Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is dmpM [H]

Identifier: 113476536

GI number: 113476536

Start: 4612247

End: 4613284

Strand: Reverse

Name: dmpM [H]

Synonym: Tery_2966

Alternate gene names: 113476536

Gene position: 4613284-4612247 (Counterclockwise)

Preceding gene: 113476537

Following gene: 113476534

Centisome position: 59.53

GC content: 35.55

Gene sequence:

>1038_bases
ATGTTAGGAAAAGCATCAGAATCTAAGAAAAAAATTTACCAAATAATCTACGGTTACTGGCAAAGTCAGTGCGTTTATAC
TGCCACAAATTTAGGTATCCCAAATTTACTACATTATGGACCGCAAACTGTTGAAATAATAGCAGAAAAAACTGGAACAA
AATCAGAAAAACTTTATGTTGTACTGCGTGCTTTAGCTCATTTAGGAATATTTGTAGAAAAGCCAGGCCGTGTTTTTGCT
GCTACAGAATTATCAGAACTTTTAATGACAGATGATTCCCCATCTATAGGTCATTTTTTAATGCACATTACAGAGCCCAA
TATGTGGGATAGTTGGCGAGAATTAGAAAGTGGTTTAAAGACTGGAGAAGTACCTTTTAAAATAGCTAAAGGACAGGATT
TTTACACTTCTTATATGACAGAAAATCCTCAGAGCAAGAATTTGTTTAATAATGCTATGAGTTTCTTAACTGCTGAAGCT
GTCGATCCATTATTTGAAGTTTATAATTTTAGTCGTTTTAAAACAGTGATGGATATAGGAGGAAATCAAGGAACATTAAT
CGCTAATATTGTTAAAAAGTTTGGTTGTCAAGGAATTTTATTTGATTTACCCCATGAGGTAGAAACTGCTCCTAATAATA
TCTCTAAATATGGAGTTCTTGACTCAGTAAAAATCATAGGTGGTAGTGCTTTAGAATCTTTACCAAAGGGTGCTGATGCG
ATTATAATGAAGTATTTTTTATCAGTATTTAATCAGGAAGATTCAATTAAAGTGTTGACTAACTGTCGGGAAGCTCTCCC
TCAAGATGGTAGGGTAATACTTTTACAAACTTTAGTTCCTTCTTTGGGAGCGCCTGTAGAATATCCCGATGGCACAATAC
CTGCTTTGGCAGCAGTGCAAATGATGATTACTAACCCAGGGGGATACTGGCGCACAGAGGAGGAATACAAAAATTTGTTT
GCAGCTAGCGGTTTTAAACTAGAACAAGTGGTTTATACTGGTACCAGTCTTACGGTTATGGAGTTTAGTCCCTGTTAA

Upstream 100 bases:

>100_bases
TTTTTTTTACTTGGGATTAGCAATCTAAAAATAGTGATTAATATTACAAAAAAAAAGACTAAGCTGCTGTTTAAAACATT
CAAATATTTAGAGGTTAATT

Downstream 100 bases:

>100_bases
AGTAGCACTCAGTGGTATAGTTGCAGTCAGTAGGGACGAGTAGACAGTAATGGTAAGTTTGCAGCGCGGACTAAATTTGA
GAACGGTGAGAATTTACTGA

Product: hydroxyneurosporene-O-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MLGKASESKKKIYQIIYGYWQSQCVYTATNLGIPNLLHYGPQTVEIIAEKTGTKSEKLYVVLRALAHLGIFVEKPGRVFA
ATELSELLMTDDSPSIGHFLMHITEPNMWDSWRELESGLKTGEVPFKIAKGQDFYTSYMTENPQSKNLFNNAMSFLTAEA
VDPLFEVYNFSRFKTVMDIGGNQGTLIANIVKKFGCQGILFDLPHEVETAPNNISKYGVLDSVKIIGGSALESLPKGADA
IIMKYFLSVFNQEDSIKVLTNCREALPQDGRVILLQTLVPSLGAPVEYPDGTIPALAAVQMMITNPGGYWRTEEEYKNLF
AASGFKLEQVVYTGTSLTVMEFSPC

Sequences:

