLGATPSGYWIGSWFYGVDIREQGSGSTGATNVLRTLGNVPALVVLVIDIFKGALAIALVRYIY
SLVFAQNLTIIAGVTDIDTAKEWMVIIAGLIAIVGHTKSIWIGFKGGKSVASSLGILLAISWVVGLGTLSVFIVVLTISR
IVSLSSIIAAISVSGLMFFTGQPLPYQIFAITGGIYVIWRHISNIERLLACKEPRIGQKLSTEQKMNK

Sequences:

>Translated_228_residues
MINWLVLNAVILIVAYLLGATPSGYWIGSWFYGVDIREQGSGSTGATNVLRTLGNVPALVVLVIDIFKGALAIALVRYIY
SLVFAQNLTIIAGVTDIDTAKEWMVIIAGLIAIVGHTKSIWIGFKGGKSVASSLGILLAISWVVGLGTLSVFIVVLTISR
IVSLSSIIAAISVSGLMFFTGQPLPYQIFAITGGIYVIWRHISNIERLLACKEPRIGQKLSTEQKMNK
>Mature_228_residues
MINWLVLNAVILIVAYLLGATPSGYWIGSWFYGVDIREQGSGSTGATNVLRTLGNVPALVVLVIDIFKGALAIALVRYIY
SLVFAQNLTIIAGVTDIDTAKEWMVIIAGLIAIVGHTKSIWIGFKGGKSVASSLGILLAISWVVGLGTLSVFIVVLTISR
IVSLSSIIAAISVSGLMFFTGQPLPYQIFAITGGIYVIWRHISNIERLLACKEPRIGQKLSTEQKMNK

Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP

COG id: COG0344

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the plsY family

Homologues:

Organism=Escherichia coli, GI1789439, Length=218, Percent_Identity=26.1467889908257, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PLSY_TRIEI (Q10ZX6)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_722671.1
- STRING:   Q10ZX6
- GeneID:   4244700
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_3050
- NMPDR:   fig|203124.1.peg.3876
- eggNOG:   COG0344
- HOGENOM:   HBG734487
- OMA:   VLGWKAG
- BioCyc:   TERY203124:TERY_3050-MONOMER
- HAMAP:   MF_01043
- InterPro:   IPR003811
- TIGRFAMs:   TIGR00023

Pfam domain/function: PF02660 DUF205

EC number: NA

Molecular weight: Translated: 24538; Mature: 24538

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1972365c)-; HASH(0x18681124)-; HASH(0x191976b4)-; HASH(0x172130f0)-; HASH(0x19ffeba8)-; HASH(0x182df3e0)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINWLVLNAVILIVAYLLGATPSGYWIGSWFYGVDIREQGSGSTGATNVLRTLGNVPALV
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEHCCCCCCCHHHHHHHHHCCCHHHH
VLVIDIFKGALAIALVRYIYSLVFAQNLTIIAGVTDIDTAKEWMVIIAGLIAIVGHTKSI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEE
WIGFKGGKSVASSLGILLAISWVVGLGTLSVFIVVLTISRIVSLSSIIAAISVSGLMFFT
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
GQPLPYQIFAITGGIYVIWRHISNIERLLACKEPRIGQKLSTEQKMNK
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHCCH
>Mature Secondary Structure
MINWLVLNAVILIVAYLLGATPSGYWIGSWFYGVDIREQGSGSTGATNVLRTLGNVPALV
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEHCCCCCCCHHHHHHHHHCCCHHHH
VLVIDIFKGALAIALVRYIYSLVFAQNLTIIAGVTDIDTAKEWMVIIAGLIAIVGHTKSI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEE
WIGFKGGKSVASSLGILLAISWVVGLGTLSVFIVVLTISRIVSLSSIIAAISVSGLMFFT
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
GQPLPYQIFAITGGIYVIWRHISNIERLLACKEPRIGQKLSTEQKMNK
CCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA