| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476416
Identifier: 113476416
GI number: 113476416
Start: 4398690
End: 4398956
Strand: Reverse
Name: 113476416
Synonym: Tery_2830
Alternate gene names: NA
Gene position: 4398956-4398690 (Counterclockwise)
Preceding gene: 113476420
Following gene: 113476412
Centisome position: 56.76
GC content: 40.07
Gene sequence:
>267_bases TTGGTTTTTGAGCGGCGATCGCTACTGGGGAATTTTTATCTTATCAGTTGTCTTTTGAAGTTCCTGGATGGGCAAAAGTT GGATGTATTGTTTGACTGTTTTTTTGAGCGGCGATCGCTACTGGGGAATTTTTATCTCATATCAAATGCCCTGGGTTCTG AAGGGTCTTATTCTGTGGTTCATTATGCAATGGCTATGGGCAAATGCCAGAAACCCCCTACAATAATGCTAAATAACACT GATGCTGTCATGTTTTATTTAACCTAA
Upstream 100 bases:
>100_bases TGGGATAAATAGTTACCAATAGCACTGTTGCTAGCTCCCAAAAATTAATGAGTTATCTGTTGAGGTTCCTAGTAGGGTAA AGGTTGGATGTATTATTTGA
Downstream 100 bases:
>100_bases TAAGTTCTCTTGACTACAAGATGTGGTTCTATGGGTAGGGCCAAAGTTCTACTACACACTACATGTTTCATCAGCCTAAT ATTATAGGGGGTTAACAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MVFERRSLLGNFYLISCLLKFLDGQKLDVLFDCFFERRSLLGNFYLISNALGSEGSYSVVHYAMAMGKCQKPPTIMLNNT DAVMFYLT
Sequences:
>Translated_88_residues MVFERRSLLGNFYLISCLLKFLDGQKLDVLFDCFFERRSLLGNFYLISNALGSEGSYSVVHYAMAMGKCQKPPTIMLNNT DAVMFYLT >Mature_88_residues MVFERRSLLGNFYLISCLLKFLDGQKLDVLFDCFFERRSLLGNFYLISNALGSEGSYSVVHYAMAMGKCQKPPTIMLNNT DAVMFYLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10079; Mature: 10079
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFERRSLLGNFYLISCLLKFLDGQKLDVLFDCFFERRSLLGNFYLISNALGSEGSYSVV CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHH HYAMAMGKCQKPPTIMLNNTDAVMFYLT HHHHHHHCCCCCCEEEEECCCEEEEEEC >Mature Secondary Structure MVFERRSLLGNFYLISCLLKFLDGQKLDVLFDCFFERRSLLGNFYLISNALGSEGSYSVV CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEECCCCCCCCHHHH HYAMAMGKCQKPPTIMLNNTDAVMFYLT HHHHHHHCCCCCCEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA