Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476412

Identifier: 113476412

GI number: 113476412

Start: 4391624

End: 4391959

Strand: Reverse

Name: 113476412

Synonym: Tery_2826

Alternate gene names: NA

Gene position: 4391959-4391624 (Counterclockwise)

Preceding gene: 113476416

Following gene: 113476411

Centisome position: 56.67

GC content: 29.17

Gene sequence:

>336_bases
ATGAAAACAGAAAATGAAGTTGTTTGGAGTGGTAGATCCAATATAAGTTCTTTTGTTATGATAGAAGAAGAATTAGAAAT
ACTAACAAGATGGATCCTTGAAGATAAGTTTCGTTTAGTAACTATTTTTGGTTTAAAAGGTATCGGCAAGAATTTTCTTT
CTGTTAAACTTACTGAAAAAATCAAGGATAAGTTTGAGTTTGTTATTTGGCGATCGCTTTCTTTAGACCCAAAAATTCGG
CTTTTATTGACTTGGTTGATTTTTACACAAGTCCTTAATAAATTTCAAATAATCTCAACCAGAAAACTTTTATTTAGTAA
CTTCAACAAATGCTAG

Upstream 100 bases:

>100_bases
CAATTTTTAACTCAATATCAGGTCAAAAAAAATTAATTATCAGGCAAAAAAAAAGGGAGGTAACTATGACATAGAAAAAG
AAAAAAATAGACCTAATAAA

Downstream 100 bases:

>100_bases
AAATTCCAAACAAAAATCAAGACATTCATCGGTTTACTATTTCTAGGGTAGTACGTTTTTTAGTAGGAGTTATATTATGT
TGTTTATTAATTCTGACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKTENEVVWSGRSNISSFVMIEEELEILTRWILEDKFRLVTIFGLKGIGKNFLSVKLTEKIKDKFEFVIWRSLSLDPKIR
LLLTWLIFTQVLNKFQIISTRKLLFSNFNKC

Sequences:

>Translated_111_residues
MKTENEVVWSGRSNISSFVMIEEELEILTRWILEDKFRLVTIFGLKGIGKNFLSVKLTEKIKDKFEFVIWRSLSLDPKIR
LLLTWLIFTQVLNKFQIISTRKLLFSNFNKC
>Mature_111_residues
MKTENEVVWSGRSNISSFVMIEEELEILTRWILEDKFRLVTIFGLKGIGKNFLSVKLTEKIKDKFEFVIWRSLSLDPKIR
LLLTWLIFTQVLNKFQIISTRKLLFSNFNKC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13203; Mature: 13203

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTENEVVWSGRSNISSFVMIEEELEILTRWILEDKFRLVTIFGLKGIGKNFLSVKLTEK
CCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHEEEHHHH
IKDKFEFVIWRSLSLDPKIRLLLTWLIFTQVLNKFQIISTRKLLFSNFNKC
HHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTENEVVWSGRSNISSFVMIEEELEILTRWILEDKFRLVTIFGLKGIGKNFLSVKLTEK
CCCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHEEEHHHH
IKDKFEFVIWRSLSLDPKIRLLLTWLIFTQVLNKFQIISTRKLLFSNFNKC
HHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA