Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476537

Identifier: 113476537

GI number: 113476537

Start: 4614194

End: 4614649

Strand: Reverse

Name: 113476537

Synonym: Tery_2967

Alternate gene names: NA

Gene position: 4614649-4614194 (Counterclockwise)

Preceding gene: 113476538

Following gene: 113476536

Centisome position: 59.54

GC content: 32.68

Gene sequence:

>456_bases
ATGCCTGACAGTAAATTCACCTTAGATGAACTTCAACAAAAATTCAATATAATATTGACAGGCAACAAAGGAAAATTTAA
CAACTTACCAGAAGTTGCTCCTAGTCAATTTATTCTTGAAGCCTTAGATGAATATTTACCCTTAGCAGTGGCAATTGGTT
CTGAAAAAGCTCGTTCTGAATTAATAGTTGCACCAATCTTAGTGGCAATTAAAAAACATTTAAACAAACAGATAAGTTTA
TTTTCTGGCATTGAGTTTAATGTTGACATAGAACTTGGATTAAATAGTTTTGGCGATTTTATTATTAGCAATTCAACCCA
ACAATTTTTCATAGAATCGCCAGTTATTGTCTTAGTAGAAGCTAAAAACAATAATCTCAAATCTGGTTTGGCTCAATGCA
TGGCAGAAATGGTTGCTGCTCAAATTTTCAACCAACGTCAAGATAACGAGGAATGA

Upstream 100 bases:

>100_bases
TTATGTCCGGTTTAATAATTAGATTTTCGTGGATGTTGGCATAAGGCAGAAGTTTTTTTGCCATTCTTTTAACTGATAAC
TGATAACTGAATAAGAAATT

Downstream 100 bases:

>100_bases
AAAAATTTATGGAGTTATTACTACTGGAACTGTTTGGCAATTTTTAGAGTTAGAAGGTGAAGCAGTAGTATTAGATTTAC
AGGAATATTCTGTTGAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MPDSKFTLDELQQKFNIILTGNKGKFNNLPEVAPSQFILEALDEYLPLAVAIGSEKARSELIVAPILVAIKKHLNKQISL
FSGIEFNVDIELGLNSFGDFIISNSTQQFFIESPVIVLVEAKNNNLKSGLAQCMAEMVAAQIFNQRQDNEE

Sequences:

>Translated_151_residues
MPDSKFTLDELQQKFNIILTGNKGKFNNLPEVAPSQFILEALDEYLPLAVAIGSEKARSELIVAPILVAIKKHLNKQISL
FSGIEFNVDIELGLNSFGDFIISNSTQQFFIESPVIVLVEAKNNNLKSGLAQCMAEMVAAQIFNQRQDNEE
>Mature_150_residues
PDSKFTLDELQQKFNIILTGNKGKFNNLPEVAPSQFILEALDEYLPLAVAIGSEKARSELIVAPILVAIKKHLNKQISLF
SGIEFNVDIELGLNSFGDFIISNSTQQFFIESPVIVLVEAKNNNLKSGLAQCMAEMVAAQIFNQRQDNEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16771; Mature: 16640

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSKFTLDELQQKFNIILTGNKGKFNNLPEVAPSQFILEALDEYLPLAVAIGSEKARSE
CCCCCCCHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCHHHHH
LIVAPILVAIKKHLNKQISLFSGIEFNVDIELGLNSFGDFIISNSTQQFFIESPVIVLVE
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCCCEEEECCCEEEEEE
AKNNNLKSGLAQCMAEMVAAQIFNQRQDNEE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PDSKFTLDELQQKFNIILTGNKGKFNNLPEVAPSQFILEALDEYLPLAVAIGSEKARSE
CCCCCCHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCHHHHH
LIVAPILVAIKKHLNKQISLFSGIEFNVDIELGLNSFGDFIISNSTQQFFIESPVIVLVE
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCCCEEEECCCEEEEEE
AKNNNLKSGLAQCMAEMVAAQIFNQRQDNEE
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA