Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476600

Identifier: 113476600

GI number: 113476600

Start: 4687980

End: 4688210

Strand: Reverse

Name: 113476600

Synonym: Tery_3037

Alternate gene names: NA

Gene position: 4688210-4687980 (Counterclockwise)

Preceding gene: 113476601

Following gene: 113476599

Centisome position: 60.49

GC content: 29.0

Gene sequence:

>231_bases
GTGTTAGGTAAGTATTTATCTAAAAAAGTAGGGGGTTTTAAACAATATAAAAATGCACAAGTTAAAATTGCTAAATTTCA
TGGGAAACAAAAGAACATAAAAACAGATTTTATGGATAAATTATCTACTAAAATAATTAGTGAAAACCAAACAATTGATT
TTTGTAGAGGTATTATATGTTTCTTTAGTGGTCAAAAGCGTAACCCGTCCCCAAGAGGTTTGGGTCTCTAA

Upstream 100 bases:

>100_bases
ACTTTTGCTACTTTGAGTAAAAGTAATAAAATTCATGCACAAAAACTCTTAAAGAAAAAGATTAATCAGTAAGTGCCCTC
TTTCATAGGATCTGTGTAAC

Downstream 100 bases:

>100_bases
TGAATGGTTATGAAGTAATGCCGAAACCTTGTTAGAAGGAAAGGCAAAAAAATATAGCCGCAGTCATAGAGTAATTCGAC
GTTGAGAACTAACATTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MLGKYLSKKVGGFKQYKNAQVKIAKFHGKQKNIKTDFMDKLSTKIISENQTIDFCRGIICFFSGQKRNPSPRGLGL

Sequences:

>Translated_76_residues
MLGKYLSKKVGGFKQYKNAQVKIAKFHGKQKNIKTDFMDKLSTKIISENQTIDFCRGIICFFSGQKRNPSPRGLGL
>Mature_76_residues
MLGKYLSKKVGGFKQYKNAQVKIAKFHGKQKNIKTDFMDKLSTKIISENQTIDFCRGIICFFSGQKRNPSPRGLGL

Specific function: Unknown

COG id: COG0675

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8627; Mature: 8627

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKYLSKKVGGFKQYKNAQVKIAKFHGKQKNIKTDFMDKLSTKIISENQTIDFCRGIIC
CCCHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
FFSGQKRNPSPRGLGL
HCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLGKYLSKKVGGFKQYKNAQVKIAKFHGKQKNIKTDFMDKLSTKIISENQTIDFCRGIIC
CCCHHHHHHHCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
FFSGQKRNPSPRGLGL
HCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA