| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is dmpM [H]
Identifier: 113476536
GI number: 113476536
Start: 4612247
End: 4613284
Strand: Reverse
Name: dmpM [H]
Synonym: Tery_2966
Alternate gene names: 113476536
Gene position: 4613284-4612247 (Counterclockwise)
Preceding gene: 113476537
Following gene: 113476534
Centisome position: 59.53
GC content: 35.55
Gene sequence:
>1038_bases ATGTTAGGAAAAGCATCAGAATCTAAGAAAAAAATTTACCAAATAATCTACGGTTACTGGCAAAGTCAGTGCGTTTATAC TGCCACAAATTTAGGTATCCCAAATTTACTACATTATGGACCGCAAACTGTTGAAATAATAGCAGAAAAAACTGGAACAA AATCAGAAAAACTTTATGTTGTACTGCGTGCTTTAGCTCATTTAGGAATATTTGTAGAAAAGCCAGGCCGTGTTTTTGCT GCTACAGAATTATCAGAACTTTTAATGACAGATGATTCCCCATCTATAGGTCATTTTTTAATGCACATTACAGAGCCCAA TATGTGGGATAGTTGGCGAGAATTAGAAAGTGGTTTAAAGACTGGAGAAGTACCTTTTAAAATAGCTAAAGGACAGGATT TTTACACTTCTTATATGACAGAAAATCCTCAGAGCAAGAATTTGTTTAATAATGCTATGAGTTTCTTAACTGCTGAAGCT GTCGATCCATTATTTGAAGTTTATAATTTTAGTCGTTTTAAAACAGTGATGGATATAGGAGGAAATCAAGGAACATTAAT CGCTAATATTGTTAAAAAGTTTGGTTGTCAAGGAATTTTATTTGATTTACCCCATGAGGTAGAAACTGCTCCTAATAATA TCTCTAAATATGGAGTTCTTGACTCAGTAAAAATCATAGGTGGTAGTGCTTTAGAATCTTTACCAAAGGGTGCTGATGCG ATTATAATGAAGTATTTTTTATCAGTATTTAATCAGGAAGATTCAATTAAAGTGTTGACTAACTGTCGGGAAGCTCTCCC TCAAGATGGTAGGGTAATACTTTTACAAACTTTAGTTCCTTCTTTGGGAGCGCCTGTAGAATATCCCGATGGCACAATAC CTGCTTTGGCAGCAGTGCAAATGATGATTACTAACCCAGGGGGATACTGGCGCACAGAGGAGGAATACAAAAATTTGTTT GCAGCTAGCGGTTTTAAACTAGAACAAGTGGTTTATACTGGTACCAGTCTTACGGTTATGGAGTTTAGTCCCTGTTAA
Upstream 100 bases:
>100_bases TTTTTTTTACTTGGGATTAGCAATCTAAAAATAGTGATTAATATTACAAAAAAAAAGACTAAGCTGCTGTTTAAAACATT CAAATATTTAGAGGTTAATT
Downstream 100 bases:
>100_bases AGTAGCACTCAGTGGTATAGTTGCAGTCAGTAGGGACGAGTAGACAGTAATGGTAAGTTTGCAGCGCGGACTAAATTTGA GAACGGTGAGAATTTACTGA
Product: hydroxyneurosporene-O-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MLGKASESKKKIYQIIYGYWQSQCVYTATNLGIPNLLHYGPQTVEIIAEKTGTKSEKLYVVLRALAHLGIFVEKPGRVFA ATELSELLMTDDSPSIGHFLMHITEPNMWDSWRELESGLKTGEVPFKIAKGQDFYTSYMTENPQSKNLFNNAMSFLTAEA VDPLFEVYNFSRFKTVMDIGGNQGTLIANIVKKFGCQGILFDLPHEVETAPNNISKYGVLDSVKIIGGSALESLPKGADA IIMKYFLSVFNQEDSIKVLTNCREALPQDGRVILLQTLVPSLGAPVEYPDGTIPALAAVQMMITNPGGYWRTEEEYKNLF AASGFKLEQVVYTGTSLTVMEFSPC
Sequences:
>Translated_345_residues MLGKASESKKKIYQIIYGYWQSQCVYTATNLGIPNLLHYGPQTVEIIAEKTGTKSEKLYVVLRALAHLGIFVEKPGRVFA ATELSELLMTDDSPSIGHFLMHITEPNMWDSWRELESGLKTGEVPFKIAKGQDFYTSYMTENPQSKNLFNNAMSFLTAEA VDPLFEVYNFSRFKTVMDIGGNQGTLIANIVKKFGCQGILFDLPHEVETAPNNISKYGVLDSVKIIGGSALESLPKGADA IIMKYFLSVFNQEDSIKVLTNCREALPQDGRVILLQTLVPSLGAPVEYPDGTIPALAAVQMMITNPGGYWRTEEEYKNLF AASGFKLEQVVYTGTSLTVMEFSPC >Mature_345_residues