>Translated_345_residues
MLGKASESKKKIYQIIYGYWQSQCVYTATNLGIPNLLHYGPQTVEIIAEKTGTKSEKLYVVLRALAHLGIFVEKPGRVFA
ATELSELLMTDDSPSIGHFLMHITEPNMWDSWRELESGLKTGEVPFKIAKGQDFYTSYMTENPQSKNLFNNAMSFLTAEA
VDPLFEVYNFSRFKTVMDIGGNQGTLIANIVKKFGCQGILFDLPHEVETAPNNISKYGVLDSVKIIGGSALESLPKGADA
IIMKYFLSVFNQEDSIKVLTNCREALPQDGRVILLQTLVPSLGAPVEYPDGTIPALAAVQMMITNPGGYWRTEEEYKNLF
AASGFKLEQVVYTGTSLTVMEFSPC
>Mature_345_residues
MLGKASESKKKIYQIIYGYWQSQCVYTATNLGIPNLLHYGPQTVEIIAEKTGTKSEKLYVVLRALAHLGIFVEKPGRVFA
ATELSELLMTDDSPSIGHFLMHITEPNMWDSWRELESGLKTGEVPFKIAKGQDFYTSYMTENPQSKNLFNNAMSFLTAEA
VDPLFEVYNFSRFKTVMDIGGNQGTLIANIVKKFGCQGILFDLPHEVETAPNNISKYGVLDSVKIIGGSALESLPKGADA
IIMKYFLSVFNQEDSIKVLTNCREALPQDGRVILLQTLVPSLGAPVEYPDGTIPALAAVQMMITNPGGYWRTEEEYKNLF
AASGFKLEQVVYTGTSLTVMEFSPC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.glaucescens multifunctional cyclase-dehydratase- 3-O-methyl transferase tcmN. Some, to bovine hydroxyindole O- methyltransferase [H]

Homologues:

Organism=Homo sapiens, GI291045181, Length=336, Percent_Identity=23.5119047619048, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI117553627, Length=336, Percent_Identity=23.5119047619048, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI291045183, Length=336, Percent_Identity=23.5119047619048, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016461
- InterPro:   IPR001077
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00891 Methyltransf_2 [H]

EC number: =2.1.1.38 [H]

Molecular weight: Translated: 38249; Mature: 38249

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKASESKKKIYQIIYGYWQSQCVYTATNLGIPNLLHYGPQTVEIIAEKTGTKSEKLYV
CCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCHHHHHH
VLRALAHLGIFVEKPGRVFAATELSELLMTDDSPSIGHFLMHITEPNMWDSWRELESGLK
HHHHHHHCCEEEECCCCEEEHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHCCCC
TGEVPFKIAKGQDFYTSYMTENPQSKNLFNNAMSFLTAEAVDPLFEVYNFSRFKTVMDIG
CCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNQGTLIANIVKKFGCQGILFDLPHEVETAPNNISKYGVLDSVKIIGGSALESLPKGADA
CCCCHHHHHHHHHHCCCEEEECCCCHHHCCCCCCHHHCCHHHHHHHCCHHHHHCCCCHHH
IIMKYFLSVFNQEDSIKVLTNCREALPQDGRVILLQTLVPSLGAPVEYPDGTIPALAAVQ
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHH
MMITNPGGYWRTEEEYKNLFAASGFKLEQVVYTGTSLTVMEFSPC
HEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCEEEEEEECCC
>Mature Secondary Structure
MLGKASESKKKIYQIIYGYWQSQCVYTATNLGIPNLLHYGPQTVEIIAEKTGTKSEKLYV
CCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCHHHHHH
VLRALAHLGIFVEKPGRVFAATELSELLMTDDSPSIGHFLMHITEPNMWDSWRELESGLK
HHHHHHHCCEEEECCCCEEEHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHCCCC
TGEVPFKIAKGQDFYTSYMTENPQSKNLFNNAMSFLTAEAVDPLFEVYNFSRFKTVMDIG
CCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNQGTLIANIVKKFGCQGILFDLPHEVETAPNNISKYGVLDSVKIIGGSALESLPKGADA
CCCCHHHHHHHHHHCCCEEEECCCCHHHCCCCCCHHHCCHHHHHHHCCHHHHHCCCCHHH
IIMKYFLSVFNQEDSIKVLTNCREALPQDGRVILLQTLVPSLGAPVEYPDGTIPALAAVQ
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCCCCCHHHHHHHH
MMITNPGGYWRTEEEYKNLFAASGFKLEQVVYTGTSLTVMEFSPC
HEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1756982 [H]