MLGKASESKKKIYQIIYGYWQSQCVYTATNLGIPNLLHYGPQTVEIIAEKTGTKSEKLYVVLRALAHLGIFVEKPGRVFA ATELSELLMTDDSPSIGHFLMHITEPNMWDSWRELESGLKTGEVPFKIAKGQDFYTSYMTENPQSKNLFNNAMSFLTAEA VDPLFEVYNFSRFKTVMDIGGNQGTLIANIVKKFGCQGILFDLPHEVETAPNNISKYGVLDSVKIIGGSALESLPKGADA IIMKYFLSVFNQEDSIKVLTNCREALPQDGRVILLQTLVPSLGAPVEYPDGTIPALAAVQMMITNPGGYWRTEEEYKNLF AASGFKLEQVVYTGTSLTVMEFSPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.glaucescens multifunctional cyclase-dehydratase- 3-O-methyl transferase tcmN. Some, to bovine hydroxyindole O- methyltransferase [H]
Homologues:
Organism=Homo sapiens, GI291045181, Length=336, Percent_Identity=23.5119047619048, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI117553627, Length=336, Percent_Identity=23.5119047619048, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI291045183, Length=336, Percent_Identity=23.5119047619048, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016461 - InterPro: IPR001077 - InterPro: IPR011991 [H]
Pfam domain/function: PF00891 Methyltransf_2 [H]
EC number: =2.1.1.38 [H]
Molecular weight: Translated: 38249; Mature: 38249
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGKASESKKKIYQIIYGYWQSQCVYTATNLGIPNLLHYGPQTVEIIAEKTGTKSEKLYV CCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCHHHHHH VLRALAHLGIFVEKPGRVFAATELSELLMTDDSPSIGHFLMHITEPNMWDSWRELESGLK HHHHHHHCCEEEECCCCEEEHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHCCCC TGEVPFKIAKGQDFYTSYMTENPQSKNLFNNAMSFLTAEAVDPLFEVYNFSRFKTVMDIG CCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GNQGTLIANIVKKFGCQGILFDLPHEVETAPNNISKYGVLDSVKIIGGSALESLPKGADA CCCCHHHHHHHHHHCCCEEEECCCCHHHCCCCCCHHHCCHHHHHHHCCHHHHHCCCCHHH IIMKYFLSVFNQEDSIKVLTNCREALPQDGRVILLQTLVPSLGAPVEYPDGTIPALAAVQ HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHH MMITNPGGYWRTEEEYKNLFAASGFKLEQVVYTGTSLTVMEFSPC HEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCEEEEEEECCC >Mature Secondary Structure MLGKASESKKKIYQIIYGYWQSQCVYTATNLGIPNLLHYGPQTVEIIAEKTGTKSEKLYV CCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCHHHHHH VLRALAHLGIFVEKPGRVFAATELSELLMTDDSPSIGHFLMHITEPNMWDSWRELESGLK HHHHHHHCCEEEECCCCEEEHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHCCCC TGEVPFKIAKGQDFYTSYMTENPQSKNLFNNAMSFLTAEAVDPLFEVYNFSRFKTVMDIG CCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GNQGTLIANIVKKFGCQGILFDLPHEVETAPNNISKYGVLDSVKIIGGSALESLPKGADA CCCCHHHHHHHHHHCCCEEEECCCCHHHCCCCCCHHHCCHHHHHHHCCHHHHHCCCCHHH IIMKYFLSVFNQEDSIKVLTNCREALPQDGRVILLQTLVPSLGAPVEYPDGTIPALAAVQ HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHH MMITNPGGYWRTEEEYKNLFAASGFKLEQVVYTGTSLTVMEFSPC HEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1756982 [H]